FFCP PHASE1:Hg19::chr4:189321717..189321731,+: Difference between revisions
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|id=chr4:189321717..189321731,+
|short_description=p2@ENST00000512839,p2@ENST00000513313,p2@uc003izo.1
|description=CAGE_peak_2_at_ENST00000512839_5end,CAGE_peak_2_a...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-158bp_to_ENST00000512839,ENST00000513313,uc003izo.1_5end | |||
|cluster_id=chr4:189321717..189321731,+ | |||
|coexpression_cluster_id=C77 | |||
|description=CAGE_peak_2_at_ENST00000512839_5end,CAGE_peak_2_at_ENST00000513313_5end,CAGE_peak_2_at_uc003izo.1_5end | |||
|id=chr4:189321717..189321731,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.18e-26!180;CL:0002620!2.97e-24!23;CL:0000057!2.74e-23!75;CL:0002570!1.47e-11!8;CL:0002551!4.21e-11!6;CL:0000048!7.42e-11!430;CL:0000034!8.25e-11!444;CL:0000723!2.12e-10!436;CL:0002334!2.59e-10!12;CL:0000188!4.97e-08!9;CL:0000569!1.81e-07!4;CL:0000011!1.81e-07!4;CL:0002556!2.92e-07!6;CL:0000219!6.16e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.55e-20;23!CL:0002570;6.36e-20;8!CL:0002551;1.21e-09;6!CL:0000062;3.93e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.38e-20,23;CL:0002570,5.24e-20,8;CL:0002551,1.09e-09,6;CL:0000057,2.10e-09,76;CL:0000134,6.31e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.88e-09!5;DOID:450!2.88e-09!5;DOID:66!2.88e-09!5;DOID:423!2.88e-09!5;DOID:0080000!2.88e-09!5;DOID:11722!2.88e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.14e-11;5!DOID:450;1.14e-11;5!DOID:66;1.14e-11;5!DOID:423;1.14e-11;5!DOID:0080000;1.14e-11;5!DOID:11722;1.14e-11;5!DOID:2513;5.22e-08;1!DOID:3369;2.24e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.18e-12,5;DOID:450,8.18e-12,5;DOID:66,8.18e-12,5;DOID:423,8.18e-12,5;DOID:0080000,8.18e-12,5;DOID:11722,8.18e-12,5;DOID:2513,5.22e-08,1;DOID:3369,2.31e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.12e-18!45;UBERON:0002416!1.12e-18!45;UBERON:0002097!1.15e-14!40;UBERON:0000914!4.15e-12!83;UBERON:0002329!4.15e-12!83;UBERON:0003077!4.15e-12!83;UBERON:0003059!4.15e-12!83;UBERON:0007282!4.15e-12!83;UBERON:0009618!4.15e-12!83;UBERON:0007285!4.15e-12!83;UBERON:0003102!3.15e-11!95;UBERON:0001013!9.69e-10!14;UBERON:0004290!1.75e-08!70;UBERON:0000486!9.12e-08!82;UBERON:0001758!2.92e-07!6;UBERON:0003672!2.92e-07!6;UBERON:0002067!4.52e-07!9;UBERON:0004016!4.52e-07!9;UBERON:0010083!4.52e-07!9;UBERON:0003129!8.37e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;5.49e-16;14!UBERON:0002199;6.09e-11;46!UBERON:0002416;6.09e-11;46!UBERON:0002097;4.39e-10;41!UBERON:0003102;7.49e-09;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,3.38e-17,46;UBERON:0002416,3.38e-17,46;UBERON:0001013,4.82e-16,14;UBERON:0002097,1.85e-13,41;UBERON:0002384,6.56e-09,371;UBERON:0003102,4.55e-08,99 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,2.52687949370732,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,1.5608003841516,1.1409436430889,0.896692083310806,0.23486899728753,0.971237666208789,1.82586048712923,0,0,0,0,0.494533858557114,0.910161361938026,0,0.336672227908132,0.125118519871964,0,0.877955241761676,1.22595118319608,0.901428353439581,0,2.87023417102179,0.640672166455702,1.48352330811693,1.80054657650641,0.103052529238439,0.772921620136887,0,0.168776332241266,0,2.52433774244115,0.368199594569197,0.161646056818812,2.84007674013291,1.5112814734146,0.67824236924195,0.193260853163297,0,0,0.365921118388786,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.567100388969546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.535908257668,0,0,0,0,0,0,0,0,2.60588947434988,0,0,0,0,0,0,0,0,0.239624855491583,0,0,1.44781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.744323423456331,0.61384789315225,0,0.128139149255701,0,0.321707842287215,0,0.462629081407967,1.77561725313127,0.164254312027618,2.07701771673448,0.697262270759755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.4199906544906,31.7661574694264,0,0,0,0.386682873168488,0.462145851343933,0.767518373630648,0.137836572484531,0.214840489736547,0.145016693914229,0.340906509664404,0,0,0,0.255225424989168,0,0,0.94443704049192,0.6970372701606,0,0.532306030317022,0.869932992075073,0,0.286249773483982,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0.606547444719948,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,6.53183134089796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,4.54416143458391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643012593860077,0.550157746388935