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MacroAPE 1083:CNhs12920 bl f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;33.636659087969235;73.60253464324079;42.8864882220912;99.27606364694692!2;13.218978470739502;98.65223783812166;79.42405152560265;58.10647776...")
 
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I7;0.188915!12177-128I8;0.0521658!12182-129A4;0.0723344!12183-129A5;0.116429!12184-129A6;0.132394!10809-111A8;0.147337!10597-108E3;0.0218676!10717-109I6;0.515256!10455-106G5;0.16912!10534-107G3;0.000218046!10429-106D6;0.00123704!10464-106H5;0.000246207!10827-111C8;0.000179608!10789-110H6;1.73587e-06!10828-111C9;0.00325894!10788-110H5;0.0046312!10792-110H9;1.00443e-07!10765-110E9;0.000423975!10829-111D1;0.000414345!10830-111D2;0.000102437!10831-111D3;0.00353358!10832-111D4;0.000592541!10833-111D5;0.000478026!10764-110E8;4.19424e-05!10770-110F5;4.51536e-05!10399-106A3;2.82515e-05!10400-106A4;0.000220443!10405-106A9;8.20001e-05!10834-111D6;0.000179349!10835-111D7;0.000103771!10836-111D8;0.00320934!10837-111D9;0.000340544!10699-109G6;0.0016491!10802-111A1;0.0110362!10796-110I4;0.00102969!10010-101C1;0.349863!10810-111A9;0.00242172!10421-106C7;0.0240565!10708-109H6;0.00013559!12235-129G3;0.197451!12236-129G4;0.685557!12237-129G5;0.568373!10167-103B5;0.92712!10151-102I7;0.0071431!10428-106D5;0.0023903!10795-110I3;0.963528!10805-111A4;5.81733e-05!10052-101G7;0.0878842!10189-103D9;7.99567e-06!10589-108D4;1.30699e-06!10425-106D2;0.147598!10427-106D4;0.743884!10702-109G9;0.00268141!10432-106D9;0.0613131!10496-107C1;0.0804217!10718-109I7;0.704779!10011-101C2;0.000582572!10053-101G8;6.09615e-06!10686-109F2;0.178339!10084-102B3;0.99054!10012-101C3;0.00225133!10085-102B4;0.00110371!10482-107A5;0.0135691!10419-106C5;0.114726!10080-102A8;0.0899656!10760-110E4;0.000347997!10709-109H7;0.0390857!10710-109H8;0.265073!10703-109H1;0.063966!10719-109I8;0.444808!10642-109A3;0.293725!10177-103C6;0.686969!10164-103B2;0.00141375!10173-103C2;0.00352766!10166-103B4;0.0222645!10083-102B2;0.0116834!10188-103D8;0.0137233!10552-107I3;0.000545141!10553-107I4;0.00967511!10013-101C4;0.800344!10536-107G5;1.31255e-05!10618-108G6;0.677072!10423-106C9;0.0373052!10785-110H2;0.0155995!12238-129G6;0.0359514!12239-129G7;0.381702!12240-129G8;0.190134!10416-106C2;0.676581!10801-110I9;6.45749e-06!10766-110F1;0.000477746!10824-111C5;0.000509451!10825-111C6;0.0023531!10826-111C7;0.00312298!10454-106G4;0.00161089!10409-106B4;0.00230571!10638-108I8;0.000919625!10636-108I6;0.00115006!10513-107D9;0.00418252!10420-106C6;0.252043!10082-102B1;0.0672301!10014-101C5;0.00200938!10070-101I7;0.000432533!10452-106G2;0.000459268!10453-106G3;0.0281803!10449-106F8;0.00660358!10042-101F6;0.00492495!10069