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MCL coexpression mm9:48: Difference between revisions

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{{MCL_coexpression_mm9
{{MCL_coexpression_mm9|coexpression_dpi_cluster_scores_mean=0.00865420338552047,0.0124165658030766,0.00849136502196749,0.0211595659364401,0.0233327826719513,0.00593794515575195,0.012342197489287,0.075167132162032,0.0664982597503946,0.0710620193374125,0.0244357032889812,0.0177564212934378,0.0376522530207948,0.0292251175213948,0.111154577418516,0.169367291117402,0.0683545278819373,0.518217798286066,0.497991308608176,0.490643638275482,0.0175261275563701,0.034213440532407,0.0379737687414238,0.0798124315292987,0.0859944468854741,0.0148632297055147,0.0157106557945837,0.0151911699672548,0.0387974830961054,0.0215304976005736,0.01433016773927,0.00435958180613992,0.00280815026640532,0.00560102774280789,0.0279973617605546,0.025611479477189,0.0271511027298351,0.0230502715008489,0.021919908897796,0.0162604621154575,0.0750634587353859,0.0351287685344608,0.0315921484024654,0.000643372269968451,4.74189712092988e-05,-0.000442774285826458,0.00341293697259101,7.95660413275439e-05,0.00133270011173004,-0.000372678472103089,-0.00216727130796364,-0.00381839417268546,0.987356612847982,0.0781111818755539,0.0823715410707997,-0.000256428918375343,0.00362568829319873,0.00173776220560616,0.00228786018363854,0.00400096360704135,0.0027439565883177,-0.00338289537804063,-2.04597624010792e-05,0.026021461576863,0.0312738641516393,0.0241236416058864,0.00948389813483719,0.00566230647191505,0.00016927846419132,0.00059354998975509,0.000370349863435453,0.00761744169213187,0.00618820390353467,0.000744482528298493,0.00171742618137328,0.00129545621100771,0.00467042595068711,0.00438165374324538,0.00346107271586265,0.00264128179282555,0.00255370726849425,-0.000451784326472949,0.00474182472137225,0.00385021021959244,0.00364578709921651,0.0042769731779856,0.00398090057404579,0.00383275253008904,0.00465815290730975,0.00199210239805564,0.034855300250246,0.0220775281162235,0.00472153721157211,0.00029909646544074,0.00244418806496573,0.000617790384104578,0.0272910192187429,0.00210660080572533,0.0014219305166165,0.00242844653318239,0.00657963207480452,0.00111021443878461,-3.83940022523311e-05,-0.000694488424890259,0.00585197727063241,0.00290757185214402,0.00409714714271495,0.0317310045324914,0.180200937415847,0.0267597697558511,0.00149602508394272,0.00313864515535117,0.00188006601795862,0.00416778465418853,0.00498551549202135,0.00463286450273685,0.00453462269758355,0.0247640646674798,0.0447994329577715,0.00604355509902378,0.0477381923147033,0.0486887767693813,0.0102952195806901,0.00280850870441837,0.00200105396664443,0.0549600911435317,0.0669342453657713,0.0463904853298583,0.0493505843562406,0.00659518705431927,0.00398300057424221,0.00347396177062905,0.00216794688033646,0.00394772683967869,0.00458019243300884,0.00546682494576582,0.00516709071231321,0.046022715103729,0.00909469539636267,0.00868527494895655,0.00333079913316258,0.002309924559943,0.00240450188408225,0.00454715853925138,0.00623714397140035,0.00329252482857057,0.00328433078035817,0.00650921135436547,0.00283192308619983,0.00413563325887335,0.00347985952095661,0.000689174138258078,0.00454367282273073,0.0056390516939222,0.00244247145594455,0.00295729833243248,0.0260590278852154,0.0267491264953138,0.026496066619318,0.00105247971822655,0.000280871858767628,0.00121533400861321,-0.00074693293777629,0.00143606527085753,-0.000945213517085653,-0.000338623077175639,-0.000968111677581045,0.00388144998722795,0.00328805531149724,0.00562306758211481,0.00522717553878827,0.00685049201594489,0.0114028125399084,0.00878418021562836,0.00185529884309052,0.00128684726824833,0.0427617653085754,0.0092904236992502,0.000985988152994181,0.00168318739500279,0.0012683059422769,0.00166243910470617,0.00408040335709532,0.00669122550957104,0.0117908513502809,0.0056020830904627,0.00892689290285992,0.00827337207019438,0.00864185314253499,0.0153657315454356,0.0159263597512935,0.0161696511981109,0.00632611660342724,0.00401671095594716,0.00423724875213635,0.00425691738963234,0.00367343596043575,0.00534707571686359,0.00427158200071604,0.00424945361327244,0.00518422372037531,0.00733732874611642,0.0133156112332829,0.0016898832256483,0.000777455583277586,0.00295203840832166,0.00175191429362552,0.00764717424545873,0.00935861113299047,0.0130667654239602,0.0192533647832378,0.0130253057255422,0.0145957780243602,0.0182626668059199,0.0156369627173151,0.00674972719616754,0.00531791436935307,0.0132327861199994,0.0707274677988754,-0.000189986603876353,0.00176856512881855,0.00409074713377306,0.000397313692669029,0.0044553726292668,0.00603411683946148,0.0073718248969645,0.0146132744023049,0.0180515354328272,0.0220881080964403,0.0521459094176025,0.0539296388139832,0.0407816584817914,0.0566869146816161,0.0475919990722943,0.0245185925060151,0.0314291199008114,0.00663382752268597,0.00687550106527716,-0.00150983354043141,0.0105060132119578,0.00279374692319662,0.00358272840424547,0.00195536030712632,0.000913640011071762,0.00338073731672831,0.00217383309606011,0.00134149298886908,0.0023596820940314,0.00330662901495012,0.00266871238967406,0.0130812539550675,0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class II protein complex;1.55191553180717e-07;15000,14961,14960,15002!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;9.06295233755402e-07;15000,14961,14960,15002!GO:0042611;MHC protein complex;2.7204030597921e-06;15000,14961,14960,15002!GO:0019882;antigen processing and presentation;4.49653694636479e-05;15000,14961,14960,15002!GO:0019886;antigen processing and presentation of exogenous peptide antigen via MHC class II;4.58353864721288e-05;15000,14961,14960!GO:0002495;antigen processing and presentation of peptide antigen via MHC class II;4.58353864721288e-05;15000,14961,14960!GO:0002478;antigen processing and presentation of exogenous peptide antigen;4.58353864721288e-05;15000,14961,14960!GO:0005764;lysosome;4.58353864721288e-05;15442,15000,14960,15002,16792!GO:0000323;lytic vacuole;4.58353864721288e-05;15442,15000,14960,15002,16792!GO:0005773;vacuole;7.32728327283874e-05;15442,15000,14960,15002,16792!GO:0019884;antigen processing and presentation of exogenous antigen;8.05484079028954e-05;15000,14961,14960!GO:0048002;antigen processing and presentation of peptide