FFCP PHASE1:Hg19::chr3:133307647..133307661,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:133307647..133307661,+
|short_description=p7@CDV3
|description=CAGE_peak_7_at_CDV3_5end
|association_with_transcript=-134bp_to_AK026272_5end
|EntrezGene=5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55573 | |EntrezGene=55573 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=26928 | |HGNC=26928 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-134bp_to_AK026272_5end | |||
|cluster_id=chr3:133307647..133307661,+ | |||
|description=CAGE_peak_7_at_CDV3_5end | |||
|id=chr3:133307647..133307661,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.64e-23!119;CL:0000738!8.28e-20!140;CL:0002031!1.40e-19!124;CL:0000037!4.27e-18!172;CL:0000566!4.27e-18!172;CL:0002032!7.15e-18!165;CL:0000837!7.15e-18!165;CL:0000860!4.14e-16!45;CL:0002057!1.49e-15!42;CL:0000988!1.55e-15!182;CL:0002009!2.66e-15!65;CL:0002194!5.15e-15!63;CL:0000576!5.15e-15!63;CL:0000040!5.15e-15!63;CL:0000559!5.15e-15!63;CL:0000766!1.15e-12!76;CL:0000063!6.75e-12!578;CL:0000557!7.96e-12!71;CL:0000839!1.78e-11!70;CL:0000003!1.84e-11!722;CL:0000012!7.04e-11!682;CL:0000548!9.45e-11!679;CL:0000004!9.45e-11!679;CL:0000255!9.45e-11!679;CL:0000763!1.02e-09!112;CL:0000049!1.02e-09!112;CL:0000134!4.16e-09!358;CL:0000542!1.01e-08!53;CL:0000051!1.01e-08!53;CL:0002320!1.42e-08!365;CL:0000838!2.77e-08!52;CL:0000219!6.35e-08!390;CL:0000048!5.33e-07!430;CL:0000034!7.11e-07!444;CL:0000723!9.42e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.65e-12;33!CL:0002057;5.65e-12;33!CL:0000473;1.35e-11;39!CL:0000234;1.35e-11;39!CL:0000576;1.09e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,7.06e-23,115;CL:0000738,4.90e-19,136;CL:0002031,7.70e-19,120;CL:0000037,1.84e-17,168;CL:0002032,2.72e-17,161;CL:0000837,2.72e-17,161;CL:0000473,5.77e-17,48;CL:0000234,5.77e-17,48;CL:0000860,1.08e-15,42;CL:0002057,1.08e-15,42;CL:0000988,2.42e-15,177;CL:0002009,9.57e-15,61;CL:0002194,1.85e-14,59;CL:0000576,1.85e-14,59;CL:0000040,1.85e-14,59;CL:0000559,1.85e-14,59;CL:0000766,4.25e-12,72;CL:0000557,2.31e-11,67;CL:0000839,8.52e-11,66;CL:0000134,2.97e-09,354;CL:0000763,3.24e-09,108;CL:0000049,3.24e-09,108;CL:0000542,9.69e-09,53;CL:0000051,9.69e-09,53;CL:0002320,1.19e-08,361;CL:0000838,2.67e-08,52;CL:0000219,4.97e-08,386;CL:0000048,2.12e-07,427;CL:0000034,2.63e-07,441;CL:0000723,3.48e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;9.00e-12;42 | |||
|ontology_enrichment_disease=DOID:14566!5.70e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.49e-10!80;UBERON:0001474!2.83e-09!86;UBERON:0004765!4.63e-08!101;UBERON:0001434!4.63e-08!101;UBERON:0002384!5.80e-08!375;UBERON:0002390!1.11e-07!102;UBERON:0003061!1.11e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.41e-10,76;UBERON:0001474,7.56e-09,82;UBERON:0004765,3.49e-08,90;UBERON:0002384,6.51e-08,371;UBERON:0001434,8.37e-08,100;UBERON:0002390,2.92e-07,98;UBERON:0003061,2.92e-07,98;UBERON:0002405,3.70e-07,93 | |||
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| ||
|short_description=p7@CDV3 | |||
}} | }} |
Latest revision as of 21:24, 24 September 2015
Short description: | p7@CDV3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CDV3_5end |
Coexpression cluster: | NA |
Association with transcript: | -134bp_to_AK026272_5end |
EntrezGene: | CDV3 |
HGNC: | 26928 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.41e-10 | 76 |
bone element | 7.56e-09 | 82 |
skeletal element | 3.49e-08 | 90 |
connective tissue | 6.51e-08 | 371 |
skeletal system | 8.37e-08 | 100 |
hematopoietic system | 2.92e-07 | 98 |
blood island | 2.92e-07 | 98 |
immune system | 3.70e-07 | 93 |