FFCP PHASE1:Mm9::chr2:125549393..125549427,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=271849 | |EntrezGene=271849 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=107 | |MCL_coexpression_id=107 | ||
|TSSclassifier=NA | |||
|UniProt=Q6S5L9 | |UniProt=Q6S5L9 | ||
|association_with_transcript=-270bp_to_ENSMUST00000042246_5end | |association_with_transcript=-270bp_to_ENSMUST00000042246_5end | ||
|cluster_id=chr2:125549393..125549427,- | |||
|description=CAGE_peak_1_at_Shc4_5end | |description=CAGE_peak_1_at_Shc4_5end | ||
|id=chr2:125549393..125549427,- | |id=chr2:125549393..125549427,- | ||
|ontology_enrichment_celltype=CL:0000107!2.19e-08!9 | |ontology_enrichment_celltype=CL:0000107!2.19e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.15e-21,9;CL:0000221,1.24e-18,44;CL:0000133,1.24e-18,44;CL:0002319,4.51e-17,43;CL:0000540,8.61e-13,33;CL:0000047,8.61e-13,33;CL:0000031,8.61e-13,33;CL:0000404,8.61e-13,33;CL:0000393,2.93e-10,39;CL:0000211,2.93e-10,39;CL:0002321,9.22e-10,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.35e-14!102;UBERON:0000924!1.35e-14!102;UBERON:0006601!1.35e-14!102;UBERON:0000073!5.11e-10!75;UBERON:0001016!5.11e-10!75;UBERON:0000010!9.06e-10!11;UBERON:0001017!5.20e-09!73;UBERON:0005743!5.20e-09!73;UBERON:0002410!2.19e-08!9 | |ontology_enrichment_uberon=UBERON:0004121!1.35e-14!102;UBERON:0000924!1.35e-14!102;UBERON:0006601!1.35e-14!102;UBERON:0000073!5.11e-10!75;UBERON:0001016!5.11e-10!75;UBERON:0000010!9.06e-10!11;UBERON:0001017!5.20e-09!73;UBERON:0005743!5.20e-09!73;UBERON:0002410!2.19e-08!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,9.51e-26,11;UBERON:0002410,1.15e-21,9;UBERON:0004121,5.50e-17,95;UBERON:0000924,5.50e-17,95;UBERON:0006601,5.50e-17,95;UBERON:0001016,6.02e-17,75;UBERON:0001017,1.52e-14,73;UBERON:0002240,6.40e-09,6;UBERON:0005174,6.40e-09,6;UBERON:0001137,6.40e-09,6;UBERON:0000011,1.64e-08,3;UBERON:0000013,3.48e-08,3;UBERON:0010313,3.67e-08,3;UBERON:0002342,3.67e-08,3;UBERON:0002005,3.67e-08,3;UBERON:0005428,3.67e-08,3;UBERON:0005062,3.67e-08,3;UBERON:0001948,3.39e-07,5;UBERON:0002315,3.39e-07,5;UBERON:0010371,4.25e-07,73 | |||
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| ||
|short_description=p1@Shc4 | |short_description=p1@Shc4 | ||
}} | }} |
Latest revision as of 15:43, 25 September 2015
Short description: | p1@Shc4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Shc4_5end |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | -270bp_to_ENSMUST00000042246_5end |
EntrezGene: | Shc4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.15e-21 | 9 |
ectodermal cell | 1.24e-18 | 44 |
neurectodermal cell | 1.24e-18 | 44 |
neural cell | 4.51e-17 | 43 |
neuron | 8.61e-13 | 33 |
neuronal stem cell | 8.61e-13 | 33 |
neuroblast | 8.61e-13 | 33 |
electrically signaling cell | 8.61e-13 | 33 |
electrically responsive cell | 2.93e-10 | 39 |
electrically active cell | 2.93e-10 | 39 |
embryonic cell | 9.22e-10 | 70 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 9.51e-26 | 11 |
autonomic nervous system | 1.15e-21 | 9 |
ectoderm-derived structure | 5.50e-17 | 95 |
ectoderm | 5.50e-17 | 95 |
presumptive ectoderm | 5.50e-17 | 95 |
nervous system | 6.02e-17 | 75 |
central nervous system | 1.52e-14 | 73 |
spinal cord | 6.40e-09 | 6 |
dorsal region element | 6.40e-09 | 6 |
dorsum | 6.40e-09 | 6 |
parasympathetic nervous system | 1.64e-08 | 3 |
sympathetic nervous system | 3.48e-08 | 3 |
neural crest-derived structure | 3.67e-08 | 3 |
neural crest | 3.67e-08 | 3 |
enteric nervous system | 3.67e-08 | 3 |
vagal neural crest | 3.67e-08 | 3 |
neural fold | 3.67e-08 | 3 |
regional part of spinal cord | 3.39e-07 | 5 |
gray matter of spinal cord | 3.39e-07 | 5 |
ecto-epithelium | 4.25e-07 | 73 |