antigen;0.000247572829146773;15000,14961,14960!GO:0009897;external side of plasma membrane;0.000451747479939822;14961,14960,16416,12478!GO:0043234;protein complex;0.000533363449890323;15000,14961,21815,15002,14960,12916,20963,16416,17896!GO:0005771;multivesicular body;0.00122866523670196;15000,14961!GO:0009986;cell surface;0.00122866523670196;14961,14960,16416,12478!GO:0042605;peptide antigen binding;0.00165446978722749;14961,14960!GO:0045582;positive regulation of T cell differentiation;0.00187383336418751;14960,20963!GO:0032991;macromolecular complex;0.00249064539573452;15000,14961,21815,15002,14960,12916,20963,16416,17896!GO:0045621;positive regulation of lymphocyte differentiation;0.00267770237827564;14960,20963!GO:0045580;regulation of T cell differentiation;0.00329876706340969;14960,20963!GO:0045619;regulation of lymphocyte differentiation;0.00583468301179603;14960,20963!GO:0005770;late endosome;0.0077224873319607;15000,14961!GO:0005886;plasma membrane;0.00988843316140974;15000,14961,15002,12522,14960,20963,12478,16416!GO:0044459;plasma membrane part;0.0114310786246954;15000,14961,14960,20963,15002,16416,12478!GO:0002376;immune system process;0.0149747073540423;15000,14961,14960,20963,15002!GO:0050870;positive regulation of T cell activation;0.0149747073540423;14960,20963!GO:0046645;positive regulation of gamma-delta T cell activation;0.0149747073540423;20963!GO:0045586;regulation of gamma-delta T cell differentiation;0.0149747073540423;20963!GO:0008418;protein N-terminal asparagine amidohydrolase activity;0.0149747073540423;18203!GO:0045588;positive regulation of gamma-delta T cell differentiation;0.0149747073540423;20963!GO:0046643;regulation of gamma-delta T cell activation;0.0149747073540423;20963!GO:0030305;heparanase activity;0.0149747073540423;15442!GO:0006955;immune response;0.0212197630768982;14961,14960,20963,15002!GO:0051251;positive regulation of lymphocyte activation;0.0240930797130199;14960,20963!GO:0030217;T cell differentiation;0.0240930797130199;14960,20963!GO:0050863;regulation of T cell activation;0.0240930797130199;14960,20963!GO:0043366;beta selection;0.0240930797130199;20963!GO:0046629;gamma-delta T cell activation;0.0240930797130199;20963!GO:0008432;JUN kinase binding;0.0240930797130199;21815!GO:0042492;gamma-delta T cell differentiation;0.0240930797130199;20963!GO:0043235;receptor complex;0.029038299686153;20963,16416!GO:0032632;interleukin-3 production;0.029038299686153;20963!GO:0045423;regulation of granulocyte macrophage colony-stimulating factor biosynthetic process;0.029038299686153;20963!GO:0042223;interleukin-3 biosynthetic process;0.029038299686153;20963!GO:0046638;positive regulation of alpha-beta T cell differentiation;0.029038299686153;20963!GO:0045399;regulation of interleukin-3 biosynthetic process;0.029038299686153;20963!GO:0032604;granulocyte macrophage colony-stimulating factor production;0.029038299686153;20963!GO:0045425;positive regulation of granulocyte macrophage colony-stimulating factor biosynthetic process;0.029038299686153;20963!GO:0045401;positive regulation of interleukin-3 biosynthetic process;0.029038299686153;20963!GO:0042253;granulocyte macrophage colony-stimulating factor biosynthetic process;0.029038299686153;20963!GO:0051249;regulation of lymphocyte activation;0.0319209438575822;14960,20963!GO:0050865;regulation of cell activation;0.0334504558785296;14960,20963!GO:0043306;positive regulation of mast cell degranulation;0.0334504558785296;20963!GO:0046637;regulation of alpha-beta T cell differentiation;0.0334504558785296;20963!GO:0043304;regulation of mast cell degranulation;0.0334504558785296;20963!GO:0001820;serotonin secretion;0.0334504558785296;20963!GO:0008534;oxidized purine base lesion DNA N-glycosylase activity;0.0334504558785296;72774!GO:0043302;positive regulation of leukocyte degranulation;0.0334504558785296;20963!GO:0030098;lymphocyte differentiation;0.0338301193238895;14960,20963!GO:0004716;receptor signaling protein tyrosine kinase activity;0.0362601119580879;20963!GO:0004067;asparaginase activity;0.0362601119580879;18203!GO:0044440;endosomal part;0.0362601119580879;15000!GO:0043300;regulation of leukocyte degranulation;0.0362601119580879;20963!GO:0000702;oxidized base lesion DNA N-glycosylase activity;0.0362601119580879;72774!GO:0045579;positive regulation of B cell differentiation;0.0362601119580879;20963!GO:0010008;endosome membrane;0.0362601119580879;15000!GO:0007044;cell-substrate junction assembly;0.0362601119580879;16416!GO:0016798;hydrolase activity, acting on glycosyl bonds;0.0401820961298792;15442,72774!GO:0045921;positive regulation of exocytosis;0.0413185711777597;20963!GO:0019815;B cell receptor complex;0.0413185711777597;20963!GO:0003823;antigen binding;0.0413185711777597;14961,14960!GO:0042110;T cell activation;0.0436502832841474;14960,20963!GO:0005765;lysosomal membrane;0.0436502832841474;15000!GO:0050853;B cell receptor signaling pathway;0.0436502832841474;20963!GO:0043303;mast cell degranulation;0.0436502832841474;20963!GO:0002448;mast cell mediated immunity;0.0436502832841474;20963!GO:0003906;DNA-(apurinic or apyrimidinic site) lyase activity;0.0436502832841474;72774!GO:0046641;positive regulation of alpha-beta T cell proliferation;0.0436502832841474;20963!GO:0002521;leukocyte differentiation;0.0473977546165589;14960,20963!GO:0001958;endochondral ossification;0.0477832998932027;17260!GO:0046635;positive regulation of alpha-beta T cell activation;0.0477832998932027;20963!GO:0042277;peptide 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|coexpression_dpi_cluster_scores_median=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147661033956106,0,0.461314354102506,0.444433243357485,0.430970888944806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896475887579005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100004302423367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0685090053637401,0,0,0,0.055643654597214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|gostat_on_MCL_coexpression=GO:0042613;MHC class II protein complex;1.55191553180717e-07;15000,14961,14960,15002!