FFCP PHASE1:Mm9::chr7:16535437..16535441,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=188 | |MCL_coexpression_id=188 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:16535437..16535441,- | |||
|description=CAGE_peak_at_chr7:16535437..16535441,- | |description=CAGE_peak_at_chr7:16535437..16535441,- | ||
|id=chr7:16535437..16535441,- | |id=chr7:16535437..16535441,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.17e-08,6;CL:0000187,3.17e-08,6;CL:0000056,3.17e-08,6;CL:0000222,5.82e-07,7;CL:0002494,6.19e-07,3;CL:0000737,6.19e-07,3;CL:0000746,6.19e-07,3;CL:0000513,6.19e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!2.81e-09!17;UBERON:0005181!2.81e-09!17;UBERON:0002224!2.81e-09!17;UBERON:0000915!2.81e-09!17;UBERON:0008947!2.81e-09!17;UBERON:0003258!2.81e-09!17;UBERON:0002048!7.43e-08!14;UBERON:0000117!7.43e-08!14;UBERON:0000171!7.43e-08!14;UBERON:0000170!7.43e-08!14;UBERON:0005597!7.43e-08!14;UBERON:0000118!7.43e-08!14;UBERON:0005153!4.41e-07!17 | |ontology_enrichment_uberon=UBERON:0005178!2.81e-09!17;UBERON:0005181!2.81e-09!17;UBERON:0002224!2.81e-09!17;UBERON:0000915!2.81e-09!17;UBERON:0008947!2.81e-09!17;UBERON:0003258!2.81e-09!17;UBERON:0002048!7.43e-08!14;UBERON:0000117!7.43e-08!14;UBERON:0000171!7.43e-08!14;UBERON:0000170!7.43e-08!14;UBERON:0005597!7.43e-08!14;UBERON:0000118!7.43e-08!14;UBERON:0005153!4.41e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,8.48e-19,17;UBERON:0005181,8.48e-19,17;UBERON:0002224,8.48e-19,17;UBERON:0000915,8.48e-19,17;UBERON:0008947,8.48e-19,17;UBERON:0003258,8.48e-19,17;UBERON:0002048,2.83e-15,14;UBERON:0000117,2.83e-15,14;UBERON:0000171,2.83e-15,14;UBERON:0000170,2.83e-15,14;UBERON:0005597,2.83e-15,14;UBERON:0000118,2.83e-15,14;UBERON:0005153,4.55e-12,17;UBERON:0005157,7.80e-10,20 | |||
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| |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274228867211478,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14024590558481,0.709638518536602,1.46837401729345,5.47673941043627,0.218025156380447,0.878744730937887,1.1665793944457,1.81982348112971,0,0,0.725362142011344,0,9.00408026125814,5.15760191889762,2.06268836910977,0,0,0,2.03306719241479,0.889294796111139,2.2497492932035,1.97773272513395,1.4209602298922,2.09720077362883,0,0.103689612308478,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0,0.151452386666368,0.226714680320357,0.289864488701678,0,0,0,0,0,0.280888840263504,5.62420064507591,7.53379413348319,3.5333957451034,0,0,0,0,1.5154372870785,1.01343946190039,1.01104889002957,0.11418387971906,0.258937883647172,0.29688427812965,0.520455980298408,0,1.15307748628029,0.301445281105245,0.352766121407114,0.251333182659351,0.741584903203122,0.722996784599558,0,0.647067399789637,0.441683036920787,1.93950101254089,0,0.292780797011547,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,1.01839363850316,0.746441823660558,0.252722758433675,0,0.260240885925407,0.229902104433473,0.180062129805349,0.30140963567143,0.204109497453984,0.12811372028485,0.374806898238915,1.03481348295606,0.215567992932842,0,0,0.43839146485515,1.11218899690239,1.74126083261083,1.23469281844766,0.398068533636986,0,0,0,0,0.234526059981096,0.36012412292203,0,0.196764231747404,1.23413690309903,1.39520366850245,0.804820204198858,1.28441876603886,1.6455984991348,1.64167464079095,0.56748166682099,0.438599962275997,0.878200461164203,0.671032093801859,0,0,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0.403367049246685,0.22237804384487,0,0.949058123089023,0.658795818896044,0.754005626400808,0,0.779856348