FFCP PHASE1:Hg19::chr4:87928413..87928433,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:87928413..87928433,+
|short_description=p3@AFF1
|description=CAGE_peak_3_at_AFF1_5end
|association_with_transcript=0bp_to_ENST00000544085_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4299 | |EntrezGene=4299 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7135 | |HGNC=7135 | ||
|TSSclassifier=strong | |||
|UniProt=F5GXF9 | |UniProt=F5GXF9 | ||
|association_with_transcript=0bp_to_ENST00000544085_5end | |||
|cluster_id=chr4:87928413..87928433,+ | |||
|description=CAGE_peak_3_at_AFF1_5end | |||
|id=chr4:87928413..87928433,+ | |||
|ontology_enrichment_celltype=CL:0000763!8.20e-18!112;CL:0000049!8.20e-18!112;CL:0000766!6.63e-12!76;CL:0000557!3.74e-10!71;CL:0000839!4.19e-10!70;CL:0002032!2.87e-09!165;CL:0000837!2.87e-09!165;CL:0000037!2.28e-08!172;CL:0000566!2.28e-08!172;CL:0002009!5.99e-08!65;CL:0002057!1.24e-07!42;CL:0002194!2.73e-07!63;CL:0000576!2.73e-07!63;CL:0000040!2.73e-07!63;CL:0000559!2.73e-07!63;CL:0000988!3.89e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.70e-10;33!CL:0002057;2.70e-10;33!CL:0000473;1.57e-08;39!CL:0000234;1.57e-08;39!CL:0000763;7.34e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.85e-19,108;CL:0000049,2.85e-19,108;CL:0000766,2.44e-13,72;CL:0000557,1.73e-11,67;CL:0000839,1.90e-11,66;CL:0002032,5.33e-10,161;CL:0000837,5.33e-10,161;CL:0002009,4.00e-09,61;CL:0000037,5.07e-09,168;CL:0002194,2.06e-08,59;CL:0000576,2.06e-08,59;CL:0000040,2.06e-08,59;CL:0000559,2.06e-08,59;CL:0000473,1.07e-07,48;CL:0000234,1.07e-07,48;CL:0000860,1.24e-07,42;CL:0002057,1.24e-07,42;CL:0000988,1.30e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.86e-34!115;UBERON:0002193!8.43e-11!112;UBERON:0002390!2.37e-10!102;UBERON:0003061!2.37e-10!102;UBERON:0002405!1.75e-09!115;UBERON:0002371!5.33e-08!80;UBERON:0001474!1.12e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.97e-09;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.85e-34,114;UBERON:0002193,8.35e-12,108;UBERON:0002390,2.18e-11,98;UBERON:0003061,2.18e-11,98;UBERON:0002405,2.95e-09,93;UBERON:0002371,5.09e-09,76;UBERON:0001474,1.23e-08,82 | |||
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| ||
|short_description=p3@AFF1 | |||
}} | }} |
Latest revision as of 04:53, 19 September 2015
Short description: | p3@AFF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AFF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000544085_5end |
EntrezGene: | AFF1 |
HGNC: | 7135 |
UniProt: | F5GXF9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.85e-19 | 108 |
common myeloid progenitor | 2.85e-19 | 108 |
myeloid leukocyte | 2.44e-13 | 72 |
granulocyte monocyte progenitor cell | 1.73e-11 | 67 |
myeloid lineage restricted progenitor cell | 1.90e-11 | 66 |
hematopoietic oligopotent progenitor cell | 5.33e-10 | 161 |
hematopoietic multipotent progenitor cell | 5.33e-10 | 161 |
macrophage dendritic cell progenitor | 4.00e-09 | 61 |
hematopoietic stem cell | 5.07e-09 | 168 |
monopoietic cell | 2.06e-08 | 59 |
monocyte | 2.06e-08 | 59 |
monoblast | 2.06e-08 | 59 |
promonocyte | 2.06e-08 | 59 |
defensive cell | 1.07e-07 | 48 |
phagocyte | 1.07e-07 | 48 |
classical monocyte | 1.24e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.24e-07 | 42 |
hematopoietic cell | 1.30e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.85e-34 | 114 |
hemolymphoid system | 8.35e-12 | 108 |
hematopoietic system | 2.18e-11 | 98 |
blood island | 2.18e-11 | 98 |
immune system | 2.95e-09 | 93 |
bone marrow | 5.09e-09 | 76 |
bone element | 1.23e-08 | 82 |