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;9.06295233755402e-07;15000,14961,14960,15002!GO:0042611;MHC protein complex;2.7204030597921e-06;15000,14961,14960,15002!GO:0019882;antigen processing and presentation;4.49653694636479e-05;15000,14961,14960,15002!GO:0019886;antigen processing and presentation of exogenous peptide antigen via MHC class II;4.58353864721288e-05;15000,14961,14960!GO:0002495;antigen processing and presentation of peptide antigen via MHC class II;4.58353864721288e-05;15000,14961,14960!GO:0002478;antigen processing and presentation of exogenous peptide antigen;4.58353864721288e-05;15000,14961,14960!GO:0005764;lysosome;4.58353864721288e-05;15442,15000,14960,15002,16792!GO:0000323;lytic vacuole;4.58353864721288e-05;15442,15000,14960,15002,16792!GO:0005773;vacuole;7.32728327283874e-05;15442,15000,14960,15002,16792!GO:0019884;antigen processing and presentation of exogenous antigen;8.05484079028954e-05;15000,14961,14960!GO:0048002;antigen processing and presentation of peptide antigen;0.000247572829146773;15000,14961,14960!GO:0009897;external side of plasma membrane;0.000451747479939822;14961,14960,16416,12478!GO:0043234;protein complex;0.000533363449890323;15000,14961,21815,15002,14960,12916,20963,16416,17896!GO:0005771;multivesicular body;0.00122866523670196;15000,14961!GO:0009986;cell surface;0.00122866523670196;14961,14960,16416,12478!GO:0042605;peptide antigen binding;0.00165446978722749;14961,14960!GO:0045582;positive regulation of T cell differentiation;0.00187383336418751;14960,20963!GO:0032991;macromolecular complex;0.00249064539573452;15000,14961,21815,15002,14960,12916,20963,16416,17896!GO:0045621;positive regulation of lymphocyte differentiation;0.00267770237827564;14960,20963!GO:0045580;regulation of T cell differentiation;0.00329876706340969;14960,20963!GO:0045619;regulation of lymphocyte differentiation;0.00583468301179603;14960,20963!GO:0005770;late endosome;0.0077224873319607;15000,14961!GO:0005886;plasma membrane;0.00988843316140974;15000,14961,15002,12522,14960,20963,12478,16416!GO:0044459;plasma membrane part;0.0114310786246954;15000,14961,14960,20963,15002,16416,12478!GO:0002376;immune system process;0.0149747073540423;15000,14961,14960,20963,15002!GO:0050870;positive regulation of T cell activation;0.0149747073540423;14960,20963!GO:0046645;positive regulation of gamma-delta T cell activation;0.0149747073540423;20963!GO:0045586;regulation of gamma-delta T cell differentiation;0.0149747073540423;20963!GO:0008418;protein N-terminal asparagine amidohydrolase activity;0.0149747073540423;18203!GO:0045588;positive regulation of gamma-delta T cell differentiation;0.0149747073540423;20963!GO:0046643;regulation of gamma-delta T cell activation;0.0149747073540423;20963!GO:0030305;heparanase activity;0.0149747073540423;15442!GO:0006955;immune response;0.0212197630768982;14961,14960,20963,15002!GO:0051251;positive regulation of lymphocyte activation;0.0240930797130199;14960,20963!GO:0030217;T cell differentiation;0.0240930797130199;14960,20963!GO:0050863;regulation of T cell activation;0.0240930797130199;14960,20963!GO:0043366;beta selection;0.0240930797130199;20963!GO:0046629;gamma-delta T cell activation;0.0240930797130199;20963!GO:0008432;JUN kinase binding;0.0240930797130199;21815!GO:0042492;gamma-delta T cell differentiation;0.0240930797130199;20963!GO:0043235;receptor complex;0.029038299686153;20963,16416!GO:0032632;interleukin-3 production;0.029038299686153;20963!GO:0045423;regulation of granulocyte macrophage colony-stimulating factor biosynthetic process;0.029038299686153;20963!GO:0042223;interleukin-3 biosynthetic process;0.029038299686153;20963!GO:0046638;positive regulation of alpha-beta T cell differentiation;0.029038299686153;20963!GO:0045399;regulation of interleukin-3 biosynthetic process;0.029038299686153;20963!GO:0032604;granulocyte macrophage colony-stimulating factor production;0.029038299686153;20963!GO:0045425;positive regulation of granulocyte macrophage colony-stimulating factor biosynthetic process;0.029038299686153;20963!GO:0045401;positive regulation of interleukin-3 biosynthetic process;0.029038299686153;20963!GO:0042253;granulocyte macrophage colony-stimulating factor biosynthetic process;0.029038299686153;20963!GO:0051249;regulation of lymphocyte activation;0.0319209438575822;14960,20963!GO:0050865;regulation of cell activation;0.0334504558785296;14960,20963!GO:0043306;positive regulation of mast cell degranulation;0.0334504558785296;20963!GO:0046637;regulation of alpha-beta T cell differentiation;0.0334504558785296;20963!GO:0043304;regulation of mast cell degranulation;0.0334504558785296;20963!GO:0001820;serotonin secretion;0.0334504558785296;20963!GO:0008534;oxidized purine base lesion DNA N-glycosylase activity;0.0334504558785296;72774!GO:0043302;positive regulation of leukocyte degranulation;0.0334504558785296;20963!GO:0030098;lymphocyte differentiation;0.0338301193238895;14960,20963!GO:0004716;receptor signaling protein tyrosine kinase activity;0.0362601119580879;20963!GO:0004067;asparaginase activity;0.0362601119580879;18203!GO:0044440;endosomal part;0.0362601119580879;15000!GO:0043300;regulation of leukocyte degranulation;0.0362601119580879;20963!GO:0000702;oxidized base lesion DNA N-glycosylase activity;0.0362601119580879;72774!GO:0045579;positive regulation of B cell differentiation;0.0362601119580879;20963!GO:0010008;endosome membrane;0.0362601119580879;15000!GO:0007044;cell-substrate junction assembly;0.0362601119580879;16416!GO:0016798;hydrolase activity, acting on glycosyl bonds;0.0401820961298792;15442,72774!GO:0045921;positive regulation of exocytosis;0.0413185711777597;20963!GO:0019815;B cell receptor complex;0.0413185711777597;20963!GO:0003823;antigen binding;0.0413185711777597;14961,14960!GO:0042110;T cell activation;0.0436502832841474;14960,20963!GO:0005765;lysosomal membrane;0.0436502832841474;15000!GO:0050853;B cell receptor signaling pathway;0.0436502832841474;20963!GO:0043303;mast cell degranulation;0.0436502832841474;20963!GO:0002448;mast cell mediated immunity;0.0436502832841474;20963!GO:0003906;DNA-(apurinic or apyrimidinic site) lyase activity;0.0436502832841474;72774!GO:0046641;positive regulation of alpha-beta T cell proliferation;0.0436502832841474;20963!GO:0002521;leukocyte differentiation;0.0473977546165589;14960,20963!GO:0001958;endochondral ossification;0.0477832998932027;17260!GO:0046635;positive regulation of alpha-beta T cell activation;0.0477832998932027;20963!GO:0042277;peptide binding;0.0477832998932027;14961,14960!