-101I6;0.000494762!10193-103E4;0.000819594!10631-108I1;0.0021444!10438-106E6;0.00197869!10488-107B2;0.637772!10196-103E7;0.00623567!10071-101I8;5.30405e-05!10071-101I8;0.000428521!10041-101F5;0.0450285!10451-106G1;0.000300073!10450-106F9;0.0216582!10604-108F1;0.0664975!10605-108F2;0.337414!10606-108F3;0.0490991!10603-108E9;0.274024!10497-107C2;0.201688!10448-106F7;0.00346445!10643-109A4;0.0247375!10426-106D3;0.0446655!10431-106D8;0.340843!10197-103E8;0.0566282!10443-106F2;0.000994896!10815-111B5;0.270014!10816-111B6;0.0313298!10817-111B7;0.0908926!10015-101C6;0.0412288!10410-106B5;0.000142987!10054-101G9;0.133324!10758-110E2;9.48539e-06!10711-109H9;0.132258!10040-101F4;0.00162088!10470-106I2;0.00430137!10415-106C1;0.0800262!10198-103E9;0.692233!10614-108G2;1.77519e-05!10612-108F9;0.264666!10549-107H9;0.0165542!10615-108G3;0.0520165!10487-107B1;0.654654!10433-106E1;0.0231771!10688-109F4;0.400657!10444-106F3;0.839945!10444-106F3;0.146618!10485-107A8;0.183099!10413-106B8;0.147796!10175-103C4;0.0806547!10161-103A8;0.000996033!12131-128D7;0.00107575!10624-108H3;0.0255195!10712-109I1;0.868469!10205-103F7;6.82478e-05!10206-103F8;5.15471e-06!10207-103F9;4.40519e-05!10050-101G5;0.000111452!10051-101G6;0.00366118!10016-101C7;0.000881792!10046-101G1;0.00067061!10778-110G4;2.83122e-05!10633-108I3;0.106794!10818-111B8;0.235488!10819-111B9;0.0128835!10820-111C1;0.0114065!10484-107A7;0.0156!10808-111A7;0.206146!10169-103B7;0.00134767!10153-102I9;0.0110856!13425-144D5;0.00137047!13433-144E4;0.177063!13437-144E8;0.147347!11904-125F5;0.0381583!11905-125F6;0.165526!10039-101F3;0.432572!10791-110H8;0.00405626!10017-101C8;0.292138!10045-101F9;0.0345004!10509-107D5;0.000396917!10839-111E2;0.403246!10692-109F8;0.639659!10079-102A7;0.73767!10078-102A6;0.000646409!10721-110A1;0.00397267!10569-108B2;0.0219329!10570-108B3;0.396374!10571-108B4;0.567207!10647-109A8;0.440008!10752-110D5;0.39585!10782-110G8;0.0220941!10726-110A6;0.871478!10018-101C9;0.790626!10086-102B5;0.280682!10182-103D2;0.233034!10165-103B3;0.000838347!10499-107C4;0.00182073!10408-106B3;0.633888!10019-101D1;0.283478!10068-101I5;0.00020192!10075-102A3;6.89261e-06!10077-102A5;0.000400835!10727-110A7;0.343746!10775-110G1;0.00231129!10412-106B7;0.000460516!12231-129F8;0.561283!12232-129F9;0.0272025!12233-129G1;0.00779909!12234-129G2;0.0243539!10414-106B9;0.0729212!10170-103B8;0.659938!10183-103D3;0.0147327!10150-102I6;0.00613251!10174-103C3;0.00194825!10155-103A2;0.000205978!10038-101F2;0.000132058!10838-111E1;8.88459e-05!10759-110E3;0.790904!10514-107E1;0.168642!10465-106H6;0.000426421!10691-109F7;0.169181!10843-111E6;0.694728!10844-111E7;0.183115!11747-123G1;0.673577!11748-123G2;0.558532!11749-123G3;0.236228!11750-123G4;0.893029!11