FFCP PHASE1:Hg19::chr12:8799724..8799753,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8076 | |EntrezGene=8076 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29673 | |HGNC=29673 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=367bp_to_AL833019_5end | |association_with_transcript=367bp_to_AL833019_5end | ||
|cluster_id=chr12:8799724..8799753,- | |||
|coexpression_cluster_id=C628 | |coexpression_cluster_id=C628 | ||
|description=CAGE_peak_9_at_MFAP5_5end | |description=CAGE_peak_9_at_MFAP5_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002334!1.72e-14!12;CL:0000057!4.43e-12!75;CL:0000136!6.15e-11!15;CL:0000055!1.28e-08!180;CL:1000306!8.26e-07!4;CL:0002547!8.26e-07!4 | |ontology_enrichment_celltype=CL:0002334!1.72e-14!12;CL:0000057!4.43e-12!75;CL:0000136!6.15e-11!15;CL:0000055!1.28e-08!180;CL:1000306!8.26e-07!4;CL:0002547!8.26e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002334;4.10e-23;12!CL:0000135;9.04e-15;3!CL:0000388;9.04e-15;3!CL:0002615;9.91e-15;3!CL:0002579;1.75e-14;3!CL:0002580;1.91e-14;3!CL:0000136;1.74e-12;13!CL:0002617;2.32e-10;2!CL:0000214;2.75e-07;3!CL:0002541;4.26e-07;3 | |ontology_enrichment_celltype_v019=CL:0002334;4.10e-23;12!CL:0000135;9.04e-15;3!CL:0000388;9.04e-15;3!CL:0002615;9.91e-15;3!CL:0002579;1.75e-14;3!CL:0002580;1.91e-14;3!CL:0000136;1.74e-12;13!CL:0002617;2.32e-10;2!CL:0000214;2.75e-07;3!CL:0002541;4.26e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002334,5.14e-23,12;CL:0000057,1.36e-16,76;CL:0000135,7.38e-15,3;CL:0000388,7.38e-15,3;CL:0002615,1.11e-14,3;CL:0002580,1.75e-14,3;CL:0002579,1.92e-14,3;CL:0000136,3.92e-14,15;CL:0002617,2.32e-10,2;CL:0000214,2.92e-07,3;CL:0002541,3.95e-07,3;CL:0000134,4.53e-07,354;CL:0002320,8.59e-07,361 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.40e-11!14;UBERON:0000158!2.40e-11!14;UBERON:0003688!8.28e-11!6;UBERON:0002358!8.28e-11!6;UBERON:0003684!8.28e-11!6;UBERON:0001178!8.28e-11!6;UBERON:0004923!1.16e-10!57;UBERON:0003124!3.45e-10!7;UBERON:0004457!1.42e-08!12;UBERON:0000042!1.42e-08!12;UBERON:0004573!1.08e-07!33;UBERON:0004571!1.08e-07!33;UBERON:0001013!3.98e-07!14;UBERON:0001637!6.70e-07!42;UBERON:0003509!6.70e-07!42;UBERON:0004572!6.70e-07!42;UBERON:0002199!8.10e-07!45;UBERON:0002416!8.10e-07!45;UBERON:0000415!8.26e-07!4;UBERON:0007240!8.26e-07!4;UBERON:0005742!8.26e-07!4;UBERON:0005734!8.26e-07!4;UBERON:0004664!8.26e-07!4;UBERON:0004663!8.26e-07!4 | |ontology_enrichment_uberon=UBERON:0005631!2.40e-11!14;UBERON:0000158!2.40e-11!14;UBERON:0003688!8.28e-11!6;UBERON:0002358!8.28e-11!6;UBERON:0003684!8.28e-11!6;UBERON:0001178!8.28e-11!6;UBERON:0004923!1.16e-10!57;UBERON:0003124!3.45e-10!7;UBERON:0004457!1.42e-08!12;UBERON:0000042!1.42e-08!12;UBERON:0004573!1.08e-07!33;UBERON:0004571!1.08e-07!33;UBERON:0001013!3.98e-07!14;UBERON:0001637!6.70e-07!42;UBERON:0003509!6.70e-07!42;UBERON:0004572!6.70e-07!42;UBERON:0002199!8.10e-07!45;UBERON:0002416!8.10e-07!45;UBERON:0000415!8.26e-07!4;UBERON:0007240!8.26e-07!4;UBERON:0005742!8.26e-07!4;UBERON:0005734!8.26e-07!4;UBERON:0004664!8.26e-07!4;UBERON:0004663!8.26e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.59e-32;9!UBERON:0000042;4.59e-32;9!UBERON:0003688;1.92e-27;6!UBERON:0002358;1.92e-27;6!UBERON:0003684;1.92e-27;6!UBERON:0001178;1.92e-27;6!UBERON:0007846;9.04e-15;3!UBERON:0000043;9.04e-15;3!UBERON:0007845;9.04e-15;3!UBERON:0000310;2.19e-11;10!UBERON:0005406;1.46e-10;2!UBERON:0001443;2.54e-10;11!UBERON:0004923;6.72e-08;55!UBERON:0006915;2.75e-07;3!UBERON:0007616;2.75e-07;3!UBERON:0002217;2.75e-07;3!UBERON:0002018;2.75e-07;3!UBERON:0003124;4.26e-07;3!UBERON:0000920;4.26e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0004457;4.59e-32;9!UBERON:0000042;4.59e-32;9!UBERON:0003688;1.92e-27;6!UBERON:0002358;1.92e-27;6!UBERON:0003684;1.92e-27;6!UBERON:0001178;1.92e-27;6!UBERON:0007846;9.04e-15;3!UBERON:0000043;9.04e-15;3!UBERON:0007845;9.04e-15;3!UBERON:0000310;2.19e-11;10!UBERON:0005406;1.46e-10;2!UBERON:0001443;2.54e-10;11!UBERON:0004923;6.72e-08;55