FFCP PHASE1:Hg19::chr5:142783792..142783842,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:142783792..142783842,-
|short_description=p5@NR3C1
|description=CAGE_peak_5_at_NR3C1_5end
|association_with_transcript=-98bp_to_ENST00000394466_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2908 | |EntrezGene=2908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7978 | |HGNC=7978 | ||
|TSSclassifier=strong | |||
|UniProt=P04150 | |UniProt=P04150 | ||
|association_with_transcript=-98bp_to_ENST00000394466_5end | |||
|cluster_id=chr5:142783792..142783842,- | |||
|description=CAGE_peak_5_at_NR3C1_5end | |||
|id=chr5:142783792..142783842,- | |||
|ontology_enrichment_celltype=CL:0000738!1.57e-17!140;CL:0002087!7.12e-17!119;CL:0002031!8.10e-17!124;CL:0000860!1.69e-13!45;CL:0000037!1.87e-12!172;CL:0000566!1.87e-12!172;CL:0002057!2.36e-12!42;CL:0000988!2.61e-12!182;CL:0002032!1.98e-10!165;CL:0000837!1.98e-10!165;CL:0000134!3.44e-10!358;CL:0000557!1.35e-09!71;CL:0002320!1.72e-09!365;CL:0000766!6.56e-09!76;CL:0000838!8.81e-09!52;CL:0002009!1.54e-08!65;CL:0000839!1.60e-08!70;CL:0000542!2.19e-08!53;CL:0000051!2.19e-08!53;CL:0002194!2.68e-08!63;CL:0000576!2.68e-08!63;CL:0000040!2.68e-08!63;CL:0000559!2.68e-08!63;CL:0000219!2.15e-07!390;CL:0000048!2.42e-07!430;CL:0000723!2.48e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.23e-11;33!CL:0002057;4.23e-11;33!CL:0000576;8.77e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.14e-18,136;CL:0002087,1.49e-16,115;CL:0002031,8.96e-16,120;CL:0000860,7.79e-14,42;CL:0002057,7.79e-14,42;CL:0000988,8.11e-13,177;CL:0000037,9.17e-13,168;CL:0000557,1.10e-10,67;CL:0000766,1.47e-10,72;CL:0000473,1.77e-10,48;CL:0000234,1.77e-10,48;CL:0002032,2.34e-10,161;CL:0000837,2.34e-10,161;CL:0000134,6.04e-10,354;CL:0002194,1.79e-09,59;CL:0000576,1.79e-09,59;CL:0000040,1.79e-09,59;CL:0000559,1.79e-09,59;CL:0000839,2.00e-09,66;CL:0002009,2.05e-09,61;CL:0002320,3.45e-09,361;CL:0000219,4.58e-08,386;CL:0000838,4.07e-07,52;CL:0000048,7.43e-07,427;CL:0000542,8.61e-07,53;CL:0000051,8.61e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;6.74e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.42e-12!102;UBERON:0003061!9.42e-12!102;UBERON:0002193!8.81e-10!112;UBERON:0002371!3.55e-09!80;UBERON:0001474!7.47e-09!86;UBERON:0002384!1.07e-08!375;UBERON:0004765!9.34e-08!101;UBERON:0001434!9.34e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.45e-12,98;UBERON:0003061,1.45e-12,98;UBERON:0002193,2.87e-10,108;UBERON:0002371,5.23e-10,76;UBERON:0001474,8.63e-09,82;UBERON:0002384,9.74e-09,371;UBERON:0002405,7.51e-08,93;UBERON:0004765,1.36e-07,90 | |||
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| ||
|short_description=p5@NR3C1 | |||
}} | }} |
Latest revision as of 07:41, 25 September 2015
Short description: | p5@NR3C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NR3C1_5end |
Coexpression cluster: | NA |
Association with transcript: | -98bp_to_ENST00000394466_5end |
EntrezGene: | NR3C1 |
HGNC: | 7978 |
UniProt: | P04150 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.14e-18 | 136 |
nongranular leukocyte | 1.49e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 8.96e-16 | 120 |
classical monocyte | 7.79e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.79e-14 | 42 |
hematopoietic cell | 8.11e-13 | 177 |
hematopoietic stem cell | 9.17e-13 | 168 |
granulocyte monocyte progenitor cell | 1.10e-10 | 67 |
myeloid leukocyte | 1.47e-10 | 72 |
defensive cell | 1.77e-10 | 48 |
phagocyte | 1.77e-10 | 48 |
hematopoietic oligopotent progenitor cell | 2.34e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.34e-10 | 161 |
mesenchymal cell | 6.04e-10 | 354 |
monopoietic cell | 1.79e-09 | 59 |
monocyte | 1.79e-09 | 59 |
monoblast | 1.79e-09 | 59 |
promonocyte | 1.79e-09 | 59 |
myeloid lineage restricted progenitor cell | 2.00e-09 | 66 |
macrophage dendritic cell progenitor | 2.05e-09 | 61 |
connective tissue cell | 3.45e-09 | 361 |
motile cell | 4.58e-08 | 386 |
lymphoid lineage restricted progenitor cell | 4.07e-07 | 52 |
multi fate stem cell | 7.43e-07 | 427 |
lymphocyte | 8.61e-07 | 53 |
common lymphoid progenitor | 8.61e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.45e-12 | 98 |
blood island | 1.45e-12 | 98 |
hemolymphoid system | 2.87e-10 | 108 |
bone marrow | 5.23e-10 | 76 |
bone element | 8.63e-09 | 82 |
connective tissue | 9.74e-09 | 371 |
immune system | 7.51e-08 | 93 |
skeletal element | 1.36e-07 | 90 |