FFCP PHASE1:Mm9::chr12:115379333..115379344,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=63 | |MCL_coexpression_id=63 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000103473_5end | |association_with_transcript=0bp_to_ENSMUST00000103473_5end | ||
|cluster_id=chr12:115379333..115379344,- | |||
|description=CAGE_peak_1_at_ENSMUST00000103473_5end | |description=CAGE_peak_1_at_ENSMUST00000103473_5end | ||
|id=chr12:115379333..115379344,- | |id=chr12:115379333..115379344,- | ||
|ontology_enrichment_celltype=CL:0000553!5.46e-16!6;CL:0000556!5.46e-16!6;CL:0000050!2.20e-10!9;CL:0002027!1.21e-08!3;CL:0002006!1.21e-08!3;CL:0002024!1.21e-08!3;CL:0000414!2.41e-08!11;CL:0000839!6.22e-07!13 | |ontology_enrichment_celltype=CL:0000553!5.46e-16!6;CL:0000556!5.46e-16!6;CL:0000050!2.20e-10!9;CL:0002027!1.21e-08!3;CL:0002006!1.21e-08!3;CL:0002024!1.21e-08!3;CL:0000414!2.41e-08!11;CL:0000839!6.22e-07!13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.70e-33,6;CL:0000556,1.70e-33,6;CL:0000050,2.07e-22,9;CL:0000839,1.46e-15,13;CL:0000763,1.16e-12,16;CL:0002027,1.37e-11,3;CL:0002006,1.37e-11,3;CL:0002024,1.37e-11,3;CL:0002031,2.12e-11,25;CL:0000049,1.13e-10,19;CL:0000945,3.65e-09,1;CL:0000236,3.65e-09,1;CL:0000826,3.65e-09,1;CL:0000988,7.28e-09,32;CL:0002032,7.28e-09,32;CL:0000037,7.28e-09,32;CL:0000837,7.28e-09,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.37e-10!48;UBERON:0002465!1.44e-08!3;UBERON:0007023!1.44e-07!51;UBERON:0002106!6.46e-07!6;UBERON:0004457!6.46e-07!6;UBERON:0000042!6.46e-07!6;UBERON:0004854!6.46e-07!6;UBERON:0009034!6.46e-07!6;UBERON:0002095!6.46e-07!6;UBERON:0004782!6.46e-07!6;UBERON:0003281!6.46e-07!6;UBERON:0009664!6.46e-07!6;UBERON:0002296!6.46e-07!6;UBERON:0005602!6.46e-07!6;UBERON:0001179!6.46e-07!6;UBERON:0006293!6.46e-07!6;UBERON:0002390!8.53e-07!45;UBERON:0003061!8.53e-07!45;UBERON:0004923!9.65e-07!24 | |ontology_enrichment_uberon=UBERON:0002193!4.37e-10!48;UBERON:0002465!1.44e-08!3;UBERON:0007023!1.44e-07!51;UBERON:0002106!6.46e-07!6;UBERON:0004457!6.46e-07!6;UBERON:0000042!6.46e-07!6;UBERON:0004854!6.46e-07!6;UBERON:0009034!6.46e-07!6;UBERON:0002095!6.46e-07!6;UBERON:0004782!6.46e-07!6;UBERON:0003281!6.46e-07!6;UBERON:0009664!6.46e-07!6;UBERON:0002296!6.46e-07!6;UBERON:0005602!6.46e-07!6;UBERON:0001179!6.46e-07!6;UBERON:0006293!6.46e-07!6;UBERON:0002390!8.53e-07!45;UBERON:0003061!8.53e-07!45;UBERON:0004923!9.65e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,5.35e-13,22;UBERON:0004765,5.35e-13,22;UBERON:0001434,5.35e-13,22;UBERON:0002371,1.16e-12,16;UBERON:0002193,2.74e-10,48;UBERON:0002405,2.74e-10,48;UBERON:0000029,9.82e-10,1;UBERON:0001097,9.82e-10,1;UBERON:0003968,9.82e-10,1;UBERON:0001467,9.82e-10,1;UBERON:0001044,6.33e-09,1;UBERON:0001736,6.33e-09,1;UBERON:0003293,6.33e-09,1;UBERON:0003294,6.33e-09,1;UBERON:0001829,6.33e-09,1;UBERON:0010047,6.33e-09,1;UBERON:0000167,6.33e-09,1;UBERON:0006298,6.33e-09,1;UBERON:0002204,7.04e-09,32;UBERON:0002390,2.11e-08,45;UBERON:0003061,2.11e-08,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66554880907831,4.25198061518635,0.699561878128147,4.73193248037