FFCP PHASE1:Mm9::chr10:115535696..115535704,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |MCL_coexpression_id=58 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:115535696..115535704,- | |||
|description=CAGE_peak_at_chr10:115535696..115535704,- | |description=CAGE_peak_at_chr10:115535696..115535704,- | ||
|id=chr10:115535696..115535704,- | |id=chr10:115535696..115535704,- | ||
|ontology_enrichment_celltype=CL:0000473!2.33e-12!3;CL:0000627!2.33e-12!3;CL:0000682!2.33e-12!3;CL:0000239!9.70e-11!6;CL:0000677!9.70e-11!6;CL:0000212!9.70e-11!6;CL:0000584!9.70e-11!6;CL:0000075!3.24e-09!7;CL:0002563!3.54e-07!9;CL:0002251!3.54e-07!9;CL:0000066!7.12e-07!25 | |ontology_enrichment_celltype=CL:0000473!2.33e-12!3;CL:0000627!2.33e-12!3;CL:0000682!2.33e-12!3;CL:0000239!9.70e-11!6;CL:0000677!9.70e-11!6;CL:0000212!9.70e-11!6;CL:0000584!9.70e-11!6;CL:0000075!3.24e-09!7;CL:0002563!3.54e-07!9;CL:0002251!3.54e-07!9;CL:0000066!7.12e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.03e-19,6;CL:0000677,1.03e-19,6;CL:0000584,1.03e-19,6;CL:0000075,5.95e-17,7;CL:0002563,2.90e-13,9;CL:0002251,2.90e-13,9;CL:0000682,6.48e-11,3;CL:0000066,2.27e-10,25;CL:0002076,4.54e-08,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.52e-20!15;UBERON:0001242!5.55e-14!13;UBERON:0000060!5.55e-14!13;UBERON:0001262!5.55e-14!13;UBERON:0004786!5.55e-14!13;UBERON:0004923!6.03e-12!24;UBERON:0000945!1.52e-10!16;UBERON:0010039!1.52e-10!16;UBERON:0005409!4.56e-10!59;UBERON:0001962!4.01e-09!2;UBERON:0001961!4.01e-09!2;UBERON:0001744!4.01e-09!2;UBERON:0001007!3.01e-07!128;UBERON:0001555!3.01e-07!128;UBERON:0007026!3.01e-07!128;UBERON:0003350!3.54e-07!9;UBERON:0004808!3.54e-07!9;UBERON:0001277!3.54e-07!9;UBERON:0004119!4.42e-07!130;UBERON:0000925!4.42e-07!130;UBERON:0006595!4.42e-07!130 | |ontology_enrichment_uberon=UBERON:0000344!5.52e-20!15;UBERON:0001242!5.55e-14!13;UBERON:0000060!5.55e-14!13;UBERON:0001262!5.55e-14!13;UBERON:0004786!5.55e-14!13;UBERON:0004923!6.03e-12!24;UBERON:0000945!1.52e-10!16;UBERON:0010039!1.52e-10!16;UBERON:0005409!4.56e-10!59;UBERON:0001962!4.01e-09!2;UBERON:0001961!4.01e-09!2;UBERON:0001744!4.01e-09!2;UBERON:0001007!3.01e-07!128;UBERON:0001555!3.01e-07!128;UBERON:0007026!3.01e-07!128;UBERON:0003350!3.54e-07!9;UBERON:0004808!3.54e-07!9;UBERON:0001277!3.54e-07!9;UBERON:0004119!4.42e-07!130;UBERON:0000925!4.42e-07!130;UBERON:0006595!4.42e-07!130 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,7.45e-31,15;UBERON:0001242,4.15e-20,13;UBERON:0001262,4.15e-20,13;UBERON:0004786,4.15e-20,13;UBERON:0004923,4.12e-19,24;UBERON:0001962,4.86e-16,2;UBERON:0001961,4.86e-16,2;UBERON:0001744,4.86e-16,2;UBERON:0003350,2.90e-13,9;UBERON:0004808,2.90e-13,9;UBERON:0001277,2.90e-13,9;UBERON:0002465,5.17e-11,3;UBERON:0000485,6.58e-11,11;UBERON:0005409,2.53e-09,47;UBERON:0003199,8.81e-09,1;UBERON:0000160,2.59e-08,31 | |||
|phase1_expression=0,2.79180326111489,5.45999087267443,0,0,1.6787927191189,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.31979541542198,3.89995777814189,0.57423196411502,5.1691439539089,2.58565479223067,0,0.252030129759931,2.88249663851896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29544417878937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0.655087691238533,1.75323650300267,0.330613822901344,2.35580347785627,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,2.79180326111489,5.45999087267443,0,0,1.6787927191189,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.31979541542198,3.89995777814189,0.57423196411502,5.1691439539089,2.58565479223067,0,0.252030129759931,2.88249663851896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29544417878937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0.655087691238533,1.75323650300267,0.330613822901344,2.35580347785627,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:115535696..115535704,- | |short_description=p@chr10:115535696..115535704,- | ||
}} | }} |
Latest revision as of 21:45, 3 August 2015
Short description: | p@chr10:115535696..115535704, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:115535696..115535704, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.03e-19 | 6 |
gut absorptive cell | 1.03e-19 | 6 |
enterocyte | 1.03e-19 | 6 |
columnar/cuboidal epithelial cell | 5.95e-17 | 7 |
intestinal epithelial cell | 2.90e-13 | 9 |
epithelial cell of alimentary canal | 2.90e-13 | 9 |
M cell of gut | 6.48e-11 | 3 |
epithelial cell | 2.27e-10 | 25 |
endo-epithelial cell | 4.54e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 7.45e-31 | 15 |
intestinal mucosa | 4.15e-20 | 13 |
wall of intestine | 4.15e-20 | 13 |
gastrointestinal system mucosa | 4.15e-20 | 13 |
organ component layer | 4.12e-19 | 24 |
gut-associated lymphoid tissue | 4.86e-16 | 2 |
mucosa-associated lymphoid tissue | 4.86e-16 | 2 |
lymphoid tissue | 4.86e-16 | 2 |
epithelium of mucosa | 2.90e-13 | 9 |
gastrointestinal system epithelium | 2.90e-13 | 9 |
intestinal epithelium | 2.90e-13 | 9 |
lymphoid system | 5.17e-11 | 3 |
simple columnar epithelium | 6.58e-11 | 11 |
gastrointestinal system | 2.53e-09 | 47 |
egg chamber | 8.81e-09 | 1 |
intestine | 2.59e-08 | 31 |