|ontology_enrichment_celltype=CL:0000553!8.72e-30!6;CL:0000556!8.72e-30!6;CL:0000050!4.69e-20!9;CL:0000839!4.85e-14!13;CL:0000945!1.20e-12!1;CL:0000236!1.20e-12!1;CL:0000826!1.20e-12!1;CL:0000763!1.71e-11!16;CL:0002031!2.38e-11!25;CL:0000049!9.64e-10!19;CL:0000988!6.56e-09!32;CL:0002032!6.56e-09!32;CL:0000037!6.56e-09!32;CL:0000566!6.56e-09!32;CL:0000837!6.56e-09!32
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0000029!4.30e-12!1;UBERON:0001097!4.30e-12!1;UBERON:0003968!4.30e-12!1;UBERON:0001467!4.30e-12!1;UBERON:0002371!1.71e-11!16;UBERON:0002193!4.01e-11!48;UBERON:0002405!4.01e-11!48;UBERON:0002390!8.21e-09!45;UBERON:0003061!8.21e-09!45;UBERON:0001474!1.83e-08!22;UBERON:0004765!1.83e-08!22;UBERON:0001434!1.83e-08!22;UBERON:0002106!4.75e-08!6;UBERON:0004457!4.75e-08!6;UBERON:0000042!4.75e-08!6;UBERON:0004854!4.75e-08!6;UBERON:0009034!4.75e-08!6;UBERON:0002095!4.75e-08!6;UBERON:0004782!4.75e-08!6;UBERON:0003281!4.75e-08!6;UBERON:0009664!4.75e-08!6;UBERON:0002296!4.75e-08!6;UBERON:0005602!4.75e-08!6;UBERON:0001179!4.75e-08!6;UBERON:0006293!4.75e-08!6
}}

Latest revision as of 14:35, 17 September 2013


Phase1 CAGE Peaks

 Short description
Mm9::chr10:39133332..39133342,+p@chr10:39133332..39133342
+
Mm9::chr10:59681684..59681695,+p@chr10:59681684..59681695
+
Mm9::chr10:9452353..9452356,+p@chr10:9452353..9452356
+
Mm9::chr11:102294200..102294224,+p17@Grn
Mm9::chr11:103274384..103274407,-p3@Plekhm1
Mm9::chr11:104443407..104443421,+p11@Myl4
Mm9::chr11:104444189..104444213,+p@chr11:104444189..104444213
+
Mm9::chr11:104498663..104498679,+p4@Itgb3
Mm9::chr11:106167344..106167354,+p@chr11:106167344..106167354
+
Mm9::chr11:11592006..11592012,+p@chr11:11592006..11592012
+
Mm9::chr11:118080347..118080361,-p13@Cyth1
Mm9::chr11:44431567..44431571,-p@chr11:44431567..44431571
-
Mm9::chr11:44432080..44432093,+p@chr11:44432080..44432093
+
Mm9::chr11:44763902..44763910,-p@chr11:44763902..44763910
-
Mm9::chr11:45486700..45486702,+p@chr11:45486700..45486702
+
Mm9::chr11:48652030..48652044,-p@chr11:48652030..48652044
-
Mm9::chr11:48652047..48652061,-p@chr11:48652047..48652061
-
Mm9::chr11:57916364..57916376,+p@chr11:57916364..57916376
+
Mm9::chr11:57916408..57916419,+p@chr11:57916408..57916419
+
Mm9::chr11:83550809..83550821,-p@chr11:83550809..83550821
-
Mm9::chr11:98319611..98319621,+p@chr11:98319611..98319621
+
Mm9::chr11:99029840..99029849,+p@chr11:99029840..99029849
+
Mm9::chr12:103213576..103213581,+p@chr12:103213576..103213581
+
Mm9::chr12:114100377..114100384,+p@chr12:114100377..114100384
+
Mm9::chr12:114659852..114659872,+p@chr12:114659852..114659872
+
Mm9::chr12:36397620..36397624,+p@chr12:36397620..36397624
+
Mm9::chr12:80743813..80743844,-p@chr12:80743813..80743844
-
Mm9::chr12:80744010..80744014,+p@chr12:80744010..80744014
+
Mm9::chr12:81216190..81216212,-p@chr12:81216190..81216212
-
Mm9::chr12:81217906..81217928,-p@chr12:81217906..81217928
-
Mm9::chr12:83345629..83345660,+p@chr12:83345629..83345660
+
Mm9::chr12:87314627..87314636,-p@chr12:87314627..87314636
-
Mm9::chr13:103482045..103482051,+p@chr13:103482045..103482051
+
Mm9::chr13:103483455..103483461,-p@chr13:103483455..103483461
-
Mm9::chr13:112658212..112658227,+p3@ENSMUST00000128198
p3@uc007rwb.1
Mm9::chr13:112773234..112773267,+p@chr13:112773234..112773267
+
Mm9::chr13:112790239..112790251,+p@chr13:112790239..112790251
+
Mm9::chr13:112791395..112791403,-p@chr13:112791395..112791403
-
Mm9::chr13:24814455..24814457,+p@chr13:24814455..24814457
+
Mm9::chr13:30853531..30853540,+p@chr13:30853531..30853540
+
Mm9::chr13:30856430..30856442,+p@chr13:30856430..30856442
+
Mm9::chr13:3536910..3536913,-p@chr13:3536910..3536913
-
Mm9::chr13:43860616..43860632,-p@chr13:43860616..43860632
-
Mm9::chr13:43860874..43860899,+p@chr13:43860874..43860899
+
Mm9::chr13:43860904..43860917,+p@chr13:43860904..43860917
+
Mm9::chr13:43880537..43880572,+p1@Cd83
Mm9::chr13:52678028..52678046,+p8@Syk
Mm9::chr13:52678090..52678104,+p13@Syk
Mm9::chr13:52678161..52678173,+p22@Syk
Mm9::chr13:52678181..52678188,+p27@Syk
Mm9::chr13:83664747..83664756,+p@chr13:83664747..83664756
+
Mm9::chr13:83714156..83714178,-p@chr13:83714156..83714178
-
Mm9::chr13:83714297..83714301,+p@chr13:83714297..83714301
+
Mm9::chr14:63996708..63996735,-p@chr14:63996708..63996735
-
Mm9::chr14:64035812..64035819,+p@chr14:64035812..64035819
+
Mm9::chr14:64037284..64037311,-p@chr14:64037284..64037311
-
Mm9::chr14:64037657..64037672,-p@chr14:64037657..64037672
-
Mm9::chr14:64038376..64038404,-p@chr14:64038376..64038404
-
Mm9::chr14:64056905..64056919,-p@chr14:64056905..64056919
-
Mm9::chr14:66851190..66851197,-p@chr14:66851190..66851197
-
Mm9::chr14:70468933..70468936,-p@chr14:70468933..70468936
-
Mm9::chr14:73733914..73733928,+p@chr14:73733914..73733928
+
Mm9::chr14:8946910..8946950,-p@chr14:8946910..8946950
-
Mm9::chr15:27700724..27700733,+p@chr15:27700724..27700733
+
Mm9::chr15:27700740..27700751,+p@chr15:27700740..27700751
+
Mm9::chr15:27702002..27702019,-p@chr15:27702002..27702019
-
Mm9::chr15:27756368..27756373,+p@chr15:27756368..27756373
+
Mm9::chr15:62009817..62009841,+p@chr15:62009817..62009841
+
Mm9::chr15:62013300..62013316,+p@chr15:62013300..62013316
+
Mm9::chr15:72986001..72986008,+p@chr15:72986001..72986008
+
Mm9::chr15:72986015..72986020,+p@chr15:72986015..72986020
+
