FFCP PHASE1:Hg19::chr3:126194707..126194798,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:126194707..126194798,-
|short_description=p1@ZXDC
|description=CAGE_peak_1_at_ZXDC_5end
|association_with_transcript=0bp_to_ENST00000336332,ENST00000389709...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79364 | |EntrezGene=79364 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28160 | |HGNC=28160 | ||
|TSSclassifier=strong | |||
|UniProt=Q2QGD7 | |UniProt=Q2QGD7 | ||
|association_with_transcript=0bp_to_ENST00000336332,ENST00000389709,NM_001040653,NM_025112,uc003eiv.2,uc003eix.2,uc010hsh.2_5end | |||
|cluster_id=chr3:126194707..126194798,- | |||
|description=CAGE_peak_1_at_ZXDC_5end | |||
|id=chr3:126194707..126194798,- | |||
|ontology_enrichment_celltype=CL:0000766!2.15e-21!76;CL:0000738!9.92e-21!140;CL:0002087!3.92e-19!119;CL:0002057!5.33e-19!42;CL:0002031!6.26e-18!124;CL:0000860!7.27e-18!45;CL:0000557!7.61e-18!71;CL:0000037!6.01e-17!172;CL:0000566!6.01e-17!172;CL:0002032!1.45e-16!165;CL:0000837!1.45e-16!165;CL:0002194!2.02e-16!63;CL:0000576!2.02e-16!63;CL:0000040!2.02e-16!63;CL:0000559!2.02e-16!63;CL:0002009!2.88e-16!65;CL:0000988!4.39e-16!182;CL:0000839!6.86e-16!70;CL:0000763!1.67e-13!112;CL:0000049!1.67e-13!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.82e-15;33!CL:0002057;9.82e-15;33!CL:0000576;5.03e-13;48!CL:0000473;6.59e-11;39!CL:0000234;6.59e-11;39!CL:0000766;1.90e-10;69!CL:0002087;3.74e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.15e-23,72;CL:0000738,1.17e-21,136;CL:0002087,3.94e-20,115;CL:0000557,2.57e-19,67;CL:0000860,5.33e-19,42;CL:0002057,5.33e-19,42;CL:0002031,7.63e-19,120;CL:0002194,6.08e-18,59;CL:0000576,6.08e-18,59;CL:0000040,6.08e-18,59;CL:0000559,6.08e-18,59;CL:0002009,9.83e-18,61;CL:0000037,1.29e-17,168;CL:0002032,3.03e-17,161;CL:0000837,3.03e-17,161;CL:0000839,3.09e-17,66;CL:0000988,3.44e-17,177;CL:0000473,6.14e-17,48;CL:0000234,6.14e-17,48;CL:0000763,2.71e-14,108;CL:0000049,2.71e-14,108 | |||
|ontology_enrichment_development_v019=CL:0002057;4.10e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.66e-18!102;UBERON:0003061!1.66e-18!102;UBERON:0007023!3.41e-16!115;UBERON:0002193!3.61e-16!112;UBERON:0002371!1.53e-14!80;UBERON:0001474!1.37e-13!86;UBERON:0002405!1.15e-12!115;UBERON:0004765!1.05e-08!101;UBERON:0001434!1.05e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.30e-19,98;UBERON:0003061,1.30e-19,98;UBERON:0002193,4.40e-17,108;UBERON:0007023,6.03e-16,114;UBERON:0002371,1.19e-15,76;UBERON:0001474,1.41e-14,82;UBERON:0002405,2.12e-13,93;UBERON:0004765,1.17e-10,90;UBERON:0001434,1.60e-08,100 | |||
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| ||
|short_description=p1@ZXDC | |||
}} | }} |
Latest revision as of 04:18, 20 September 2015
Short description: | p1@ZXDC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZXDC_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000336332, ENST00000389709, NM_001040653, NM_025112, uc003eiv.2, uc003eix.2, uc010hsh.2_5end |
EntrezGene: | ZXDC |
HGNC: | 28160 |
UniProt: | Q2QGD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.15e-23 | 72 |
leukocyte | 1.17e-21 | 136 |
nongranular leukocyte | 3.94e-20 | 115 |
granulocyte monocyte progenitor cell | 2.57e-19 | 67 |
classical monocyte | 5.33e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.33e-19 | 42 |
hematopoietic lineage restricted progenitor cell | 7.63e-19 | 120 |
monopoietic cell | 6.08e-18 | 59 |
monocyte | 6.08e-18 | 59 |
monoblast | 6.08e-18 | 59 |
promonocyte | 6.08e-18 | 59 |
macrophage dendritic cell progenitor | 9.83e-18 | 61 |
hematopoietic stem cell | 1.29e-17 | 168 |
hematopoietic oligopotent progenitor cell | 3.03e-17 | 161 |
hematopoietic multipotent progenitor cell | 3.03e-17 | 161 |
myeloid lineage restricted progenitor cell | 3.09e-17 | 66 |
hematopoietic cell | 3.44e-17 | 177 |
defensive cell | 6.14e-17 | 48 |
phagocyte | 6.14e-17 | 48 |
myeloid cell | 2.71e-14 | 108 |
common myeloid progenitor | 2.71e-14 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.30e-19 | 98 |
blood island | 1.30e-19 | 98 |
hemolymphoid system | 4.40e-17 | 108 |
adult organism | 6.03e-16 | 114 |
bone marrow | 1.19e-15 | 76 |
bone element | 1.41e-14 | 82 |
immune system | 2.12e-13 | 93 |
skeletal element | 1.17e-10 | 90 |
skeletal system | 1.60e-08 | 100 |