!UBERON:0006915;2.75e-07;3!UBERON:0007616;2.75e-07;3!UBERON:0002217;2.75e-07;3!UBERON:0002018;2.75e-07;3!UBERON:0003124;4.26e-07;3!UBERON:0000920;4.26e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.37e-27,6;UBERON:0002358,2.37e-27,6;UBERON:0003684,2.37e-27,6;UBERON:0001178,2.37e-27,6;UBERON:0004457,1.25e-23,12;UBERON:0000042,1.25e-23,12;UBERON:0007846,7.38e-15,3;UBERON:0000043,7.38e-15,3;UBERON:0007845,7.38e-15,3;UBERON:0004923,8.58e-14,66;UBERON:0000310,2.10e-11,10;UBERON:0005406,1.46e-10,2;UBERON:0003124,2.26e-10,7;UBERON:0001443,2.45e-10,11;UBERON:0002384,8.81e-08,371;UBERON:0005631,1.06e-07,14;UBERON:0000158,1.06e-07,14;UBERON:0006915,2.92e-07,3;UBERON:0007616,2.92e-07,3;UBERON:0002217,2.92e-07,3;UBERON:0002018,2.92e-07,3;UBERON:0000920,3.95e-07,3 | |||
|phase1_expression=3.08853244759946,6.63711624062048,2.53717927372748,6.00439790118782,7.15137751083661,10.4680622892044,0,0.631719873426831,0.261185628199839,0,0,0,0.791300934685361,0,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,2.27934920996244,0.794455084879313,2.58152958673932,0.354668382198357,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,1.79389635688862,1.92201649936711,0.423863802319124,0.600182192168805,0,0.772921620136887,1.11670113798954,1.0126579934476,0.292311015483596,0.504867548488229,0.184099797284599,0,1.77504796258307,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0.354920400119532,0.337169380156203,0,0.330881918197182,0,0,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49959486773086,0,0,0,0,0,0,0.579125226670317,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,1.5156378572313,1.66435439510497,0.604780586659361,2.97729369382532,4.45039722535381,4.77122160536225,3.58789617915963,2.04682899626681,6.27330292460069,5.93672265779964,0.308419387605311,1.06537035187876,0.0821271560138091,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.193341436584244,0,0,0,0,0,0.0852266274161009,0.445160178233687,0,0,0,0,0,1.25924938732256,0.6970372701606,0,0,1.73986598415015,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0.78494864019923,0,0,0,0,0,0,0,0.974853958525138,0,0,0,1.13008116620243,0,0.66343897524122,0.876901770507525,0,0,0,0,0.281695602532241,0,0,0,0,6.12212142363226,6.25660296623814,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,1.78178808499583,0.614321404198464,0,0,0,0,0,0.19924798825107,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0.628303510868405,0.217294743844016,3.82801391678303,0.0915975934018623,4.79731298416771,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0.138674673013139,0.347119476670262,0,0,0.17472666824203,0.859930162358083,0.580537987734511,0.219267951258557,0.246346371159628,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0.864221491201268,1.30634944043764,0,0,1.87426823963964,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,1.66441758450784,0,0.50313580350515,0,0.457680136793847,0.302461847526478,0,0.147855149989634,0,0,0,0.414706207840855,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,2.40016658797892,1.03018711554838,0.336749488765919,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523813388962845,0,0,0,0,0,0,0,0.548257766857182,1.48863353516788,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.559277158988962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,6.69591032700152,2.77305377178851,12.5461703015899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12729431655633,0,0,0.342233301085281,0,0,0.665320713092027,0,0,0,0,0,0,0.813792356631477,0,0,0 | |phase1_expression=3.08853244759946,6.63711624062048,2.53717927372748,6.00439790118782,7.15137751083661,10.4680622892044,0,0.631719873426831,0.261185628199839,0,0,0,0.791300934685361,0,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,2.27934920996244,0.794455084879313,2.58152958673932,0.354668382198357,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,1.79389635688862,1.92201649936711,0.423863802319124,0.600182192168805,0,0.772921620136887,1.11670113798954,1.0126579934476,0.292311015483596,0.504867548488229,0.184099797284599,0,1.77504796258307,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0.354920400119532,0.337169380156203,0,0.330881918197182,0,0,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49959486773086,0,0,0,0,0,0,0.579125226670317,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,1.5156378572313,1.66435439510497,0.604780586659361,2.97729369382532,4.45039722535381,4.77122160536225,3.58789617915963,2.04682899626681,6.27330292460069,5.93672265779964,0.308419387605311,1.06537035187876,0.0821271560138091,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.193341436584244,0,0,0,0,0,0.0852266274161009,0.445160178233687,0,0,0,0,0,1.25924938732256,0.6970372701606,0,0,1.73986598415015,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0.78494864019923,0,0,0,0,0,0,0,0.974853958525138,0,0,0,1.13008116620243,0,0.66343897524122,0.876901770507525,0,0,0,0,0.281695602532241,0,0,0,0,6.12212142363226,6.25660296623814,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,1.78178808499583,0.614321404198464,0,0,0,0,0,0.19924798825107,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0.628303510868405,0.217294743844016,3.82801391678303,0.0915975934018623,4.79731298416771,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0.138674673013139,0.347119476670262,0,0,0.17472666824203,0.859930162358083,0.580537987734511,0.219267951258557,0.246346371159628,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0.864221491201268,1.30634944043764,0,0,1.87426823963964,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,1.66441758450784,0,0.50313580350515,0,0.457680136793847,0.302461847526478,0,0.147855149989634,0,0,0,0.414706207840855,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,2.40016658797892,1.03018711554838,0.336749488765919,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523813388962845,0,0,0,0,0,0,0,0.548257766857182,1.48863353516788,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.559277158988962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,6.69591032700152,2.77305377178851,12.5461703015899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12729431655633,0,0,0.342233301085281,0,0,0.665320713092027,0,0,0,0,0,0,0.813792356631477,0,0,0 | ||
|short_description=p9@MFAP5 | |short_description=p9@MFAP5 | ||
}} | }} |
Latest revision as of 05:09, 25 September 2015
Short description: | p9@MFAP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_MFAP5_5end |
Coexpression cluster: | C628_Adipocyte_Preadipocyte_Fibroblast_tenocyte_Smooth_Placental_chorionic |
Association with transcript: | 367bp_to_AL833019_5end |
EntrezGene: | MFAP5 |
HGNC: | 29673 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 5.14e-23 | 12 |
fibroblast | 1.36e-16 | 76 |
fibrocyte | 7.38e-15 | 3 |
tendon cell | 7.38e-15 | 3 |
adipocyte of omentum tissue | 1.11e-14 | 3 |
preadipocyte of the breast | 1.75e-14 | 3 |
omentum preadipocyte | 1.92e-14 | 3 |
fat cell | 3.92e-14 | 15 |
adipocyte of breast | 2.32e-10 | 2 |
synovial cell | 2.92e-07 | 3 |
chorionic membrane mesenchymal stem cell | 3.95e-07 | 3 |
mesenchymal cell | 4.53e-07 | 354 |
connective tissue cell | 8.59e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.37e-27 | 6 |
peritoneum | 2.37e-27 | 6 |
abdominal cavity | 2.37e-27 | 6 |
visceral peritoneum | 2.37e-27 | 6 |
cavity lining | 1.25e-23 | 12 |
serous membrane | 1.25e-23 | 12 |
dense regular connective tissue | 7.38e-15 | 3 |
tendon | 7.38e-15 | 3 |
regular connective tissue | 7.38e-15 | 3 |
organ component layer | 8.58e-14 | 66 |
breast | 2.10e-11 | 10 |
perirenal fat | 1.46e-10 | 2 |
chorion | 2.26e-10 | 7 |
chest | 2.45e-10 | 11 |
connective tissue | 8.81e-08 | 371 |
extraembryonic membrane | 1.06e-07 | 14 |
membranous layer | 1.06e-07 | 14 |
stratified squamous epithelium | 2.92e-07 | 3 |
layer of synovial tissue | 2.92e-07 | 3 |
synovial joint | 2.92e-07 | 3 |
synovial membrane of synovial joint | 2.92e-07 | 3 |
egg chorion | 3.95e-07 | 3 |