476481,0.898819408654221,0.648414149624083,0,0,0.571242563048644,0,0.407302655690628,0.387904974335251,0.210407459670956,0.316182685621286,0.590440591918409,0.470996183524124,0.123397163921801,0,0,0,0,0,0,0,0,0,0,4.31304619582064,0.372140947668503,0,0,0,0,1.66277871149944,0.568474235311454,0.162964976442026,1.18821560042632,1.17345124144251,1.34005005953453,1.19021820443007,1.56106918286239,1.7339865851681,1.10732344824387,1.75400245523236,2.94953966488328,2.76295970985433,1.3018415272336,0,0,0.983528546038072,0.275936746304732,0,0,0.327869890753351,1.00988370881749,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0.584511715822624,0.395287777946524,0,0.425820255624806,0.712262414669021,0.488660878060728,0.329940245945071,0,0,0.604647113929502,0.188605079755898,0.295301892880773,0.614870295887855,0,0.727067458955011,0.712994756769443,0,0,1.03135543248187,0,0,0.129358683782755,0,0,0.178368817602071,0.493647061806363,0.304464949114599,0.469343416127421,0.21183207086382,0,0,0.968786560175433,0.603129249281559,0.596861720015682,0.820704498725306,0.291480836629851,0,0,0.412773735926445,0,0,0.410082683163076,0.228778173206523,0,0,0,0,0.158167996790568,0.609958401380546,0.540026704109006,1.25452977608681,0.87345025498471,1.61837215661785,0.41326727862668,0,0.259229946583586,0,0,0,0.165458490457098,0.194451188344048,0.387479470433193,0.337912250981556,0.469428954583016,0.5208175393758,0.314578033277133,0,0,0,0.202725215290164,0.308132871494482,0.25984164595559,0,0,0.240390899039938,0.295379054349154,0,0,0.201652370273681,0,0.0962118416403295,0,0.226730383615211,0,0.179427713218951,0,0.386379188064381,1.31377732815827,0.549454872801795,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0.341467211508268,0.486213434136588,0.628839487883947,0.551530525350042,0.44449345560323,0.824140228955577,0.320919209591815,0.505394423527595,0.50695859978048,0.377252682772152,0.561849044819294,0.832326981263301,0.34461281373368,0.952587382566147,0.347652977834566,0.38581844092741,0.824171801606613,1.17759136107518,1.71434626192708,1.24233064311536,1.1921809497366,0.726732083161643,0.564656282491984,0.338458431566706,0.365855945745545,0.789209134313529,0.407412341537585,1.68342681497322,0.711810108745045,0.886540341380071,0.818462086339379,0.464810523557898,0.192906610981141,0.749431733813838,0.467863216890817,0.214871054048298,0.765153328275374,0.441182838239031,0.463735671240843 | ||
|short_description=p@chr7:16535437..16535441,- | |short_description=p@chr7:16535437..16535441,- | ||
}} | }} |
Latest revision as of 15:56, 4 August 2015
Short description: | p@chr7:16535437..16535441, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:16535437..16535441, - |
Coexpression cluster: | MCL_coexpression_mm9:188 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.17e-08 | 6 |
muscle cell | 3.17e-08 | 6 |
myoblast | 3.17e-08 | 6 |
mesodermal cell | 5.82e-07 | 7 |
cardiocyte | 6.19e-07 | 3 |
striated muscle cell | 6.19e-07 | 3 |
cardiac muscle cell | 6.19e-07 | 3 |
cardiac muscle myoblast | 6.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 8.48e-19 | 17 |
thoracic segment organ | 8.48e-19 | 17 |
thoracic cavity | 8.48e-19 | 17 |
thoracic segment of trunk | 8.48e-19 | 17 |
respiratory primordium | 8.48e-19 | 17 |
endoderm of foregut | 8.48e-19 | 17 |
lung | 2.83e-15 | 14 |
respiratory tube | 2.83e-15 | 14 |
respiration organ | 2.83e-15 | 14 |
pair of lungs | 2.83e-15 | 14 |
lung primordium | 2.83e-15 | 14 |
lung bud | 2.83e-15 | 14 |
epithelial bud | 4.55e-12 | 17 |
epithelial fold | 7.80e-10 | 20 |