751-123G5;0.0550429!11840-124H4;0.0438402!11752-123G6;0.15677!11753-123G7;0.610856!11754-123G8;0.098608!11755-123G9;0.143167!11756-123H1;0.710679!11833-124G6;0.376172!11760-123H5;0.389988!11836-124G9;0.229605!11758-123H3;0.486875!11835-124G8;0.46881!11762-123H7;0.124512!11838-124H2;0.0751818!11757-123H2;0.214289!11759-123H4;0.975921!11761-123H6;0.32524!11842-124H6;0.0851455!11837-124H1;0.199827!10568-108B1;0.159821!13230-141I8;0.178614!13231-141I9;0.634575!10696-109G3;0.369177!10493-107B7;0.0108098!10494-107B8;0.0473303!10850-111F4;0.578079!10851-111F5;0.175426!10852-111F6;0.137514!10853-111F7;0.169814!10854-111F8;0.0451298!10855-111F9;0.00752714!10856-111G1;0.256891!10847-111F1;0.564871!10846-111E9;0.5659!10848-111F2;0.395551!10845-111E8;0.262127!10857-111G2;0.014319!10858-111G3;0.130674!10156-103A3;0.0220836!11901-125F2;0.00233066!11902-125F3;0.230823!11903-125F4;0.225923!10689-109F5;0.18823!10648-109A9;0.15598!10784-110H1;0.0910594!10744-110C6;0.303054!10772-110F7;0.00195377!10474-106I6;1.73551e-05!10600-108E6;0.00809085!10684-109E9;0.159994!12226-129F3;0.0594033!12227-129F4;0.385692!10508-107D4;0.00113896!10539-107G8;0.745386!10607-108F4;0.605575!10555-107I6;0.175248!10774-110F9;0.813251!10637-108I7;0.00436584!10663-109C6;0.641138!10728-110A8;0.544657!10729-110A9;0.286521!10430-106D7;0.0383897!10730-110B1;0.00287599!10813-111B3;0.767484!10812-111B2;0.000702525!10037-101F1;0.127614!10172-103C1;0.00279646!10163-103B1;0.0195852!10076-102A4;0.0017801!10073-102A1;0.00385076!10036-101E9;0.0882464!10195-103E6;0.0017694!10277-104E7;0.00294879!10434-106E2;0.0092933!10550-107I1;0.241206!10545-107H5;0.106281!10544-107H4;0.524829!10704-109H2;0.645711!10510-107D6;0.528571!10558-107I9;0.589155!10020-101D2;0.740474!10732-110B3;1.78084e-05!10049-101G4;0.119459!10698-109G5;0.0296021!10437-106E5;0.0254695!10417-106C3;0.194591!10035-101E8;0.562269!10171-103B9;0.00359833!10157-103A4;0.011014!10034-101E7;0.00260731!10072-101I9;0.00294414!10199-103F1;0.079318!10200-103F2;0.00874441!10697-109G4;0.000689465!10723-110A3;0.396094!10179-103C8;0.940871!10160-103A7;0.00437102!10180-103C9;0.0193212!10162-103A9;0.00362545!10021-101D3;0.00335744!10840-111E3;0.0107535!10706-109H4;9.59531e-05!10033-101E6;0.748183!10032-101E5;0.00119591!10490-107B4;0.00259124!10439-106E7;0.219794!10022-101D4;0.23267!10176-103C5;1.68788e-05!10469-106I1;0.0086915!10067-101I4;0.455048!10411-106B6;0.00103563!10471-106I3;0.571442!10030-101E3;0.0361207!10475-106I7;3.87833e-06!10787-110H4;0.231888!10477-106I9;0.102088!10695-109G2;0.460416!11771-123I7;0.00124425!11772-123I8;0.406418!11773-123I9;0.0633764!10093-102C3;0.00794119!10442-106F1;0.00152922!10442-106F1;0.00113061!10201-103F3;0.00222384!10639-108I9;3.03861e-06!11843