FFCP PHASE1:Hg19::chr2:220142973..220142983,-: Difference between revisions
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|id=chr2:220142973..220142983,-
|short_description=p26@TUBA4A
|description=CAGE_peak_26_at_TUBA4A_5end
|association_with_transcript=-81bp_to_ENST00000427737_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7277 | |EntrezGene=7277 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12407 | |HGNC=12407 | ||
|TSSclassifier=strong | |||
|UniProt=C9JQ00 | |UniProt=C9JQ00 | ||
|association_with_transcript=-81bp_to_ENST00000427737_5end | |||
|cluster_id=chr2:220142973..220142983,- | |||
|coexpression_cluster_id=C682 | |||
|description=CAGE_peak_26_at_TUBA4A_5end | |||
|id=chr2:220142973..220142983,- | |||
|ontology_enrichment_celltype=CL:0000945!6.06e-84!24;CL:0000826!6.06e-84!24;CL:0000236!3.52e-49!14;CL:0000542!7.12e-40!53;CL:0000051!7.12e-40!53;CL:0000838!1.49e-36!52;CL:0002087!6.91e-21!119;CL:0002031!6.26e-18!124;CL:0000738!4.75e-17!140;CL:0002032!9.51e-14!165;CL:0000837!9.51e-14!165;CL:0000037!5.38e-13!172;CL:0000566!5.38e-13!172;CL:0000785!2.88e-12!2;CL:0000955!2.88e-12!2;CL:0000818!2.88e-12!2;CL:0000954!2.88e-12!2;CL:0000816!2.88e-12!2;CL:0000988!5.08e-12!182;CL:0000817!1.81e-08!3;CL:0000819!5.14e-07!1;CL:0000946!6.49e-07!1;CL:0000786!6.49e-07!1;CL:0000980!6.49e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000945;8.91e-68;24!CL:0000236;1.90e-61;13!CL:0000542;1.35e-25;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.86e-68,24;CL:0000826,5.86e-68,24;CL:0000236,2.85e-57,14;CL:0000838,4.38e-31,52;CL:0000542,1.73e-30,53;CL:0000051,1.73e-30,53;CL:0002087,1.89e-16,115;CL:0002031,9.79e-16,120;CL:0000738,8.47e-14,136;CL:0002032,1.57e-11,161;CL:0000837,1.57e-11,161;CL:0000037,5.14e-11,168;CL:0000988,2.07e-10,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.35e-25;53 | |||
|ontology_enrichment_disease=DOID:0060058!1.07e-14!10;DOID:630!3.01e-07!1;DOID:0050177!3.01e-07!1;DOID:0050427!3.01e-07!1;DOID:12603!3.60e-07!1;DOID:0060073!5.14e-07!1;DOID:8675!5.14e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.11e-15;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.11e-15,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!3.54e-17!3;UBERON:0004854!3.54e-17!3;UBERON:0009034!3.54e-17!3;UBERON:0002095!3.54e-17!3;UBERON:0004782!3.54e-17!3;UBERON:0003281!3.54e-17!3;UBERON:0009664!3.54e-17!3;UBERON:0002296!3.54e-17!3;UBERON:0005602!3.54e-17!3;UBERON:0001179!3.54e-17!3;UBERON:0006293!3.54e-17!3;UBERON:0004177!1.18e-07!7;UBERON:0002372!3.82e-07!1;UBERON:0001961!3.82e-07!1;UBERON:0001744!3.82e-07!1;UBERON:0001735!3.82e-07!1;UBERON:0001154!4.31e-07!1;UBERON:0001153!4.31e-07!1;UBERON:0000029!4.57e-07!1;UBERON:0000945!9.39e-07!8;UBERON:0010039!9.39e-07!8 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p26@TUBA4A | |||
}} | }} |
Latest revision as of 20:10, 24 September 2015
Short description: | p26@TUBA4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_TUBA4A_5end |
Coexpression cluster: | C682_Burkitt_lymphoma_CD19_appendix_tonsil_spleen_diffuse |
Association with transcript: | -81bp_to_ENST00000427737_5end |
EntrezGene: | TUBA4A |
HGNC: | 12407 |
UniProt: | C9JQ00 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.86e-68 | 24 |
pro-B cell | 5.86e-68 | 24 |
B cell | 2.85e-57 | 14 |
lymphoid lineage restricted progenitor cell | 4.38e-31 | 52 |
lymphocyte | 1.73e-30 | 53 |
common lymphoid progenitor | 1.73e-30 | 53 |
nongranular leukocyte | 1.89e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 9.79e-16 | 120 |
leukocyte | 8.47e-14 | 136 |
hematopoietic oligopotent progenitor cell | 1.57e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.57e-11 | 161 |
hematopoietic stem cell | 5.14e-11 | 168 |
hematopoietic cell | 2.07e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.11e-15 | 10 |