Mm9::chr15:72986026..72986036,+p@chr15:72986026..72986036
+
Mm9::chr15:72986987..72987034,-p@chr15:72986987..72987034
-
Mm9::chr15:72987634..72987657,-p@chr15:72987634..72987657
-
Mm9::chr15:72992657..72992663,-p@chr15:72992657..72992663
-
Mm9::chr15:74756547..74756551,+p@chr15:74756547..74756551
+
Mm9::chr15:86013334..86013346,+p@chr15:86013334..86013346
+
Mm9::chr15:96291868..96291885,+p@chr15:96291868..96291885
+
Mm9::chr15:96304878..96304899,-p@chr15:96304878..96304899
-
Mm9::chr16:11077959..11077984,+p@chr16:11077959..11077984
+
Mm9::chr16:13818948..13818976,+p2@Ntan1
Mm9::chr16:19179599..19179640,+p@chr16:19179599..19179640
+
Mm9::chr16:19762056..19762062,+p@chr16:19762056..19762062
+
Mm9::chr16:36712121..36712130,+p@chr16:36712121..36712130
+
Mm9::chr16:36717810..36717842,+p@chr16:36717810..36717842
+
Mm9::chr17:31211635..31211656,-p@chr17:31211635..31211656
-
Mm9::chr17:33032387..33032399,-p@chr17:33032387..33032399
-
Mm9::chr17:34282170..34282175,+p8@H2-DMb2
Mm9::chr17:34376649..34376663,-p@chr17:34376649..34376663
-
Mm9::chr17:34376665..34376680,-p@chr17:34376665..34376680
-
Mm9::chr17:34376816..34376826,+p4@H2-Ob
Mm9::chr17:34376960..34377002,+p3@H2-Ob
Mm9::chr17:34394822..34394833,+p@chr17:34394822..34394833
+
Mm9::chr17:34394879..34394910,+p@chr17:34394879..34394910
+
Mm9::chr17:34398558..34398572,-p@chr17:34398558..34398572
-
Mm9::chr17:34398575..34398589,-p@chr17:34398575..34398589
-
Mm9::chr17:34398746..34398774,+p@chr17:34398746..34398774
+
Mm9::chr17:34398792..34398796,+p@chr17:34398792..34398796
+
Mm9::chr17:34398798..34398803,+p@chr17:34398798..34398803
+
Mm9::chr17:34399992..34400001,-p@chr17:34399992..34400001
-
Mm9::chr17:34400036..34400056,-p@chr17:34400036..34400056
-
Mm9::chr17:34401187..34401229,+p14@H2-Ab1
Mm9::chr17:34401342..34401355,+p16@H2-Ab1
Mm9::chr17:34401774..34401817,-p@chr17:34401774..34401817
-
Mm9::chr17:34401939..34401960,-p@chr17:34401939..34401960
-
Mm9::chr17:34404272..34404290,+p5@H2-Ab1
Mm9::chr17:34404447..34404457,+p7@H2-Ab1
Mm9::chr17:34404492..34404513,+p2@H2-Ab1
Mm9::chr17:34404864..34404875,+p8@H2-Ab1
Mm9::chr17:34404912..34404919,+p13@H2-Ab1
Mm9::chr17:34406169..34406208,-p@chr17:34406169..34406208
-
Mm9::chr17:34406267..34406282,-p@chr17:34406267..34406282
-
Mm9::chr17:34406308..34406333,-p@chr17:34406308..34406333
-
Mm9::chr17:34406352..34406355,-p@chr17:34406352..34406355
-
Mm9::chr17:34419832..34419841,-p@chr17:34419832..34419841
-
Mm9::chr17:34419860..34419871,-p@chr17:34419860..34419871
-
Mm9::chr17:34423136..34423144,+p@chr17:34423136..34423144
+
Mm9::chr17:34424055..34424098,-p3@H2-Aa
Mm9::chr17:34424916..34424928,+p@chr17:34424916..34424928
+
Mm9::chr17:34424937..34424966,-p2@H2-Aa
Mm9::chr17:34424964..34424970,+p@chr17:34424964..34424970
+
Mm9::chr17:34428622..34428661,-p@chr17:34428622..34428661
-
Mm9::chr17:34428763..34428773,+p@chr17:34428763..34428773
+
Mm9::chr17:34428799..34428800,+p@chr17:34428799..34428800
+
Mm9::chr17:34430368..34430375,-p@chr17:34430368..34430375
-
Mm9::chr17:34430786..34430793,+p@chr17:34430786..34430793
+
Mm9::chr17:34430813..34430825,+p@chr17:34430813..34430825
+
Mm9::chr17:34430851..34430862,+p@chr17:34430851..34430862
+
Mm9::chr17:34430866..34430879,+p@chr17:34430866..34430879
+
Mm9::chr17:34433051..34433065,-p@chr17:34433051..34433065
-
Mm9::chr17:34433110..34433123,-p@chr17:34433110..34433123
-
Mm9::chr17:34436592..34436620,+p@chr17:34436592..34436620
+
Mm9::chr17:34437805..34437821,+p@chr17:34437805..34437821
+
Mm9::chr17:34438090..34438108,-p@chr17:34438090..34438108
-
Mm9::chr17:34438137..34438151,-p@chr17:34438137..34438151
-
Mm9::chr17:34438409..34438427,+p@chr17:34438409..34438427
+
Mm9::chr17:34441807..34441816,-p@chr17:34441807..34441816
-
Mm9::chr17:34441954..34441959,+p@chr17:34441954..34441959
+
Mm9::chr17:34441986..34442007,+p@chr17:34441986..34442007
+
Mm9::chr17:34442013..34442020,+p@chr17:34442013..34442020
+
Mm9::chr17:34443531..34443546,+p@chr17:34443531..34443546
+
Mm9::chr17:34443593..34443600,+p@chr17:34443593..34443600
+
Mm9::chr17:34443608..34443617,+p@chr17:34443608..34443617
+
Mm9::chr17:34443692..34443705,+p@chr17:34443692..34443705
+
Mm9::chr17:34452031..34452042,+p@chr17:34452031..34452042
+
Mm9::chr17:34484604..34484623,-p@chr17:34484604..34484623
-
Mm9::chr17:48439277..48439290,+p8@Treml2
Mm9::chr17:50320568..50320576,+p@chr17:50320568..50320576
+
Mm9::chr17:50321876..50321895,-p@chr17:50321876..50321895
-
Mm9::chr17:50657405..50657411,+p@chr17:50657405..50657411
+
Mm9::chr17:5803335..5803362,-p@chr17:5803335..5803362
-
Mm9::chr17:5803910..5803923,+p@chr17:5803910..5803923
+
Mm9::chr17:5804621..5804633,+p@chr17:5804621..5804633
+
Mm9::chr17:5804655..5804661,+p@chr17:5804655..5804661
+
Mm9::chr17:7020935..7020955,+p@chr17:7020935..7020955
+
Mm9::chr17:7032818..7032832,+p@chr17:7032818..7032832
+
Mm9::chr17:71201096..71201114,-p6@Tgif1
Mm9::chr17:75904423..75904434,-p@chr17:75904423..75904434
-
Mm9::chr17:8388813..8388822,+p@chr17:8388813..8388822
+
Mm9::chr17:8388829..8388841,+p@chr17:8388829..8388841
+
Mm9::chr17:8431195..8431202,+p@chr17:8431195..8431202
+
Mm9::chr17:88442036..88442081,+p@chr17:88442036..88442081
+
Mm9::chr17:88511431..88511453,+p@chr17:88511431..88511453
+
Mm9::chr17:88590349..88590360,+p@chr17:88590349..88590360
+
Mm9::chr18:3280995..3281013,-p23@Crem
