FFCP PHASE1:Mm9::chr3:34095664..34095678,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=107 | |MCL_coexpression_id=107 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000172560_5end | |association_with_transcript=0bp_to_ENSMUST00000172560_5end | ||
|cluster_id=chr3:34095664..34095678,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000172560_5end | |description=CAGE_peak_1_at_ENSMUST00000172560_5end | ||
|id=chr3:34095664..34095678,+ | |id=chr3:34095664..34095678,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.33e-12!33;CL:0000047!1.33e-12!33;CL:0000031!1.33e-12!33;CL:0000404!1.33e-12!33;CL:0000107!1.49e-12!9;CL:0000393!1.35e-09!39;CL:0000211!1.35e-09!39;CL:0002319!4.35e-08!43;CL:0000221!9.29e-08!44;CL:0000133!9.29e-08!44 | |ontology_enrichment_celltype=CL:0000540!1.33e-12!33;CL:0000047!1.33e-12!33;CL:0000031!1.33e-12!33;CL:0000404!1.33e-12!33;CL:0000107!1.49e-12!9;CL:0000393!1.35e-09!39;CL:0000211!1.35e-09!39;CL:0002319!4.35e-08!43;CL:0000221!9.29e-08!44;CL:0000133!9.29e-08!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000107,5.19e-41,9;CL:0000540,2.38e-18,33;CL:0000047,2.38e-18,33;CL:0000031,2.38e-18,33;CL:0000404,2.38e-18,33;CL:0000393,3.16e-15,39;CL:0000211,3.16e-15,39;CL:0002608,4.96e-14,3;CL:0002319,1.25e-13,43;CL:0000221,2.84e-13,44;CL:0000133,2.84e-13,44;CL:0002321,1.33e-07,70;CL:0002609,2.93e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.78e-15!73;UBERON:0005743!2.78e-15!73;UBERON:0000073!1.53e-14!75;UBERON:0001016!1.53e-14!75;UBERON:0003056!4.27e-13!49;UBERON:0002410!1.49e-12!9;UBERON:0004121!5.80e-12!102;UBERON:0000924!5.80e-12!102;UBERON:0006601!5.80e-12!102;UBERON:0002780!7.95e-12!39;UBERON:0001890!7.95e-12!39;UBERON:0006240!7.95e-12!39;UBERON:0002791!2.09e-11!29;UBERON:0003528!2.09e-11!29;UBERON:0001893!2.09e-11!29;UBERON:0003080!2.43e-11!40;UBERON:0002346!4.89e-11!71;UBERON:0003075!4.89e-11!71;UBERON:0007284!4.89e-11!71;UBERON:0000033!1.40e-10!63;UBERON:0000955!3.99e-10!50;UBERON:0006238!3.99e-10!50;UBERON:0002020!9.17e-10!34;UBERON:0000010!9.73e-10!11;UBERON:0000956!2.20e-09!21;UBERON:0001869!2.20e-09!21;UBERON:0000203!2.20e-09!21;UBERON:0002616!2.30e-09!49;UBERON:0001049!1.96e-08!52;UBERON:0005068!1.96e-08!52;UBERON:0006241!1.96e-08!52;UBERON:0007135!1.96e-08!52;UBERON:0002619!5.23e-08!17 | |ontology_enrichment_uberon=UBERON:0001017!2.78e-15!73;UBERON:0005743!2.78e-15!73;UBERON:0000073!1.53e-14!75;UBERON:0001016!1.53e-14!75;UBERON:0003056!4.27e-13!49;UBERON:0002410!1.49e-12!9;UBERON:0004121!5.80e-12!102;UBERON:0000924!5.80e-12!102;UBERON:0006601!5.80e-12!102;UBERON:0002780!7.95e-12!39;UBERON:0001890!7.95e-12!39;UBERON:0006240!7.95e-12!39;UBERON:0002791!2.09e-11!29;UBERON:0003528!2.09e-11!29;UBERON:0001893!2.09e-11!29;UBERON:0003080!2.43e-11!40;UBERON:0002346!4.89e-11!71;UBERON:0003075!4.89e-11!71;UBERON:0007284!4.89e-11!71;UBERON:0000033!1.40e-10!63;UBERON:0000955!3.99e-10!50;UBERON:0006238!3.99e-10!50;UBERON:0002020!9.17e-10!34;UBERON:0000010!9.73e-10!11;UBERON:0000956!2.20e-09!21;UBERON:0001869!2.20e-09!21;UBERON:0000203!2.20e-09!21;UBERON:0002616!2.30e-09!49;UBERON:0001049!1.96e-08!52;UBERON:0005068!1.96e-08!52;UBERON:0006241!1.96e-08!52;UBERON:0007135!1.96e-08!52;UBERON:0002619!5.23e-08!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,5.19e-41,9;UBERON:0000010,2.43e-33,11;UBERON:0000011,3.29e-15,3;UBERON:0000013,1.17e-14,3;UBERON:0010313,2.68e-14,3;UBERON:0002342,2.68e-14,3;UBERON:0002005,2.68e-14,3;UBERON:0005428,2.68e-14,3;UBERON:0005062,2.68e-14,3;UBERON:0001017,1.62e-13,73;UBERON:0001016,4.37e-13,75;UBERON:0004121,8.93e-10,95;UBERON:0000924,8.93e-10,95;UBERON:0006601,8.93e-10,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0.518448061542388,0.270011876663381,0,0,0,5.63457676388789,5.46319184803947,1.83843757322004,0,0.127687338085188,0,0.659431438650969,0.640413505216868,0.52091337055676,0.279182999001381,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39266750704734,0.521472960576829,0.255715457330331,0.62336413367868,0.648965052271031,0,0.124406970610093,0,0,0.130120442962704,0,0,0.150704817835715,0