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,2.3854323049959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,2.83584125485061,2.33713309847224,4.99325275352352,2.08343305802598,0.251567901752575,0.889811221596536,0.457680136793847,1.05861646634267,0.777186002913902,0.295710299979268,0,0.449803112163605,0.155262956876259,0,0.53168342911599,0,0,1.52322084867518,0,2.00033525122815,0,0,4.77715066438339,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0.123935764259002,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,2.78482710962785,0,10.2869585038795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0.67767649223376,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305966489225945,0,0.643264296743914,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,2.52687949370732,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,1.5608003841516,1.1409436430889,0.896692083310806,0.23486899728753,0.971237666208789,1.82586048712923,0,0,0,0,0.494533858557114,0.910161361938026,0,0.336672227908132,0.125118519871964,0,0.877955241761676,1.22595118319608,0.901428353439581,0,2.87023417102179,0.640672166455702,1.48352330811693,1.80054657650641,0.103052529238439,0.772921620136887,0,0.168776332241266,0,2.52433774244115,0.368199594569197,0.161646056818812,2.84007674013291,1.5112814734146,0.67824236924195,0.193260853163297,0,0,0.365921118388786,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.567100388969546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.535908257668,0,0,0,0,0,0,0,0,2.60588947434988,0,0,0,0,0,0,0,0,0.239624855491583,0,0,1.44781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.744323423456331,0.61384789315225,0,0.128139149255701,0,0.321707842287215,0,0.462629081407967,1.77561725313127,0.164254312027618,2.07701771673448,0.697262270759755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.4199906544906,31.7661574694264,0,0,0,0.386682873168488,0.462145851343933,0.767518373630648,0.137836572484531,0.214840489736547,0.145016693914229,0.340906509664404,0,0,0,0.255225424989168,0,0,0.94443704049192,0.6970372701606,0,0.532306030317022,0.869932992075073,0,0.286249773483982,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0.606547444719948,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,6.53183134089796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,4.54416143458391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643012593860077,0.550157746388935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,2.3854323049959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,2.83584125485061,2.33713309847224,4.99325275352352,2.08343305802598,0.251567901752575,0.889811221596536,0.457680136793847,1.05861646634267,0.777186002913902,0.295710299979268,0,0.449803112163605,0.155262956876259,0,0.53168342911599,0,0,1.52322084867518,0,2.00033525122815,0,0,4.77715066438339,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0.123935764259002,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,2.78482710962785,0,10.2869585038795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0.67767649223376,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305966489225945,0,0.643264296743914,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@ENST00000512839,p2@ENST00000513313,p2@uc003izo.1 | |||
}} | }} |
Latest revision as of 04:12, 30 July 2015
Short description: | p2@ENST00000512839, p2@ENST00000513313, p2@uc003izo.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000512839_5end, CAGE_peak_2_at_ENST00000513313_5end, CAGE_peak_2_at_uc003izo.1_5end |
Coexpression cluster: | C77_Saos2_osteosarcoma_Neutrophils_Natural_Chondrocyte_Basophils_CD8 |
Association with transcript: | -158bp_to_ENST00000512839, ENST00000513313, uc003izo.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.38e-20 | 23 |
mesenchymal stem cell of adipose | 5.24e-20 | 8 |
fibroblast of dermis | 1.09e-09 | 6 |
fibroblast | 2.10e-09 | 76 |
mesenchymal cell | 6.31e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
integument | 3.38e-17 | 46 |
integumental system | 3.38e-17 | 46 |
adipose tissue | 4.82e-16 | 14 |
skin of body | 1.85e-13 | 41 |
connective tissue | 6.56e-09 | 371 |
surface structure | 4.55e-08 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.18e-12 | 5 |
myotonic disease | 8.18e-12 | 5 |
muscle tissue disease | 8.18e-12 | 5 |
myopathy | 8.18e-12 | 5 |
muscular disease | 8.18e-12 | 5 |
myotonic dystrophy | 8.18e-12 | 5 |
basal cell carcinoma | 5.22e-08 | 1 |
peripheral primitive neuroectodermal tumor | 2.31e-07 | 1 |