FFCP PHASE1:Hg19::chr22:39097527..39097568,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:39097527..39097568,-
|short_description=p13@JOSD1
|description=CAGE_peak_13_at_JOSD1_5end
|association_with_transcript=0bp_to_ENST00000417712_5end
|Entre...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9929 | |EntrezGene=9929 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28953 | |HGNC=28953 | ||
|TSSclassifier=strong | |||
|UniProt=B0QY55 | |UniProt=B0QY55 | ||
|association_with_transcript=0bp_to_ENST00000417712_5end | |||
|cluster_id=chr22:39097527..39097568,- | |||
|description=CAGE_peak_13_at_JOSD1_5end | |||
|id=chr22:39097527..39097568,- | |||
|ontology_enrichment_celltype=CL:0000738!3.22e-13!140;CL:0000860!2.05e-10!45;CL:0000037!5.47e-10!172;CL:0000566!5.47e-10!172;CL:0000988!6.42e-09!182;CL:0000766!1.32e-08!76;CL:0002057!3.18e-08!42;CL:0002032!7.46e-08!165;CL:0000837!7.46e-08!165;CL:0000451!1.15e-07!10;CL:0002087!1.50e-07!119;CL:0002009!3.60e-07!65;CL:0000763!3.62e-07!112;CL:0000049!3.62e-07!112;CL:0002031!4.65e-07!124;CL:0000557!8.07e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000453;1.46e-12;5!CL:0000451;2.50e-12;10!CL:0000624;4.09e-11;6!CL:0000990;1.18e-10;8!CL:0000791;3.48e-10;18!CL:0000789;3.48e-10;18!CL:0002419;3.48e-10;18!CL:0000771;5.94e-09;2!CL:0000094;7.18e-08;8!CL:0000084;4.87e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.96e-20,136;CL:0000037,1.19e-14,168;CL:0000988,1.54e-13,177;CL:0002032,3.84e-13,161;CL:0000837,3.84e-13,161;CL:0000453,5.06e-13,5;CL:0000451,1.34e-12,10;CL:0000624,2.62e-11,6;CL:0000990,6.10e-11,8;CL:0002087,8.71e-11,115;CL:0000791,2.97e-10,18;CL:0000789,2.97e-10,18;CL:0002420,2.97e-10,18;CL:0002419,2.97e-10,18;CL:0000790,2.97e-10,18;CL:0002031,3.44e-10,120;CL:0000771,5.75e-09,2;CL:0000838,1.22e-08,52;CL:0000542,1.98e-08,53;CL:0000051,1.98e-08,53;CL:0000094,5.38e-08,8;CL:0000084,4.37e-07,25;CL:0000827,4.37e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;3.48e-10;18 | |||
|ontology_enrichment_disease=DOID:0050687!9.16e-12!143;DOID:305!1.06e-11!106;DOID:162!5.55e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.08e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.78e-07;9!UBERON:0001557;8.78e-07;9 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0.263766978228454,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0,0.619264493264304,0,0,0,0,0,0.293600439334847,0,0.401088894940283,1.08505435357926,0,0,0,0,0.377875943688809,0,0.232429036905685,1.23350366406548,0.619412741790207,0.28769239232215,0.256160706529101,0,1.37898272294647,0.645484683583826,0,1.50593871634084,0.272906150057846,0.224723484445085,1.22433556948361,1.28371610830437,1.27867425159808,0,0.199463657621632,0,0,0.56738522469114,0,0.251248665256743,1.0429658368404,0,0,0.368277635987565,0,0,0.212604299965044,0,0,0,0.16072558669708,0.285012743741249,0.39783335439818,0,0,0,0,0.426730222566507,0,0,0,0,4.55370375287559,2.34894875748376,3.44045905312706,0,1.12101712596307,0,2.9506465517075,4.32311839024081,3.28962398399215,0,0,0.946895611469467,0,0,0.883817722424512,0.221533894583621,0,0,0,0,0,0,1.33457906845854,0.802622484269139,0,0,1.91610246800961,0.68725489096526,0.253019692019503,0,0,0,0,0,0,0,0,2.82249440514625,2.13952156626806,2.02754165435919,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0,0,0.370784442784429,0,0.174129737299267,0,2.14641561874808,2.28797964312051,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,1.31780417436063,3.87780264148325,0,0,0.12663051166458,0,0,0,0,1.06748995729705,0,0,0,0,0.302714855289863,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,1.0647612003586,0.168584690078102,1.20505514941741,1.32352767278873,1.96091499683166,0.474541238222193,0.943819157121151,0.196221465125346,0.769494313892781,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0.100528972411631,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18218456121156,1.94064817373566,0.898401253958239,0,0,0,0,0,1.49801404789436,0,0.828831026872071,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,0.862856803274467,1.49418580924822,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0.541892