FFCP PHASE1:Hg19::chr19:45908286..45908291,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10848 | |EntrezGene=10848 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18838 | |HGNC=18838 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WUF5 | |UniProt=Q8WUF5 | ||
|association_with_transcript=20bp_to_ENST00000360957,NM_006663,uc002pbn.2_5end | |association_with_transcript=20bp_to_ENST00000360957,NM_006663,uc002pbn.2_5end | ||
|cluster_id=chr19:45908286..45908291,- | |||
|coexpression_cluster_id=C3802 | |coexpression_cluster_id=C3802 | ||
|description=CAGE_peak_3_at_PPP1R13L_5end | |description=CAGE_peak_3_at_PPP1R13L_5end |
Latest revision as of 17:01, 18 September 2015
Short description: | p3@PPP1R13L |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PPP1R13L_5end |
Coexpression cluster: | C3802_Sebocyte_Urothelial_Corneal_Mammary_large_salivary_Bronchial |
Association with transcript: | 20bp_to_ENST00000360957, NM_006663, uc002pbn.2_5end |
EntrezGene: | PPP1R13L |
HGNC: | 18838 |
UniProt: | Q8WUF5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@PPP1R13L |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.72e-21 | 42 |
respiratory epithelial cell | 1.24e-17 | 13 |
endodermal cell | 6.69e-16 | 58 |
epithelial cell | 1.34e-15 | 253 |
general ecto-epithelial cell | 1.92e-13 | 14 |
transitional epithelial cell | 2.05e-13 | 4 |
urothelial cell | 2.05e-13 | 4 |
acinar cell | 6.08e-11 | 5 |
epithelial cell of alimentary canal | 1.02e-10 | 20 |
bronchial epithelial cell | 3.86e-10 | 3 |
Showing 1 to 10 of 28 entries
Ontology term | p-value | n |
---|---|---|
urothelium | 9.99e-11 | 5 |
lower respiratory tract epithelium | 3.86e-10 | 3 |
epithelium of bronchus | 3.86e-10 | 3 |
transitional epithelium | 6.25e-09 | 6 |
endoderm-derived structure | 1.89e-08 | 160 |
endoderm | 1.89e-08 | 160 |
presumptive endoderm | 1.89e-08 | 160 |
skin gland | 6.07e-08 | 2 |
epidermis gland | 6.07e-08 | 2 |
gland of integumental system | 6.07e-08 | 2 |
Showing 1 to 10 of 20 entries
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.35e-07 | 14 |
Showing 1 to 1 of 1 entries