Mm9::chr18:49932229..49932239,-p@chr18:49932229..49932239
-
Mm9::chr18:49932446..49932479,+p@chr18:49932446..49932479
+
Mm9::chr18:54037378..54037410,+p@chr18:54037378..54037410
+
Mm9::chr18:60965596..60965622,+p@chr18:60965596..60965622
+
Mm9::chr18:60966651..60966678,+p@chr18:60966651..60966678
+
Mm9::chr18:60967731..60967738,-p@chr18:60967731..60967738
-
Mm9::chr18:60971893..60971916,-p@chr18:60971893..60971916
-
Mm9::chr18:60971922..60971931,+p@chr18:60971922..60971931
+
Mm9::chr18:60972002..60972009,-p@chr18:60972002..60972009
-
Mm9::chr18:60972126..60972144,-p@chr18:60972126..60972144
-
Mm9::chr18:60972149..60972183,-p@chr18:60972149..60972183
-
Mm9::chr18:60972189..60972216,-p@chr18:60972189..60972216
-
Mm9::chr18:60972211..60972220,+p@chr18:60972211..60972220
+
Mm9::chr18:60972250..60972259,-p@chr18:60972250..60972259
-
Mm9::chr18:60972295..60972303,-p@chr18:60972295..60972303
-
Mm9::chr18:86771357..86771368,+p@chr18:86771357..86771368
+
Mm9::chr19:11559830..11559844,-p@chr19:11559830..11559844
-
Mm9::chr19:11569065..11569093,-p@chr19:11569065..11569093
-
Mm9::chr19:32829406..32829411,+p@chr19:32829406..32829411
+
Mm9::chr19:38100307..38100320,-p@chr19:38100307..38100320
-
Mm9::chr19:44451271..44451287,+p@chr19:44451271..44451287
+
Mm9::chr19:44452684..44452696,-p@chr19:44452684..44452696
-
Mm9::chr19:44463006..44463065,-p@chr19:44463006..44463065
-
Mm9::chr19:44482510..44482528,+p@chr19:44482510..44482528
+
Mm9::chr1:130504551..130504563,-p@chr1:130504551..130504563
-
Mm9::chr1:132747310..132747319,+p@chr1:132747310..132747319
+
Mm9::chr1:132770742..132770748,+p@chr1:132770742..132770748
+
Mm9::chr1:132772734..132772738,-p@chr1:132772734..132772738
-
Mm9::chr1:155152147..155152159,+p1@ENSMUST00000110797
Mm9::chr1:161922703..161922705,+p@chr1:161922703..161922705
+
Mm9::chr1:161977629..161977639,-p@chr1:161977629..161977639
-
Mm9::chr1:161977641..161977648,-p@chr1:161977641..161977648
-
Mm9::chr1:162177746..162177768,-p@chr1:162177746..162177768
-
Mm9::chr1:182129930..182129947,+p@chr1:182129930..182129947
+
Mm9::chr1:182471696..182471746,+p@chr1:182471696..182471746
+
Mm9::chr1:38959711..38959736,+p@chr1:38959711..38959736
+
Mm9::chr1:75521563..75521574,+p@chr1:75521563..75521574
+
Mm9::chr1:85102664..85102668,+p2@ENSMUST00000162353
p2@uc007btk.1
p2@uc007btl.1
p2@uc007btm.1
Mm9::chr1:87497225..87497236,+p6@Gm2427
p6@Sp140
Mm9::chr1:87497247..87497279,+p2@Gm2427
p2@Sp140
Mm9::chr1:87501082..87501114,-p@chr1:87501082..87501114
-
Mm9::chr1:89522086..89522106,+p@chr1:89522086..89522106
+
Mm9::chr1:89547224..89547250,-p@chr1:89547224..89547250
-
Mm9::chr2:163456664..163456677,+p@chr2:163456664..163456677
+
Mm9::chr2:6177330..6177334,-p@chr2:6177330..6177334
-
Mm9::chr2:70769189..70769223,+p@chr2:70769189..70769223
+
Mm9::chr2:93003092..93003108,-p@chr2:93003092..93003108
-
Mm9::chr3:153684303..153684310,+p@chr3:153684303..153684310
+
Mm9::chr3:52200465..52200474,+p@chr3:52200465..52200474
+
Mm9::chr3:52438368..52438377,-p@chr3:52438368..52438377
-
Mm9::chr3:52438406..52438413,-p@chr3:52438406..52438413
-
Mm9::chr3:52558967..52558978,-p@chr3:52558967..52558978
-
Mm9::chr3:58321410..58321423,+p@chr3:58321410..58321423
+
Mm9::chr3:58321459..58321468,+p@chr3:58321459..58321468
+
Mm9::chr3:83843300..83843304,+p@chr3:83843300..83843304
+
Mm9::chr3:95776380..95776402,+p@chr3:95776380..95776402
+
Mm9::chr4:108133424..108133447,+p@chr4:108133424..108133447
+
Mm9::chr4:120687224..120687245,-p@chr4:120687224..120687245
-
Mm9::chr4:130471927..130471934,+p@chr4:130471927..130471934
+
Mm9::chr4:132715162..132715169,-p@chr4:132715162..132715169
-
Mm9::chr4:132715176..132715188,-p@chr4:132715176..132715188
-
Mm9::chr4:132715206..132715215,-p@chr4:132715206..132715215
-
Mm9::chr4:135637900..135637922,+p@chr4:135637900..135637922
+
Mm9::chr4:32254258..32254280,-p@chr4:32254258..32254280
-
Mm9::chr4:32307111..32307115,+p@chr4:32307111..32307115
+
Mm9::chr4:44539619..44539621,-p@chr4:44539619..44539621
-
Mm9::chr4:44718315..44718319,+p@chr4:44718315..44718319
+
Mm9::chr4:44723786..44723790,+p@chr4:44723786..44723790
+
Mm9::chr5:101028282..101028287,-p@chr5:101028282..101028287
-
Mm9::chr5:101109088..101109124,-p@chr5:101109088..101109124
-
Mm9::chr5:106113365..106113380,+p@chr5:106113365..106113380
+
Mm9::chr5:108370506..108370532,+p@chr5:108370506..108370532
+
Mm9::chr5:113874732..113874736,+p@chr5:113874732..113874736
+
Mm9::chr5:118360032..118360038,+p@chr5:118360032..118360038
+
Mm9::chr5:148150622..148150656,-p@chr5:148150622..148150656
-
Mm9::chr5:99765779..99765787,+p@chr5:99765779..99765787
+
Mm9::chr5:99765795..99765803,+p@chr5:99765795..99765803
+
Mm9::chr6:70676861..70676881,-p@chr6:70676861..70676881
-
Mm9::chr6:70694000..70694011,-p@chr6:70694000..70694011
-
Mm9::chr6:8454114..8454125,+p@chr6:8454114..8454125
+
Mm9::chr6:90714417..90714448,+p@chr6:90714417..90714448
+
Mm9::chr6:99003463..99003469,+p@chr6:99003463..99003469
+
Mm9::chr6:99007289..99007325,-p@chr6:99007289..99007325
-
Mm9::chr6:99139076..99139100,+p@chr6:99139076..99139100
+
Mm9::chr6:99250293..99250307,-p@chr6:99250293..99250307
-
Mm9::chr6:99284326..99284351,-p@chr6:99284326..99284351
-
Mm9::chr6:99290540..99290551,+p@chr6:99290540..99290551
+
Mm9::chr7:133551963..133551966,+p@chr7:133551963..133551966