875087706,0,0,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,2.20536194382929,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.47748896947538,0,0,0,0,0.445234820091624,0,0,0.19924798825107,0,0,0.20453736500431,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,2.86470537193757,0.962059999958153,0,0,0.508507300585533,0.945550727071745,0.344743373241465,0,0,0,0,0,0,0,0.219385397153973,0.435753854075961,0.557694977114413,0,0,0,0.987334088507493,1.62971057883012,1.27600463892768,0,0,0,0,0,0.225595660617181,0,0,0.189753732724185,0.158936578980379,0,0.163232808159148,0.141353071433941,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0.901940516486955,0.207376382794494,0,0,0,0,0,0,1.90915712168644,0.489961987071888,0.435296032902013,0.17472666824203,0,2.70917727609438,3.43519790305072,2.79192553980911,0,0.0882561266915003,0,0.274083849293502,0,0.0633107959558787,1.17330829640882,0,0,0.599428828746391,0,0,0,0.14405479798815,0.248505071130865,0.471388069233591,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0.160753148465019,0.137539436597234,0.83088067605837,3.14963448172101,0.77380195455795,0,0,0.0788057072991982,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0,1.40963004463334,0,0,0,0,0.592834895693833,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.124192805882767,0,0,0,0.285465333544967,0,0,0.144921028610825,0,0.467426619694449,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0,0.414706207840855,0.265841714557995,0,0,0.380805212168795,0,0.181848659202559,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0.607719912354764,0.276516872303462,1.55888247071511,1.86010776438708,1.96278473107013,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0.212574920101683,0.247871528518004,0.558644917973244,0,0,0,0.705351887381368,0.3062454773532,0,0,0,0,0,0,0,0,0,0.353909170043221,0,0.115525666150338,0,0,0,0,0.20170506870352,0,1.30953347240711,0,0.591424344868181,0,0,0,0,0,1.09651553371436,0,0,0.127762427639595,0,0,0,0,0.266107110487916,0,0,0,0,0.118193840883968,0.333694205676207,0,0,0.280272163313789,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0.0852134047591577,0,0.9164274741762,0.62041277132864,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499705779624645,0,0.352894871715692,0.240724100067505,0,0,0,0.473314686579554,0,0,0,0,0,0,0,0,0.126698501011437,0.305966489225945,0,0.0918948995348449,0.250707539292375,0.151557396436479,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0.0673520530145875,0,0,0.488419611665847,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0.263766978228454,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0,0.619264493264304,0,0,0,0,0,0.293600439334847,0,0.401088894940283,1.08505435357926,0,0,0,0,0.377875943688809,0,0.232429036905685,1.23350366406548,0.619412741790207,0.28769239232215,0.256160706529101,0,1.37898272294647,0.645484683583826,0,1.50593871634084,0.272906150057846,0.224723484445085,1.22433556948361,1.28371610830437,1.27867425159808,0,0.199463657621632,0,0,0.56738522469114,0,0.251248665256743,1.0429658368404,0,0,0.368277635987565,0,0,0.212604299965044,0,0,0,0.16072558669708,0.285012743741249,0.39783335439818,0,0,0,0,0.426730222566507,0,0,0,0,4.55370375287559,2.34894875748376,3.44045905312706,0,1.12101712596307,0,2.9506465517075,4.32311839024081,3.28962398399215,0,0,0.946895611469467,0,0,0.883817722424512,0.221533894583621,0,0,0,0,0,0,1.33457906845854,0.802622484269139,0,0,1.91610246800961,0.68725489096526,0.253019692019503,0,0,0,0,0,0,0,0,2.82249440514625,2.13952156626806,2.02754165435919,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0,0,0.370784442784429,0,0.174129737299267,0,2.14641561874808,2.28797964312051,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,1.31780417436063,3.87780264148325,0,0,0.12663051166458,0,0,0,0,1.06748995729705,0,0,0,0,0.302714855289863,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,1.0647612003586,0.168584690078102,1.20505514941741,1.32352767278873,1.96091499683166,0.474541238222193,0.943819157121151,0.196221465125346,0.769494313892781,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0.100528972411631,