-124H7;0.878929!11841-124H5;0.318841!10693-109F9;0.0165969!10436-106E4;0.610465!10483-107A6;0.174063!10282-104F3;0.281906!10023-101D5;0.0377633!10066-101I3;0.00296658!10065-101I2;0.0154287!10800-110I8;0.000825021!10610-108F7;0.618943!10841-111E4;0.82537!10541-107H1;0.146988!10842-111E5;0.330018!10562-108A4;0.575601!10024-101D6;0.685039!10064-101I1;0.00123697!10609-108F6;0.0149887!10048-101G3;0.118367!10781-110G7;0.000195252!10181-103D1;0.720297!10159-103A6;0.000157288!10056-101H2;0.00054446!10737-110B8;0.000734399!10025-101D7;0.188083!10044-101F8;0.23118!10424-106D1;0.0108285!10463-106H4;0.00181762!10616-108G4;0.592578!10486-107A9;0.101491!10062-101H8;0.016952!10202-103F4;0.000746723!10158-103A5;0.003604!10441-106E9;0.00131608!10031-101E4;0.654591!10063-101H9;0.00225564!10063-101H9;0.0558944!11763-123H8;0.000364398!11765-123I1;0.109055!11768-123I4;0.0803992!10807-111A6;0.45237!10790-110H7;0.0311198!10798-110I6;0.0548956!10786-110H3;0.871302!10591-108D6;0.328083!10593-108D8;0.511294!10590-108D5;0.983577!10026-101D8;0.0785234!10096-102C6;0.0166301!10168-103B6;0.89061!10154-103A1;0.00451899!10209-103G2;0.000913757!10061-101H7;0.00281961!10027-101D9;0.0014661!10043-101F7;0.0452807!10783-110G9;0.509043!10028-101E1;0.6951!10060-101H6;0.000664636!10203-103F5;0.000386131!10059-101H5;0.00539319!10047-101G2;0.00209639!10029-101E2;0.00584291!10058-101H4;0.00118117!10418-106C4;0.00027836!10492-107B6;0.368486!10694-109G1;0.000742496!10797-110I5;0.0184966!10057-101H3;0.435975!10100-102D1;0.000896399!10055-101H1;1.1048e-05!10204-103F6;0.000118976!10191-103E2;0.000111732!10563-108A5;0.00278667
|name=CNhs12920_bl_f2
|name=CNhs12920_bl_f2
|tomtom_result=SP1#MA0079.2;-1;9.52054e-05;0.0453178;0.0905169;10;TCCCCTCCCTGC;CCCCGCCCCC;+!YGR067C#MA0425.1;0;0.00040282;0.191742;0.191491;12;TCCCCTCCCTGC;ACCCCACTTTTTTG;+!Trl#MA0205.1;1;0.00158806;0.755919;0.390529;9;TCCCCTCCCTGC;TTGCTCTCTC;+!Pax4#MA0068.1;16;0.00195562;0.930875;0.390529;12;TCCCCTCCCTGC;GAAAAATTTCCCATACTCCACTCCCCCCCC;+!YML081W#MA0431.1;0;0.00205379;0.977603;0.390529;9;TCCCCTCCCTGC;ACCCCGCAC;+!RXR::RAR_DR5#MA0159.1;0;0.00276723;1.3172;0.438493;12;TCCCCTCCCTGC;TGACCTCTCCGTGACCT;-!btd#MA0443.1;-2;0.00529478;2.52032;0.65776;10;TCCCCTCCCTGC;TCCGCCCCCT;-!Klf4#MA0039.2;-2;0.00589751;2.80721;0.65776;10;TCCCCTCCCTGC;CCTTCCTTTA;-!Klf4#MA0039.2;0;0.0069183;3.29311;0.65776;10;TCCCCTCCCTGC;GCCCCACCCA;-!MZF1_5-13#MA0057.1;2;0.0069183;3.29311;0.65776;8;TCCCCTCCCTGC;TTCCCCCTAC;-!opa#MA0456.1;-2;0.00988634;4.7059;0.663301;10;TCCCCTCCCTGC;GACCCCCCGCTG;+!SP1#MA0079.2;0;0.00994628;4.73443;0.663301;10;TCCCCTCCCTGC;ACCCCGCCCC;-!GABPA#MA0062.2;0;0.0100117;4.76556;0.663301;11;TCCCCTCCCTGC;GCCACTTCCGG;-!RGM1#MA0366.1;-1;0.0103393;4.92151;0.663301;5;TCCCCTCCCTGC;CCCCT;-!GABPA#MA0062.2;-2;0.0104649;4.98128;0.663301;10;TCCCCTCCCTGC;CTCTTCCGGT;-!IXR1#MA0323.1;1;0.0121009;5.76001;0.719059;12;TCCCCTCCCTGC;CCCCGCTTCCGGCTT;-!Ar#MA0007.1;9;0.0149144;7.09924;0.834112;12;TCCCCTCCCTGC;ATAAGAACACCCTGTACCCGCC;+!MZF1_1-4#MA0056.1;-5;0.0163891;7.80121;0.865667;6;TCCCCTCCCTGC;TCCCCA;-!MSN4#MA0342.1;-1;0.0192318;9.15434;0.948788;5;TCCCCTCCCTGC;CCCCT;-!UGA3#MA0410.1;-1;0.0199587;9.50032;0.948788;8;TCCCCTCCCTGC;TCCCGCCG;-
}}
}}

Latest revision as of 14:55, 7 September 2012

Full Name: CNhs12920_bl_f2

Motif matrix
POACGT
133.63665908796923573.6025346432407942.886488222091299.27606364694692
213.21897847073950298.6522378381216679.4240515256026558.10647776578429
38.019734140961116171.0150741411052649.82047624071030620.54646107747148
414.995966708738454180.047939716109822.341277868395936852.01656130700398
50.0249.401745600248150.00.0
60.00.00.0249.40174560024815
70.0249.401745600248150.00.0
80.0185.81672821986890.063.58501738037924
93.7286091457816735214.2642070091533215.31017446940994916.098754975903248
108.170682939139637101.3176294383576433.943323060323756105.97011016242709
1135.8199378092441466.93009880422774125.4374491077005221.214259879075765
1213.924351743502115111.1127095498612250.492861216876773.8718230900081

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SP1#MA0079.2-19.52054e-050.04531780.090516910TCCCCTCCCTGCCCCCGCCCCC+
YGR067C#MA0425.100.000402820.1917420.19149112TCCCCTCCCTGCACCCCACTTTTTTG+
Trl#MA0205.110.001588060.7559190.3905299TCCCCTCCCTGCTTGCTCTCTC+
Pax4#MA0068.1160.001955620.9308750.39052912TCCCCTCCCTGCGAAAAATTTCCCATACTCCACTCCCCCCCC+
YML081W#MA0431.100.002053790.9776030.3905299TCCCCTCCCTGCACCCCGCAC+
RXR::RAR_DR5#MA0159.100.002767231.31720.43849312TCCCCTCCCTGCTGACCTCTCCGTGACCT-
btd#MA0443.1-20.005294782.520320.6577610TCCCCTCCCTGCTCCGCCCCCT-
Klf4#MA0039.2-20.005897512.807210.6577610TCCCCTCCCTGCCCTTCCTTTA-
Klf4#MA0039.200.00691833.293110.6577610TCCCCTCCCTGCGCCCCACCCA-
MZF1_5-13#MA0057.120.00691833.293110.657768TCCCCTCCCTGCTTCCCCCTAC-
opa#MA0456.1-20.009886344.70590.66330110TCCCCTCCCTGCGACCCCCCGCTG+
SP1#MA0079.200.009946284.734430.66330110TCCCCTCCCTGCACCCCGCCCC-
GABPA#MA0062.200.01001174.765560.66330111TCCCCTCCCTGCGCCACTTCCGG-
RGM1#MA0366.1-10.01033934.921510.6633015TCCCCTCCCTGCCCCCT-
GABPA#MA0062.2-20.01046494.981280.66330110TCCCCTCCCTGCCTCTTCCGGT-
IXR1#MA0323.110.01210095.760010.71905912TCCCCTCCCTGCCCCCGCTTCCGGCTT-
Ar#MA0007.190.01491447.099240.83411212TCCCCTCCCTGCATAAGAACACCCTGTACCCGCC+
MZF1_1-4#MA0056.1-50.01638917.801210.8656676TCCCCTCCCTGCTCCCCA-
MSN4#MA0342.1-10.01923189.154340.9487885TCCCCTCCCTGCCCCCT-
UGA3#MA0410.1-10.01995879.500320.9487888TCCCCTCCCTGCTCCCGCCG-
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