+
Mm9::chr7:133555720..133555743,-p@chr7:133555720..133555743
-
Mm9::chr7:133558306..133558315,-p4@Cd19
Mm9::chr7:25684141..25684152,+p@chr7:25684141..25684152
+
Mm9::chr7:25684171..25684185,+p@chr7:25684171..25684185
+
Mm9::chr7:29612650..29612651,+p@chr7:29612650..29612651
+
Mm9::chr7:51786904..51786948,+p@chr7:51786904..51786948
+
Mm9::chr8:108576981..108576998,+p@chr8:108576981..108576998
+
Mm9::chr8:108578502..108578511,+p@chr8:108578502..108578511
+
Mm9::chr8:126477650..126477653,-p@chr8:126477650..126477653
-
Mm9::chr8:126477670..126477676,-p@chr8:126477670..126477676
-
Mm9::chr8:126477910..126477941,+p@chr8:126477910..126477941
+
Mm9::chr8:26163314..26163320,-p@chr8:26163314..26163320
-
Mm9::chr8:26215263..26215278,-p@chr8:26215263..26215278
-
Mm9::chr8:26228712..26228754,+p@chr8:26228712..26228754
+
Mm9::chr8:26229551..26229567,-p@chr8:26229551..26229567
-
Mm9::chr8:48019831..48019868,+p@chr8:48019831..48019868
+
Mm9::chr8:86272074..86272079,-p@chr8:86272074..86272079
-
Mm9::chr8:95073172..95073173,+p@chr8:95073172..95073173
+
Mm9::chr9:105560809..105560819,+p@chr9:105560809..105560819
+
Mm9::chr9:105560828..105560835,+p@chr9:105560828..105560835
+
Mm9::chr9:108960229..108960237,-p@chr9:108960229..108960237
-
Mm9::chr9:115408759..115408777,-p@chr9:115408759..115408777
-
Mm9::chr9:116128090..116128095,-p@chr9:116128090..116128095
-
Mm9::chr9:13639945..13639948,+p@chr9:13639945..13639948
+
Mm9::chr9:32425275..32425296,+p@chr9:32425275..32425296
+
Mm9::chr9:32460087..32460095,+p@chr9:32460087..32460095
+
Mm9::chr9:41946897..41946902,+p@chr9:41946897..41946902
+
Mm9::chr9:44330218..44330249,+p@chr9:44330218..44330249
+
Mm9::chr9:44381518..44381530,-p@chr9:44381518..44381530
-
Mm9::chr9:50582324..50582332,+p@chr9:50582324..50582332
+
Mm9::chr9:51024124..51024131,-p@chr9:51024124..51024131
-
Mm9::chr9:56996024..56996047,-p6@Neil1
Mm9::chr9:64645511..64645518,+p@chr9:64645511..64645518
+
Mm9::chrX:106392111..106392133,+p1@Gm6377
Mm9::chrX:106392141..106392157,+p2@Gm6377
Mm9::chrX:106392161..106392168,+p4@Gm6377
Mm9::chrX:11656395..11656402,-p@chrX:11656395..11656402
-
Mm9::chrX:163529882..163529910,-p@chrX:163529882..163529910
-


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0042613MHC class II protein complex1.55191553180717e-07
GO:0002504antigen processing and presentation of peptide or polysaccharide antigen via MHC class II9.06295233755402e-07
GO:0042611MHC protein complex2.7204030597921e-06
GO:0019882antigen processing and presentation4.49653694636479e-05
GO:0019886antigen processing and presentation of exogenous peptide antigen via MHC class II4.58353864721288e-05
GO:0002495antigen processing and presentation of peptide antigen via MHC class II4.58353864721288e-05
GO:0002478antigen processing and presentation of exogenous peptide antigen4.58353864721288e-05
GO:0005764lysosome4.58353864721288e-05
GO:0000323lytic vacuole4.58353864721288e-05
GO:0005773vacuole7.32728327283874e-05
GO:0019884antigen processing and presentation of exogenous antigen8.05484079028954e-05
GO:0048002antigen processing and presentation of peptide antigen0.000247572829146773
GO:0009897external side of plasma membrane0.000451747479939822
GO:0043234protein complex0.000533363449890323
GO:0005771multivesicular body0.00122866523670196
GO:0009986cell surface0.00122866523670196
GO:0042605peptide antigen binding0.00165446978722749
GO:0045582positive regulation of T cell differentiation0.00187383336418751
GO:0032991macromolecular complex0.00249064539573452
GO:0045621positive regulation of lymphocyte differentiation0.00267770237827564
GO:0045580regulation of T cell differentiation0.00329876706340969
GO:0045619regulation of lymphocyte differentiation0.00583468301179603
GO:0005770late endosome0.0077224873319607
GO:0005886plasma membrane0.00988843316140974
GO:0044459plasma membrane part0.0114310786246954
GO:0002376immune system process0.0149747073540423
GO:0050870positive regulation of T cell activation0.0149747073540423
GO:0046645positive regulation of gamma-delta T cell activation0.0149747073540423
GO:0045586regulation of gamma-delta T cell differentiation0.0149747073540423
GO:0008418protein N-terminal asparagine amidohydrolase activity0.0149747073540423
GO:0045588positive regulation of gamma-delta T cell differentiation0.0149747073540423
GO:0046643regulation of gamma-delta T cell activation0.0149747073540423
GO:0030305heparanase activity0.0149747073540423
GO:0006955immune response0.0212197630768982
GO:0051251positive regulation of lymphocyte activation0.0240930797130199
GO:0030217T cell differentiation0.0240930797130199
GO:0050863regulation of T cell activation0.0240930797130199
GO:0043366beta selection0.0240930797130199
GO:0046629gamma-delta T cell activation0.0240930797130199
GO:0008432JUN kinase binding0.0240930797130199
GO:0042492gamma-delta T cell differentiation0.0240930797130199
GO:0043235receptor complex0.029038299686153
GO:0032632interleukin-3 production0.029038299686153
GO:0045423regulation of granulocyte macrophage colony-stimulating factor biosynthetic process0.029038299686153
GO:0042223interleukin-3 biosynthetic process0.029038299686153
GO:0046638positive regulation of alpha-beta T cell differentiation0.029038299686153
GO:0045399regulation of interleukin-3 biosynthetic process0.029038299686153
