FFCP PHASE1:Hg19::chr5:154135453..154135485,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:154135453..154135485,+
|short_description=p23@LARP1
|description=CAGE_peak_23_at_LARP1_5end
|association_with_transcript=-59bp_to_ENST00000517616_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23367 | |EntrezGene=23367 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29531 | |HGNC=29531 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-59bp_to_ENST00000517616_5end | |||
|cluster_id=chr5:154135453..154135485,+ | |||
|description=CAGE_peak_23_at_LARP1_5end | |||
|id=chr5:154135453..154135485,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.14e-10!254 | |||
|ontology_enrichment_celltype_v019=CL:0000039;8.90e-16;7!CL:0000586;8.90e-16;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.21e-16,7;CL:0000586,3.21e-16,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.07e-15;10!UBERON:0005564;1.07e-15;10 | |||
|ontology_enrichment_disease=DOID:0050687!9.61e-16!143;DOID:305!7.15e-14!106;DOID:162!2.17e-11!235;DOID:14566!2.60e-11!239 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.58e-10;4!DOID:1612;1.58e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,7.68e-11,4;DOID:1612,7.68e-11,4;DOID:305,5.76e-08,106;DOID:0050687,1.76e-07,143;DOID:3095,9.56e-07,22;DOID:2994,9.56e-07,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;2.61e-19;11!UBERON:0000473;4.49e-14;8!UBERON:0003101;3.79e-09;22!UBERON:0000079;3.79e-09;22!UBERON:0000310;2.57e-07;10!UBERON:0000991;4.00e-07;21!UBERON:0006947;6.60e-07;3!UBERON:0004054;6.60e-07;3!UBERON:0003133;7.79e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,9.88e-20,11;UBERON:0000473,3.08e-14,8;UBERON:0003101,2.40e-09,22;UBERON:0000079,2.40e-09,22;UBERON:0003133,3.55e-09,48;UBERON:0000310,1.86e-07,10;UBERON:0000991,2.78e-07,21;UBERON:0009196,2.78e-07,21;UBERON:0009117,2.78e-07,21;UBERON:0005564,2.78e-07,21;UBERON:0006947,3.52e-07,3;UBERON:0004054,3.52e-07,3;UBERON:0005156,4.65e-07,59;UBERON:0000990,4.65e-07,59;UBERON:0004176,6.41e-07,22;UBERON:0001443,8.86e-07,11 | |||
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| ||
|short_description=p23@LARP1 | |||
}} | }} |
Latest revision as of 12:09, 16 September 2015
Short description: | p23@LARP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_LARP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -59bp_to_ENST00000517616_5end |
EntrezGene: | LARP1 |
HGNC: | 29531 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.21e-16 | 7 |
germ cell | 3.21e-16 | 7 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 9.88e-20 | 11 |
testis | 3.08e-14 | 8 |
male organism | 2.40e-09 | 22 |
male reproductive system | 2.40e-09 | 22 |
reproductive organ | 3.55e-09 | 48 |
breast | 1.86e-07 | 10 |
gonad | 2.78e-07 | 21 |
indifferent external genitalia | 2.78e-07 | 21 |
indifferent gonad | 2.78e-07 | 21 |
gonad primordium | 2.78e-07 | 21 |
male genital duct | 3.52e-07 | 3 |
internal male genitalia | 3.52e-07 | 3 |
reproductive structure | 4.65e-07 | 59 |
reproductive system | 4.65e-07 | 59 |
external genitalia | 6.41e-07 | 22 |
chest | 8.86e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 7.68e-11 | 4 |
breast cancer | 7.68e-11 | 4 |
carcinoma | 5.76e-08 | 106 |
cell type cancer | 1.76e-07 | 143 |
germ cell and embryonal cancer | 9.56e-07 | 22 |
germ cell cancer | 9.56e-07 | 22 |