FFCP PHASE1:Hg19::chr6:72926685..72926703,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22999 | |EntrezGene=22999 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17282 | |HGNC=17282 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z3S3,B7Z2Q9,B7Z9Z3,Q3ZCW0 | |UniProt=B7Z3S3,B7Z2Q9,B7Z9Z3,Q3ZCW0 | ||
|association_with_transcript=222bp_to_ENST00000517827,ENST00000524197,NM_001168410,uc010kas.1,uc011dyd.1_5end | |association_with_transcript=222bp_to_ENST00000517827,ENST00000524197,NM_001168410,uc010kas.1,uc011dyd.1_5end | ||
|cluster_id=chr6:72926685..72926703,+ | |||
|coexpression_cluster_id=C247 | |coexpression_cluster_id=C247 | ||
|description=CAGE_peak_18_at_RIMS1_5end | |description=CAGE_peak_18_at_RIMS1_5end | ||
Latest revision as of 16:47, 19 September 2015
| Short description: | p18@RIMS1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_18_at_RIMS1_5end |
| Coexpression cluster: | C247_pons_locus_medulla_spinal_paracentral_medial_occipital |
| Association with transcript: | 222bp_to_ENST00000517827, ENST00000524197, NM_001168410, uc010kas.1, uc011dyd.1_5end |
| EntrezGene: | RIMS1 |
| HGNC: | 17282 |
| UniProt: | B7Z3S3B7Z2Q9B7Z9Z3Q3ZCW0 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p18@RIMS1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| paracentral gyrus | 1.33e-29 | 1 |
| regional part of nervous system | 8.37e-26 | 53 |
| regional part of brain | 8.37e-26 | 53 |
| neural tube | 1.82e-24 | 56 |
| neural rod | 1.82e-24 | 56 |
| future spinal cord | 1.82e-24 | 56 |
| neural keel | 1.82e-24 | 56 |
| parietal lobe | 2.02e-23 | 5 |
| neocortex | 6.45e-22 | 20 |
| cerebral hemisphere | 1.12e-21 | 32 |
Showing 1 to 10 of 51 entries
