FFCP PHASE1:Mm9::chr11:61870736..61870740,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=127 | |MCL_coexpression_id=127 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:61870736..61870740,+ | |||
|description=CAGE_peak_at_chr11:61870736..61870740,+ | |description=CAGE_peak_at_chr11:61870736..61870740,+ | ||
|id=chr11:61870736..61870740,+ | |id=chr11:61870736..61870740,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002027,3.27e-11,3;CL:0002006,3.27e-11,3;CL:0002024,3.27e-11,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.58e-15,6;UBERON:0004457,2.58e-15,6;UBERON:0000042,2.58e-15,6;UBERON:0004854,2.58e-15,6;UBERON:0009034,2.58e-15,6;UBERON:0002095,2.58e-15,6;UBERON:0004782,2.58e-15,6;UBERON:0003281,2.58e-15,6;UBERON:0009664,2.58e-15,6;UBERON:0002296,2.58e-15,6;UBERON:0005602,2.58e-15,6;UBERON:0001179,2.58e-15,6;UBERON:0006293,2.58e-15,6;UBERON:0005172,1.73e-13,49;UBERON:0005173,1.73e-13,49;UBERON:0002417,1.73e-13,49;UBERON:0000916,1.73e-13,49;UBERON:0003887,1.11e-12,10;UBERON:0002107,1.62e-11,22;UBERON:0007499,1.62e-11,22;UBERON:0006925,1.62e-11,22;UBERON:0009497,1.62e-11,22;UBERON:0000015,1.62e-11,22;UBERON:0002423,1.62e-11,22;UBERON:0006235,1.62e-11,22;UBERON:0008835,1.62e-11,22;UBERON:0003894,1.62e-11,22;UBERON:0004161,1.62e-11,22;UBERON:0008836,1.62e-11,22;UBERON:0009854,5.93e-11,23;UBERON:0009856,5.93e-11,23;UBERON:0002365,5.84e-10,25;UBERON:0002330,5.84e-10,25;UBERON:0009569,2.98e-09,66;UBERON:0005177,2.32e-08,79;UBERON:0002100,5.88e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,3.03712901084739,4.19737126876888,0,0,0,0.255129870453209,0.496454756004426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,1.17646297606203,0,0,0.251793635951155,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.510749352340751,0.307213066512487,0,0,0,0,1.12552522006336,0.45839474333043,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.346970653532272,0,0.461230994512117,0,0.23517741427141,0,0,0.144599356919912,1.76922110389975,0.485300549842228,2.42925670306433,0.484875253135222,0,2.34224637609238,2.72280718857492,0,0,0,0.254140454146129,0.599162557619291,0.457500602818626,0,0.173824320192276,0.255715457330331,0.20778804455956,0.324482526135515,0.101839363850316,2.11491850037158,0,0,0.130120442962704,0,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0.32833492815819,0.405344047729279,0,0,0,0.210289948564127,0,0,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0.295220295959204,0,0,0,1.16791574001266,0.982794975566015,4.04751802292737,1.82574109249653,3.61765739628625,2.29163266603278,1.72617682470486,5.0261920300261,1.64736847912849,5.75072826109418,0.744281895337007,0.936113019343682,0,0,0,0.369506380333209,0,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0,0,0.788175720530955,0.221464689648775,0.478364305972461,0.983179888294428,0.518054945597687,0.578596234326046,0,0,0.491764273019036,0,0.160550589987792,0,0,0.504941854408746,0.94652465824877,0,0.646270193198397,0,0,0,0,0.292255857911312,0.395287777946524,0.321321316421807,0.141940085208269,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,1.05418608574999,0,0,0.18006109403131,0.129358683782755,0,0,0.178368817602071,0,0,0,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,0.18542530201051,3.41741761595705,0.619160603889667,1.29636169158798,11.3021074202815,6.69801715833023,7.54967971581525,0,0,0,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0.299033092087958,0,0,0,0.168956125490778,0,0,0.104859344425711,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.515559547031063,0,0.755393897389701,0.675022500231806,0.900642406448441,0.453142408984205,0,0,0.798049746802062,0.170733605754134,0.972426868273176,0,0,0.666740183404846,0,0,0.505394423527595,0.760437899670719,0,0.280924522409647,0.0640251524048693,0.287177344778066,0,0.231768651889711,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0.532427418478012,0.715308569841963,1.0174249164263,0.188218760830661,0.761531471025089,0.365855945745545,0.526139422875686,0.407412341537585,0.561142271657738,0.118635018124174,0,0,0.619747364743864,0,0,0,0,0,0.882365676478062,0.927471342481686 