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18218456121156,1.94064817373566,0.898401253958239,0,0,0,0,0,1.49801404789436,0,0.828831026872071,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,0.862856803274467,1.49418580924822,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0.541892875087706,0,0,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,2.20536194382929,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.47748896947538,0,0,0,0,0.445234820091624,0,0,0.19924798825107,0,0,0.20453736500431,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,2.86470537193757,0.962059999958153,0,0,0.508507300585533,0.945550727071745,0.344743373241465,0,0,0,0,0,0,0,0.219385397153973,0.435753854075961,0.557694977114413,0,0,0,0.987334088507493,1.62971057883012,1.27600463892768,0,0,0,0,0,0.225595660617181,0,0,0.189753732724185,0.158936578980379,0,0.163232808159148,0.141353071433941,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0.901940516486955,0.207376382794494,0,0,0,0,0,0,1.90915712168644,0.489961987071888,0.435296032902013,0.17472666824203,0,2.70917727609438,3.43519790305072,2.79192553980911,0,0.0882561266915003,0,0.274083849293502,0,0.0633107959558787,1.17330829640882,0,0,0.599428828746391,0,0,0,0.14405479798815,0.248505071130865,0.471388069233591,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0.160753148465019,0.137539436597234,0.83088067605837,3.14963448172101,0.77380195455795,0,0,0.0788057072991982,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0,1.40963004463334,0,0,0,0,0.592834895693833,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.124192805882767,0,0,0,0.285465333544967,0,0,0.144921028610825,0,0.467426619694449,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0,0.414706207840855,0.265841714557995,0,0,0.380805212168795,0,0.181848659202559,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0.607719912354764,0.276516872303462,1.55888247071511,1.86010776438708,1.96278473107013,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0.212574920101683,0.247871528518004,0.558644917973244,0,0,0,0.705351887381368,0.3062454773532,0,0,0,0,0,0,0,0,0,0.353909170043221,0,0.115525666150338,0,0,0,0,0.20170506870352,0,1.30953347240711,0,0.591424344868181,0,0,0,0,0,1.09651553371436,0,0,0.127762427639595,0,0,0,0,0.266107110487916,0,0,0,0,0.118193840883968,0.333694205676207,0,0,0.280272163313789,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0.0852134047591577,0,0.9164274741762,0.62041277132864,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499705779624645,0,0.352894871715692,0.240724100067505,0,0,0,0.473314686579554,0,0,0,0,0,0,0,0,0.126698501011437,0.305966489225945,0,0.0918948995348449,0.250707539292375,0.151557396436479,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0.0673520530145875,0,0,0.488419611665847,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p13@JOSD1 | |||
}} | }} |
Latest revision as of 16:27, 24 September 2015
Short description: | p13@JOSD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_JOSD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000417712_5end |
EntrezGene: | JOSD1 |
HGNC: | 28953 |
UniProt: | B0QY55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.96e-20 | 136 |
hematopoietic stem cell | 1.19e-14 | 168 |
hematopoietic cell | 1.54e-13 | 177 |
hematopoietic oligopotent progenitor cell | 3.84e-13 | 161 |
hematopoietic multipotent progenitor cell | 3.84e-13 | 161 |
Langerhans cell | 5.06e-13 | 5 |
dendritic cell | 1.34e-12 | 10 |
CD4-positive, alpha-beta T cell | 2.62e-11 | 6 |
conventional dendritic cell | 6.10e-11 | 8 |
nongranular leukocyte | 8.71e-11 | 115 |
mature alpha-beta T cell | 2.97e-10 | 18 |
alpha-beta T cell | 2.97e-10 | 18 |
immature T cell | 2.97e-10 | 18 |
mature T cell | 2.97e-10 | 18 |
immature alpha-beta T cell | 2.97e-10 | 18 |
hematopoietic lineage restricted progenitor cell | 3.44e-10 | 120 |
eosinophil | 5.75e-09 | 2 |
lymphoid lineage restricted progenitor cell | 1.22e-08 | 52 |
lymphocyte | 1.98e-08 | 53 |
common lymphoid progenitor | 1.98e-08 | 53 |
granulocyte | 5.38e-08 | 8 |
T cell | 4.37e-07 | 25 |
pro-T cell | 4.37e-07 | 25 |