GO:0032604granulocyte macrophage colony-stimulating factor production0.029038299686153
GO:0045425positive regulation of granulocyte macrophage colony-stimulating factor biosynthetic process0.029038299686153
GO:0045401positive regulation of interleukin-3 biosynthetic process0.029038299686153
GO:0042253granulocyte macrophage colony-stimulating factor biosynthetic process0.029038299686153
GO:0051249regulation of lymphocyte activation0.0319209438575822
GO:0050865regulation of cell activation0.0334504558785296
GO:0043306positive regulation of mast cell degranulation0.0334504558785296
GO:0046637regulation of alpha-beta T cell differentiation0.0334504558785296
GO:0043304regulation of mast cell degranulation0.0334504558785296
GO:0001820serotonin secretion0.0334504558785296
GO:0008534oxidized purine base lesion DNA N-glycosylase activity0.0334504558785296
GO:0043302positive regulation of leukocyte degranulation0.0334504558785296
GO:0030098lymphocyte differentiation0.0338301193238895
GO:0004716receptor signaling protein tyrosine kinase activity0.0362601119580879
GO:0004067asparaginase activity0.0362601119580879
GO:0044440endosomal part0.0362601119580879
GO:0043300regulation of leukocyte degranulation0.0362601119580879
GO:0000702oxidized base lesion DNA N-glycosylase activity0.0362601119580879
GO:0045579positive regulation of B cell differentiation0.0362601119580879
GO:0010008endosome membrane0.0362601119580879
GO:0007044cell-substrate junction assembly0.0362601119580879
GO:0016798hydrolase activity, acting on glycosyl bonds0.0401820961298792
GO:0045921positive regulation of exocytosis0.0413185711777597
GO:0019815B cell receptor complex0.0413185711777597
GO:0003823antigen binding0.0413185711777597
GO:0042110T cell activation0.0436502832841474
GO:0005765lysosomal membrane0.0436502832841474
GO:0050853B cell receptor signaling pathway0.0436502832841474
GO:0043303mast cell degranulation0.0436502832841474
GO:0002448mast cell mediated immunity0.0436502832841474
GO:0003906DNA-(apurinic or apyrimidinic site) lyase activity0.0436502832841474
GO:0046641positive regulation of alpha-beta T cell proliferation0.0436502832841474
GO:0002521leukocyte differentiation0.0473977546165589
GO:0001958endochondral ossification0.0477832998932027
GO:0046635positive regulation of alpha-beta T cell activation0.0477832998932027
GO:0042277peptide binding0.0477832998932027



Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>

Uber Anatomy
Ontology termp-valuen
lymph node4.30e-121
axillary lymph node4.30e-121
peripheral lymph node4.30e-121
shoulder4.30e-121
bone marrow1.71e-1116
hemolymphoid system4.01e-1148
immune system4.01e-1148
hematopoietic system8.21e-0945
blood island8.21e-0945
bone element1.83e-0822
skeletal element1.83e-0822
skeletal system1.83e-0822
spleen4.75e-086
cavity lining4.75e-086
serous membrane4.75e-086
gastrointestinal system mesentery4.75e-086
stomach region4.75e-086
mesentery4.75e-086
gastrointestinal system serosa4.75e-086
mesentery of stomach4.75e-086
gut mesentery4.75e-086
dorsal mesentery4.75e-086
dorsal mesogastrium4.75e-086
peritoneal cavity4.75e-086
spleen primordium4.75e-086


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)
MA0003.10
MA0004.11.47383
MA0006.10.000109581
MA0007.10.0321817
MA0009.10.2179
MA0014.10
MA0017.11.35765
MA0019.10.0147574
MA0024.10.00846249
MA0025.10.456381
MA0027.10.97988
MA0028.12.3855e-06
MA0029.10.231689
MA0030.10.243574
MA0031.10.639127
MA0038.10.0615738
MA0040.10.394541
MA0041.10.818547
MA0042.10.96891
MA0043.11.5795
MA0046.10.277556
MA0048.10.00535184
MA0050.12.23277
MA0051.12.06684
MA0052.11.85872
MA0055.10.000533258
MA0056.10
MA0057.10.000775062
MA0058.11.2003
MA0059.10.513615
MA0060.10.0979678
MA0061.14.56215
MA0063.10
MA0066.10.317472
MA0067.10.39639
MA0068.10.05252
MA0069.10.414831
MA0070.10.123708
MA0071.10.368073
MA0072.10.371588
MA0073.16.61674e-11
MA0074.10.406331
MA0076.16.19647e-05
MA0077.10.323275
MA0078.10.266283
MA0081.11.30775
MA0083.10.105251
MA0084.10.184974
MA0087.10.168451
MA0088.10.00343559
MA0089.10
MA0090.10.180761
MA0091.10.357251
MA0092.10.181701
MA0093.11.93678
MA0095.10
MA0098.10
MA0100.10.0229542
MA0101.12.58194
MA0103.11.04605
MA0105.10.639821
MA0106.10.00142577
MA0107.16.71745
MA0108.20.0986561
MA0109.10
MA0111.10.0286504
MA0113.10.139173
MA0114.10.329009
MA0115.10.905683
MA0116.10.522068
MA0117.10.336072
MA0119.10.583327
MA0122.10.376194
MA0124.10.317359
MA0125.10.693356
MA0130.10
MA0131.10.0346633
MA0132.10
MA0133.10
MA0135.10.135796
MA0136.11.42175
MA0139.10.00124323
MA0140.10.182724
MA0141.10.0521629
MA0142.10.58331
MA0143.10.501413
MA0144.10.0612466
MA0145.14.29148e-05
MA0146.11.43444e-13
MA0147.10.0137901
MA0148.11.4579
MA0149.10.0144264
MA0062.22.85073e-05
MA0035.20.129496
MA0039.20
MA0138.20.306485
MA0002.20.57798
MA0137.20.14166
MA0104.20.00598755
MA0047.21.19685
MA0112.20.000856235
MA0065.20.475694
MA0150.10.417584
MA0151.10
MA0152.10.985404
MA0153.10.304693
MA0154.11.71883
MA0155.10.0155494
MA0156.10.994997
MA0157.11.36543
MA0158.10
MA0159.10.156865
MA0160.10.494767
MA0161.10
MA0162.13.56801e-15
MA0163.11.6857e-08
MA0164.11.19937
MA0080.24.496
MA0018.21.775
MA0099.20.418274
MA0079.20
MA0102.20.215963
MA0258.10.00358594
MA0259.10.0319752
MA0442.10
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