357,3.29074640653773,2.97072756258621,0,0.0992909512008853,0,0.95995453676044,0.45881856213434,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51673909086605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,12.1700805314171,0,0,0,0,0,0,0,0,0.289198713839823,2.65383165584962,0,0.220841518460394,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0.690739927463582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,7.51831875510552,0,0,0.188368457004691,0.410082683163076,1.60144721244566,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66554880907831,4.25198061518635,0.699561878128147,4.73193248037357,3.29074640653773,2.97072756258621,0,0.0992909512008853,0,0.95995453676044,0.45881856213434,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51673909086605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,12.1700805314171,0,0,0,0,0,0,0,0,0.289198713839823,2.65383165584962,0,0.220841518460394,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0.690739927463582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,7.51831875510552,0,0,0.188368457004691,0.410082683163076,1.60144721244566,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENSMUST00000103473 | |short_description=p1@ENSMUST00000103473 | ||
}} | }} |
Latest revision as of 20:10, 4 August 2015
Short description: | p1@ENSMUST00000103473 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000103473_5end |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | 0bp_to_ENSMUST00000103473_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.70e-33 | 6 |
megakaryocyte | 1.70e-33 | 6 |
megakaryocyte-erythroid progenitor cell | 2.07e-22 | 9 |
myeloid lineage restricted progenitor cell | 1.46e-15 | 13 |
myeloid cell | 1.16e-12 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 1.37e-11 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.37e-11 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.37e-11 | 3 |
hematopoietic lineage restricted progenitor cell | 2.12e-11 | 25 |
common myeloid progenitor | 1.13e-10 | 19 |
lymphocyte of B lineage | 3.65e-09 | 1 |
B cell | 3.65e-09 | 1 |
pro-B cell | 3.65e-09 | 1 |
hematopoietic cell | 7.28e-09 | 32 |
hematopoietic oligopotent progenitor cell | 7.28e-09 | 32 |
hematopoietic stem cell | 7.28e-09 | 32 |
hematopoietic multipotent progenitor cell | 7.28e-09 | 32 |
Ontology term | p-value | n |
---|---|---|
bone element | 5.35e-13 | 22 |
skeletal element | 5.35e-13 | 22 |
skeletal system | 5.35e-13 | 22 |
bone marrow | 1.16e-12 | 16 |
hemolymphoid system | 2.74e-10 | 48 |
immune system | 2.74e-10 | 48 |
lymph node | 9.82e-10 | 1 |
axillary lymph node | 9.82e-10 | 1 |
peripheral lymph node | 9.82e-10 | 1 |
shoulder | 9.82e-10 | 1 |
saliva-secreting gland | 6.33e-09 | 1 |
submandibular gland | 6.33e-09 | 1 |
gland of oral region | 6.33e-09 | 1 |
gland of foregut | 6.33e-09 | 1 |
major salivary gland | 6.33e-09 | 1 |
oral gland | 6.33e-09 | 1 |
oral cavity | 6.33e-09 | 1 |
submandibular gland primordium | 6.33e-09 | 1 |
musculoskeletal system | 7.04e-09 | 32 |
hematopoietic system | 2.11e-08 | 45 |
blood island | 2.11e-08 | 45 |