FFCP PHASE1:Hg19::chr5:158526693..158526706,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1879 | |EntrezGene=1879 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3126 | |HGNC=3126 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000380654_5end | |association_with_transcript=0bp_to_ENST00000380654_5end | ||
|cluster_id=chr5:158526693..158526706,- | |||
|coexpression_cluster_id=C179 | |coexpression_cluster_id=C179 | ||
|description=CAGE_peak_8_at_EBF1_5end | |description=CAGE_peak_8_at_EBF1_5end | ||
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|ontology_enrichment_celltype=CL:0000945!7.44e-34!24;CL:0000826!7.44e-34!24;CL:0000236!6.56e-21!14;CL:0000542!1.01e-12!53;CL:0000051!1.01e-12!53;CL:0000838!7.25e-12!52;CL:0000080!7.57e-08!6 | |ontology_enrichment_celltype=CL:0000945!7.44e-34!24;CL:0000826!7.44e-34!24;CL:0000236!6.56e-21!14;CL:0000542!1.01e-12!53;CL:0000051!1.01e-12!53;CL:0000838!7.25e-12!52;CL:0000080!7.57e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000945;9.39e-85;24!CL:0000236;3.97e-71;13!CL:0000542;6.28e-31;53!CL:0000785;4.07e-08;1!CL:0000819;4.07e-08;1!CL:0000817;6.52e-08;1!CL:0002087;6.64e-07;104 | |ontology_enrichment_celltype_v019=CL:0000945;9.39e-85;24!CL:0000236;3.97e-71;13!CL:0000542;6.28e-31;53!CL:0000785;4.07e-08;1!CL:0000819;4.07e-08;1!CL:0000817;6.52e-08;1!CL:0002087;6.64e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.26e-85,24;CL:0000826,3.26e-85,24;CL:0000236,2.62e-66,14;CL:0000542,6.78e-41,53;CL:0000051,6.78e-41,53;CL:0000838,2.13e-37,52;CL:0002087,1.35e-16,115;CL:0002031,5.54e-14,120;CL:0000738,1.85e-13,136;CL:0002032,8.66e-11,161;CL:0000837,8.66e-11,161;CL:0000988,1.01e-10,177;CL:0000037,3.49e-10,168;CL:0000817,7.15e-10,3;CL:0000819,3.80e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000051;6.28e-31;53!UBERON:0001045;4.98e-08;1!UBERON:0000358;6.52e-08;1!UBERON:0004874;1.26e-07;1 | |ontology_enrichment_development_v019=CL:0000051;6.28e-31;53!UBERON:0001045;4.98e-08;1!UBERON:0000358;6.52e-08;1!UBERON:0004874;1.26e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060058;2.84e-16;10!DOID:0060073;4.07e-08;1!DOID:8675;4.07e-08;1!DOID:12603;1.26e-07;1 | |ontology_enrichment_disease_v019=DOID:0060058;2.84e-16;10!DOID:0060073;4.07e-08;1!DOID:8675;4.07e-08;1!DOID:12603;1.26e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.62e-16,10;DOID:0060073,3.80e-08,1;DOID:8675,3.80e-08,1;DOID:12603,1.44e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.78e-09!15;UBERON:0000179!2.78e-09!15;UBERON:0000463!2.78e-09!15 | |ontology_enrichment_uberon=UBERON:0000178!2.78e-09!15;UBERON:0000179!2.78e-09!15;UBERON:0000463!2.78e-09!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;4.98e-08;1!UBERON:0001153;4.98e-08;1!UBERON:0009854;4.98e-08;1!UBERON:0002372;1.26e-07;1!UBERON:0000989;1.26e-07;1!UBERON:0007195;1.26e-07;1!UBERON:0008811;1.26e-07;1!UBERON:0001961;1.26e-07;1!UBERON:0001744;1.26e-07;1!UBERON:0001042;1.26e-07;1!UBERON:0001735;1.26e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0001154;4.98e-08;1!UBERON:0001153;4.98e-08;1!UBERON:0009854;4.98e-08;1!UBERON:0002372;1.26e-07;1!UBERON:0000989;1.26e-07;1!UBERON:0007195;1.26e-07;1!UBERON:0008811;1.26e-07;1!UBERON:0001961;1.26e-07;1!UBERON:0001744;1.26e-07;1!UBERON:0001042;1.26e-07;1!UBERON:0001735;1.26e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,5.33e-08,1;UBERON:0001153,5.33e-08,1;UBERON:0001045,5.33e-08,1;UBERON:0000989,1.04e-07,1;UBERON:0008811,1.04e-07,1;UBERON:0006258,1.04e-07,1;UBERON:0005876,1.04e-07,1;UBERON:0004874,1.04e-07,1;UBERON:0007195,1.54e-07,1;UBERON:0002372,1.99e-07,1;UBERON:0001961,1.99e-07,1;UBERON:0001744,1.99e-07,1;UBERON:0001735,1.99e-07,1 | |||
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|short_description=p8@EBF1 | |short_description=p8@EBF1 | ||
}} | }} |
Latest revision as of 15:08, 16 September 2015
Short description: | p8@EBF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_EBF1_5end |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | 0bp_to_ENST00000380654_5end |
EntrezGene: | EBF1 |
HGNC: | 3126 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.26e-85 | 24 |
pro-B cell | 3.26e-85 | 24 |
B cell | 2.62e-66 | 14 |
lymphocyte | 6.78e-41 | 53 |
common lymphoid progenitor | 6.78e-41 | 53 |
lymphoid lineage restricted progenitor cell | 2.13e-37 | 52 |
nongranular leukocyte | 1.35e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 5.54e-14 | 120 |
leukocyte | 1.85e-13 | 136 |
hematopoietic oligopotent progenitor cell | 8.66e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.66e-11 | 161 |
hematopoietic cell | 1.01e-10 | 177 |
hematopoietic stem cell | 3.49e-10 | 168 |
precursor B cell | 7.15e-10 | 3 |
B-1 B cell | 3.80e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 5.33e-08 | 1 |
caecum | 5.33e-08 | 1 |
midgut | 5.33e-08 | 1 |
penis | 1.04e-07 | 1 |
intromittent organ | 1.04e-07 | 1 |
lateral plate mesenchyme | 1.04e-07 | 1 |
undifferentiated genital tubercle | 1.04e-07 | 1 |
somatopleure | 1.04e-07 | 1 |
stroma of bone marrow | 1.54e-07 | 1 |
tonsil | 1.99e-07 | 1 |
mucosa-associated lymphoid tissue | 1.99e-07 | 1 |
lymphoid tissue | 1.99e-07 | 1 |
tonsillar ring | 1.99e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.62e-16 | 10 |
lymphatic system cancer | 3.80e-08 | 1 |
lymphosarcoma | 3.80e-08 | 1 |
acute leukemia | 1.44e-07 | 1 |