FFCP PHASE1:Hg19::chr10:135140510..135140524,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:135140510..135140524,- | |||
|coexpression_cluster_id=C321 | |coexpression_cluster_id=C321 | ||
|description=CAGE_peak_at_chr10:135140510..135140524,- | |description=CAGE_peak_at_chr10:135140510..135140524,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002601!9.44e-08!1 | |ontology_enrichment_celltype=CL:0002601!9.44e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000214;5.04e-34;3!CL:0000153;2.31e-12;9!CL:0000447;2.31e-12;9!CL:0000327;5.74e-08;15 | |ontology_enrichment_celltype_v019=CL:0000214;5.04e-34;3!CL:0000153;2.31e-12;9!CL:0000447;2.31e-12;9!CL:0000327;5.74e-08;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000214,4.27e-34,3;CL:0000153,2.19e-12,9;CL:0000447,2.19e-12,9;CL:0000327,5.55e-08,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:178!8.84e-08!1;DOID:326!8.84e-08!1;DOID:3978!8.84e-08!1;DOID:3394!8.84e-08!1;DOID:5844!8.84e-08!1;DOID:3095!8.03e-07!22;DOID:2994!8.03e-07!22 | |ontology_enrichment_disease=DOID:178!8.84e-08!1;DOID:326!8.84e-08!1;DOID:3978!8.84e-08!1;DOID:3394!8.84e-08!1;DOID:5844!8.84e-08!1;DOID:3095!8.03e-07!22;DOID:2994!8.03e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:1115;5.71e-21;20 | |ontology_enrichment_disease_v019=DOID:1115;5.71e-21;20 | ||
|ontology_enrichment_disease_v019_2=DOID:1115,5.71e-21,20 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0006915;5.04e-34;3!UBERON:0007616;5.04e-34;3!UBERON:0002217;5.04e-34;3!UBERON:0002018;5.04e-34;3!UBERON:0004905;1.00e-13;8!UBERON:0000982;1.00e-13;8!UBERON:0004770;1.00e-13;8!UBERON:0004457;2.31e-12;9!UBERON:0000042;2.31e-12;9!UBERON:0000486;1.27e-09;12 | |ontology_enrichment_uberon_v019=UBERON:0006915;5.04e-34;3!UBERON:0007616;5.04e-34;3!UBERON:0002217;5.04e-34;3!UBERON:0002018;5.04e-34;3!UBERON:0004905;1.00e-13;8!UBERON:0000982;1.00e-13;8!UBERON:0004770;1.00e-13;8!UBERON:0004457;2.31e-12;9!UBERON:0000042;2.31e-12;9!UBERON:0000486;1.27e-09;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,4.27e-34,3;UBERON:0007616,4.27e-34,3;UBERON:0002217,4.27e-34,3;UBERON:0002018,4.27e-34,3;UBERON:0004905,9.39e-14,8;UBERON:0000982,9.39e-14,8;UBERON:0004770,9.39e-14,8;UBERON:0004457,1.22e-09,12;UBERON:0000042,1.22e-09,12 | |||
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|short_description=p@chr10:135140510..135140524,- | |short_description=p@chr10:135140510..135140524,- | ||
}} | }} |
Latest revision as of 11:52, 23 July 2015
Short description: | p@chr10:135140510..135140524, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:135140510..135140524, - |
Coexpression cluster: | C321_synovial_anaplastic_maxillary_glassy_keratoacanthoma_rhabdomyosarcoma_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 4.27e-34 | 3 |
GAG secreting cell | 2.19e-12 | 9 |
carbohydrate secreting cell | 2.19e-12 | 9 |
extracellular matrix secreting cell | 5.55e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 4.27e-34 | 3 |
layer of synovial tissue | 4.27e-34 | 3 |
synovial joint | 4.27e-34 | 3 |
synovial membrane of synovial joint | 4.27e-34 | 3 |
articulation | 9.39e-14 | 8 |
skeletal joint | 9.39e-14 | 8 |
articular system | 9.39e-14 | 8 |
cavity lining | 1.22e-09 | 12 |
serous membrane | 1.22e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
sarcoma | 5.71e-21 | 20 |