.272145996605311,0.512454881139399,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.92614151141356,0,0,1.06644125267617,0.464473343720877,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,5.36363973007636,2.73307121007647,9.90947629570875,19.5954414321093,21.1658740378274,26.6091938941502,5.66734982344852,7.3063964477828,5.92931666919785,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10717597753397,0.406638934253697,0.540026704109006,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0,2.29158205375759,0.171853182343688,0.685082519770642,0.755393897389701,0,0.45032120322422,0.453142408984205,0,0,0,0.682934423016537,0,0.419226325255965,0,0.222246727801615,0.618105171716683,1.28367683836726,0,0.25347929989024,0.377252682772152,0.37456602987953,0.576226371643824,0.402048282689293,1.42888107384922,0.927074607558844,0.578727661391115,0,0,0.685738504770831,0,0,0.581385666529314,0.658765662907314,0.338458431566706,0.73171189149109,0.789209134313529,0.679020569229309,0,0.593175090620871,0.29551344712669,0,0.464810523557898,0.192906610981141,0.999242311751784,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0.518448061542388,0.270011876663381,0,0,0,5.63457676388789,5.46319184803947,1.83843757322004,0,0.127687338085188,0,0.659431438650969,0.640413505216868,0.52091337055676,0.279182999001381,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39266750704734,0.521472960576829,0.255715457330331,0.62336413367868,0.648965052271031,0,0.124406970610093,0,0,0.130120442962704,0,0,0.150704817835715,0.272145996605311,0.512454881139399,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.92614151141356,0,0,1.06644125267617,0.464473343720877,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,5.36363973007636,2.73307121007647,9.90947629570875,19.5954414321093,21.1658740378274,26.6091938941502,5.66734982344852,7.3063964477828,5.92931666919785,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10717597753397,0.406638934253697,0.540026704109006,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0,2.29158205375759,0.171853182343688,0.685082519770642,0.755393897389701,0,0.45032120322422,0.453142408984205,0,0,0,0.682934423016537,0,0.419226325255965,0,0.222246727801615,0.618105171716683,1.28367683836726,0,0.25347929989024,0.377252682772152,0.37456602987953,0.576226371643824,0.402048282689293,1.42888107384922,0.927074607558844,0.578727661391115,0,0,0.685738504770831,0,0,0.581385666529314,0.658765662907314,0.338458431566706,0.73171189149109,0.789209134313529,0.679020569229309,0,0.593175090620871,0.29551344712669,0,0.464810523557898,0.192906610981141,0.999242311751784,0.233931608445408,0,0,0,0 | ||
|short_description=p1@ENSMUST00000172560 | |short_description=p1@ENSMUST00000172560 | ||
}} | }} |
Latest revision as of 09:43, 6 August 2015
Short description: | p1@ENSMUST00000172560 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000172560_5end |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | 0bp_to_ENSMUST00000172560_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 5.19e-41 | 9 |
neuron | 2.38e-18 | 33 |
neuronal stem cell | 2.38e-18 | 33 |
neuroblast | 2.38e-18 | 33 |
electrically signaling cell | 2.38e-18 | 33 |
electrically responsive cell | 3.16e-15 | 39 |
electrically active cell | 3.16e-15 | 39 |
hippocampal neuron | 4.96e-14 | 3 |
neural cell | 1.25e-13 | 43 |
ectodermal cell | 2.84e-13 | 44 |
neurectodermal cell | 2.84e-13 | 44 |
embryonic cell | 1.33e-07 | 70 |
neuron of cerebral cortex | 2.93e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 5.19e-41 | 9 |
peripheral nervous system | 2.43e-33 | 11 |
parasympathetic nervous system | 3.29e-15 | 3 |
sympathetic nervous system | 1.17e-14 | 3 |
neural crest-derived structure | 2.68e-14 | 3 |
neural crest | 2.68e-14 | 3 |
enteric nervous system | 2.68e-14 | 3 |
vagal neural crest | 2.68e-14 | 3 |
neural fold | 2.68e-14 | 3 |
central nervous system | 1.62e-13 | 73 |
nervous system | 4.37e-13 | 75 |
ectoderm-derived structure | 8.93e-10 | 95 |
ectoderm | 8.93e-10 | 95 |
presumptive ectoderm | 8.93e-10 | 95 |