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,3.03712901084739,4.19737126876888,0,0,0,0.255129870453209,0.496454756004426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,1.17646297606203,0,0,0.251793635951155,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.510749352340751,0.307213066512487,0,0,0,0,1.12552522006336,0.45839474333043,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.346970653532272,0,0.461230994512117,0,0.23517741427141,0,0,0.144599356919912,1.76922110389975,0.485300549842228,2.42925670306433,0.484875253135222,0,2.34224637609238,2.72280718857492,0,0,0,0.254140454146129,0.599162557619291,0.457500602818626,0,0.173824320192276,0.255715457330331,0.20778804455956,0.324482526135515,0.101839363850316,2.11491850037158,0,0,0.130120442962704,0,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0.32833492815819,0.405344047729279,0,0,0,0.210289948564127,0,0,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0.295220295959204,0,0,0,1.16791574001266,0.982794975566015,4.04751802292737,1.82574109249653,3.61765739628625,2.29163266603278,1.72617682470486,5.0261920300261,1.64736847912849,5.75072826109418,0.744281895337007,0.936113019343682,0,0,0,0.369506380333209,0,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0,0,0.788175720530955,0.221464689648775,0.478364305972461,0.983179888294428,0.518054945597687,0.578596234326046,0,0,0.491764273019036,0,0.160550589987792,0,0,0.504941854408746,0.94652465824877,0,0.646270193198397,0,0,0,0,0.292255857911312,0.395287777946524,0.321321316421807,0.141940085208269,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,1.05418608574999,0,0,0.18006109403131,0.129358683782755,0,0,0.178368817602071,0,0,0,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,0.18542530201051,3.41741761595705,0.619160603889667,1.29636169158798,11.3021074202815,6.69801715833023,7.54967971581525,0,0,0,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0.299033092087958,0,0,0,0.168956125490778,0,0,0.104859344425711,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.515559547031063,0,0.755393897389701,0.675022500231806,0.900642406448441,0.453142408984205,0,0,0.798049746802062,0.170733605754134,0.972426868273176,0,0,0.666740183404846,0,0,0.505394423527595,0.760437899670719,0,0.280924522409647,0.0640251524048693,0.287177344778066,0,0.231768651889711,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0.532427418478012,0.715308569841963,1.0174249164263,0.188218760830661,0.761531471025089,0.365855945745545,0.526139422875686,0.407412341537585,0.561142271657738,0.118635018124174,0,0,0.619747364743864,0,0,0,0,0,0.882365676478062,0.927471342481686 | ||
|short_description=p@chr11:61870736..61870740,+ | |short_description=p@chr11:61870736..61870740,+ | ||
}} | }} |
Latest revision as of 06:22, 6 August 2015
Short description: | p@chr11:61870736..61870740, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:61870736..61870740, + |
Coexpression cluster: | MCL_coexpression_mm9:127 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 3.27e-11 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 3.27e-11 | 3 |
Kit-positive megakaryocyte progenitor cell | 3.27e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.58e-15 | 6 |
cavity lining | 2.58e-15 | 6 |
serous membrane | 2.58e-15 | 6 |
gastrointestinal system mesentery | 2.58e-15 | 6 |
stomach region | 2.58e-15 | 6 |
mesentery | 2.58e-15 | 6 |
gastrointestinal system serosa | 2.58e-15 | 6 |
mesentery of stomach | 2.58e-15 | 6 |
gut mesentery | 2.58e-15 | 6 |
dorsal mesentery | 2.58e-15 | 6 |
dorsal mesogastrium | 2.58e-15 | 6 |
peritoneal cavity | 2.58e-15 | 6 |
spleen primordium | 2.58e-15 | 6 |
abdomen element | 1.73e-13 | 49 |
abdominal segment element | 1.73e-13 | 49 |
abdominal segment of trunk | 1.73e-13 | 49 |
abdomen | 1.73e-13 | 49 |
intraembryonic coelom | 1.11e-12 | 10 |
liver | 1.62e-11 | 22 |
epithelial sac | 1.62e-11 | 22 |
digestive gland | 1.62e-11 | 22 |
epithelium of foregut-midgut junction | 1.62e-11 | 22 |
anatomical boundary | 1.62e-11 | 22 |
hepatobiliary system | 1.62e-11 | 22 |
foregut-midgut junction | 1.62e-11 | 22 |
hepatic diverticulum | 1.62e-11 | 22 |
liver primordium | 1.62e-11 | 22 |
septum transversum | 1.62e-11 | 22 |
liver bud | 1.62e-11 | 22 |
digestive tract diverticulum | 5.93e-11 | 23 |
sac | 5.93e-11 | 23 |
exocrine gland | 5.84e-10 | 25 |
exocrine system | 5.84e-10 | 25 |
subdivision of trunk | 2.98e-09 | 66 |
trunk region element | 2.32e-08 | 79 |
trunk | 5.88e-07 | 90 |