FFCP PHASE1:Hg19::chr4:186854336..186854358,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:186854336..186854358,-
|short_description=p41@SORBS2
|description=CAGE_peak_41_at_SORBS2_5end
|association_with_transcript=165bp_to_ENST00000488562_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8470 | |EntrezGene=8470 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24098 | |HGNC=24098 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=165bp_to_ENST00000488562_5end | |||
|cluster_id=chr4:186854336..186854358,- | |||
|coexpression_cluster_id=C139 | |||
|description=CAGE_peak_41_at_SORBS2_5end | |||
|id=chr4:186854336..186854358,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000319;3.16e-18;1!CL:0000159;8.68e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,3.16e-18,1;CL:0000159,8.69e-10,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.42e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3030;3.16e-18;1!DOID:6193;8.01e-18;1!DOID:3350;1.38e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,3.16e-18,1;DOID:6193,1.70e-17,1;DOID:3350,2.02e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001893!8.46e-28!34;UBERON:0001869!2.29e-27!32;UBERON:0002619!2.56e-27!22;UBERON:0001950!9.92e-27!20;UBERON:0002791!5.72e-26!33;UBERON:0002020!4.09e-25!34;UBERON:0003528!4.09e-25!34;UBERON:0002780!3.10e-24!41;UBERON:0001890!3.10e-24!41;UBERON:0006240!3.10e-24!41;UBERON:0000956!1.41e-23!25;UBERON:0000203!1.41e-23!25;UBERON:0003080!1.65e-23!42;UBERON:0001049!3.33e-22!57;UBERON:0005068!3.33e-22!57;UBERON:0006241!3.33e-22!57;UBERON:0007135!3.33e-22!57;UBERON:0002616!3.37e-21!59;UBERON:0000955!5.77e-20!69;UBERON:0006238!5.77e-20!69;UBERON:0003056!8.13e-19!61;UBERON:0003075!7.71e-16!86;UBERON:0007284!7.71e-16!86;UBERON:0005743!8.75e-16!86;UBERON:0001017!1.35e-15!82;UBERON:0000200!5.37e-15!6;UBERON:0002346!8.88e-15!90;UBERON:0000073!1.31e-14!94;UBERON:0001016!1.31e-14!94;UBERON:0000033!3.41e-13!123;UBERON:0000153!3.64e-12!129;UBERON:0007811!3.64e-12!129;UBERON:0007023!9.26e-12!115;UBERON:0001871!8.54e-11!7;UBERON:0002771!2.38e-08!3;UBERON:0002021!3.51e-08!5;UBERON:0000349!3.85e-08!5;UBERON:0004905!2.67e-07!5;UBERON:0000982!2.67e-07!5;UBERON:0004770!2.67e-07!5;UBERON:0004121!3.83e-07!169;UBERON:0000924!8.48e-07!173;UBERON:0006601!8.48e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002022;8.01e-18;1!UBERON:0002118;3.59e-14;5!UBERON:0002702;1.38e-09;2!UBERON:0001950;1.10e-07;20!UBERON:0002619;4.63e-07;22!UBERON:0001870;8.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002022,5.26e-18,1;UBERON:0002118,3.84e-14,5;UBERON:0002702,1.71e-09,2;UBERON:0001950,1.12e-07,20;UBERON:0002619,4.68e-07,22;UBERON:0001870,9.64e-07,3 | |||
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| ||
|short_description=p41@SORBS2 | |||
}} | }} |
Latest revision as of 04:13, 17 September 2015
Short description: | p41@SORBS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_41_at_SORBS2_5end |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | 165bp_to_ENST00000488562_5end |
EntrezGene: | SORBS2 |
HGNC: | 24098 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 3.16e-18 | 1 |
seromucus secreting cell | 8.69e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
insula | 5.26e-18 | 1 |
right ovary | 3.84e-14 | 5 |
middle frontal gyrus | 1.71e-09 | 2 |
neocortex | 1.12e-07 | 20 |
regional part of cerebral cortex | 4.68e-07 | 22 |
frontal cortex | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 3.16e-18 | 1 |
epithelioid sarcoma | 1.70e-17 | 1 |
mesenchymal cell neoplasm | 2.02e-09 | 2 |