FFCP PHASE1:Hg19::chr3:45982401..45982426,+: Difference between revisions
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|id=chr3:45982401..45982426,+
|short_description=p3@CXCR6
|description=CAGE_peak_3_at_CXCR6_5end
|association_with_transcript=0bp_to_ENST00000438735_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10663 | |EntrezGene=10663 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16647 | |HGNC=16647 | ||
|TSSclassifier=strong | |||
|UniProt=O00574 | |UniProt=O00574 | ||
|association_with_transcript=0bp_to_ENST00000438735_5end | |||
|cluster_id=chr3:45982401..45982426,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_3_at_CXCR6_5end | |||
|id=chr3:45982401..45982426,+ | |||
|ontology_enrichment_celltype=CL:0002541!8.11e-51!3;CL:0000039!6.11e-22!7;CL:0000586!6.11e-22!7 | |||
|ontology_enrichment_celltype_v019=CL:0002541;3.47e-55;3!CL:0000039;8.36e-24;7!CL:0000586;8.36e-24;7!CL:0000349;1.06e-15;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.47e-55,3;CL:0000039,8.36e-24,7;CL:0000586,8.36e-24,7;CL:0000349,1.06e-15,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.25e-19;1 | |||
|ontology_enrichment_disease=DOID:1799!1.22e-17!1;DOID:10165!1.22e-17!1;DOID:1798!1.22e-17!1;DOID:3095!2.12e-07!22;DOID:2994!2.12e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:1799;3.91e-19;1!DOID:10165;3.91e-19;1!DOID:1798;3.91e-19;1!DOID:3095;5.14e-08;22!DOID:2994;5.14e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,4.69e-19,1;DOID:10165,4.69e-19,1;DOID:1798,4.69e-19,1;DOID:3095,5.14e-08,22;DOID:2994,5.14e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000476!8.11e-51!3;UBERON:0000920!8.11e-51!3;UBERON:0003124!1.73e-38!7;UBERON:0005631!8.01e-30!14;UBERON:0000158!8.01e-30!14;UBERON:0000478!1.81e-17!24;UBERON:0004923!2.26e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.47e-55;3!UBERON:0000920;3.47e-55;3!UBERON:0005631;2.04e-29;10!UBERON:0000158;2.04e-29;10!UBERON:0000478;5.03e-19;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.47e-55,3;UBERON:0003124,7.97e-42,7;UBERON:0005631,1.90e-32,14;UBERON:0000158,1.90e-32,14;UBERON:0000478,5.03e-19,24;UBERON:0004923,5.85e-07,66 | |||
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|short_description=p3@CXCR6 | |||
}} | }} |
Latest revision as of 09:37, 18 September 2015
Short description: | p3@CXCR6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CXCR6_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000438735_5end |
EntrezGene: | CXCR6 |
HGNC: | 16647 |
UniProt: | O00574 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.47e-55 | 3 |
germ line cell | 8.36e-24 | 7 |
germ cell | 8.36e-24 | 7 |
extraembryonic cell | 1.06e-15 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.47e-55 | 3 |
chorion | 7.97e-42 | 7 |
extraembryonic membrane | 1.90e-32 | 14 |
membranous layer | 1.90e-32 | 14 |
extraembryonic structure | 5.03e-19 | 24 |
organ component layer | 5.85e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 4.69e-19 | 1 |
endocrine pancreas cancer | 4.69e-19 | 1 |
pancreatic endocrine carcinoma | 4.69e-19 | 1 |
germ cell and embryonal cancer | 5.14e-08 | 22 |
germ cell cancer | 5.14e-08 | 22 |