FFCP PHASE1:Hg19::chr2:240220167..240220189,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:240220167..240220189,-
|short_description=p11@HDAC4
|description=CAGE_peak_11_at_HDAC4_5end
|association_with_transcript=35bp_to_ENST00000535493_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9759 | |EntrezGene=9759 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14063 | |HGNC=14063 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=35bp_to_ENST00000535493_5end | |||
|cluster_id=chr2:240220167..240220189,- | |||
|coexpression_cluster_id=C1121 | |||
|description=CAGE_peak_11_at_HDAC4_5end | |||
|id=chr2:240220167..240220189,- | |||
|ontology_enrichment_celltype=CL:0000084!1.22e-44!25;CL:0000827!1.22e-44!25;CL:0000791!1.16e-36!18;CL:0000789!1.16e-36!18;CL:0002420!1.16e-36!18;CL:0002419!1.16e-36!18;CL:0000790!1.16e-36!18;CL:0000838!6.84e-27!52;CL:0000542!3.01e-26!53;CL:0000051!3.01e-26!53;CL:0000738!3.48e-24!140;CL:0002087!5.61e-21!119;CL:0000625!3.85e-19!11;CL:0000037!1.34e-17!172;CL:0000566!1.34e-17!172;CL:0000988!4.99e-17!182;CL:0000624!5.15e-17!6;CL:0002031!9.56e-16!124;CL:0002032!2.92e-13!165;CL:0000837!2.92e-13!165;CL:0000842!2.21e-09!3;CL:0000623!3.42e-09!3;CL:0000825!3.42e-09!3;CL:0000898!7.11e-09!3;CL:0000767!1.09e-08!3;CL:0000080!1.29e-07!6;CL:0000224!4.12e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000084;4.70e-43;25!CL:0000791;6.17e-43;18!CL:0000789;6.17e-43;18!CL:0002419;6.17e-43;18!CL:0000624;3.55e-28;6!CL:0000226;1.71e-20;3!CL:0000842;1.71e-20;3!CL:0000625;5.15e-15;11!CL:0000815;5.27e-14;2!CL:0000792;5.27e-14;2!CL:0002677;5.27e-14;2!CL:0000542;6.80e-14;53!CL:0000623;6.86e-10;3!CL:0000898;1.22e-09;3!CL:0002127;7.59e-08;1!CL:0000911;7.59e-08;1!CL:0000814;7.59e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,3.97e-43,25;CL:0000827,3.97e-43,25;CL:0000791,5.05e-43,18;CL:0000789,5.05e-43,18;CL:0002420,5.05e-43,18;CL:0002419,5.05e-43,18;CL:0000790,5.05e-43,18;CL:0000624,3.27e-28,6;CL:0000838,4.00e-26,52;CL:0000542,1.42e-25,53;CL:0000051,1.42e-25,53;CL:0000226,1.71e-20,3;CL:0000842,1.71e-20,3;CL:0000738,1.68e-17,136;CL:0002087,4.56e-17,115;CL:0000625,5.55e-15,11;CL:0000815,4.94e-14,2;CL:0000792,4.94e-14,2;CL:0002677,4.94e-14,2;CL:0000037,2.10e-13,168;CL:0000988,1.62e-12,177;CL:0002031,5.06e-11,120;CL:0000623,9.81e-10,3;CL:0000825,9.81e-10,3;CL:0000898,1.17e-09,3;CL:0002032,1.40e-08,161;CL:0000837,1.40e-08,161;CL:0002127,5.05e-08,1;CL:0000914,5.05e-08,1;CL:0000911,5.05e-08,1;CL:0000814,5.05e-08,1;CL:0002042,5.05e-08,1;CL:0002039,5.05e-08,1;CL:0002040,5.05e-08,1;CL:0002041,5.05e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000790;6.17e-43;18!CL:0000051;6.80e-14;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.07e-11!4;UBERON:0005058!1.07e-11!4;UBERON:0009113!1.07e-11!4;UBERON:0003295!1.07e-11!4;UBERON:0005562!1.07e-11!4;UBERON:0004177!7.87e-10!7;UBERON:0000178!5.73e-08!15;UBERON:0000179!5.73e-08!15;UBERON:0000463!5.73e-08!15;UBERON:0003351!8.97e-08!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.20e-14;2!UBERON:0005058;2.20e-14;2!UBERON:0009113;2.20e-14;2!UBERON:0000178;3.21e-07;15!UBERON:0000179;3.21e-07;15!UBERON:0000463;3.21e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.94e-16,4;UBERON:0005058,7.94e-16,4;UBERON:0009113,7.94e-16,4;UBERON:0003295,7.94e-16,4;UBERON:0005562,7.94e-16,4;UBERON:0003351,9.97e-11,6;UBERON:0004177,2.90e-09,7;UBERON:0005057,2.90e-09,7;UBERON:0000178,3.44e-07,15;UBERON:0000179,3.44e-07,15;UBERON:0000463,3.44e-07,15 | |||
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| ||
|short_description=p11@HDAC4 | |||
}} | }} |
Latest revision as of 06:46, 16 September 2015
Short description: | p11@HDAC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_HDAC4_5end |
Coexpression cluster: | C1121_Hodgkin_CD4_acute_CD8_thymus_Natural_chronic |
Association with transcript: | 35bp_to_ENST00000535493_5end |
EntrezGene: | HDAC4 |
HGNC: | 14063 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 7.94e-16 | 4 |
hemolymphoid system gland | 7.94e-16 | 4 |
thymic region | 7.94e-16 | 4 |
pharyngeal gland | 7.94e-16 | 4 |
thymus primordium | 7.94e-16 | 4 |
pharyngeal epithelium | 9.97e-11 | 6 |
hemopoietic organ | 2.90e-09 | 7 |
immune organ | 2.90e-09 | 7 |
blood | 3.44e-07 | 15 |
haemolymphatic fluid | 3.44e-07 | 15 |
organism substance | 3.44e-07 | 15 |