FFCP PHASE1:Hg19::chr5:63961948..63961959,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:63961948..63961959,-
|short_description=p@chr5:63961948..63961959,-
|description=CAGE_peak_at_chr5:63961948..63961959,-
|association_with_transcript=NA
|E...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:63961948..63961959,- | |||
|coexpression_cluster_id=C1896 | |||
|description=CAGE_peak_at_chr5:63961948..63961959,- | |||
|id=chr5:63961948..63961959,- | |||
|ontology_enrichment_celltype=CL:0002494!1.28e-30!16;CL:0000359!1.89e-14!32;CL:0002592!8.94e-14!3;CL:0002548!6.36e-12!6;CL:0000055!6.08e-11!180;CL:0000192!1.83e-10!42;CL:0000514!1.83e-10!42;CL:1000306!1.97e-10!4;CL:0002547!1.97e-10!4;CL:0000569!4.35e-10!4;CL:0000011!4.35e-10!4;CL:0002589!9.40e-10!2;CL:0000187!3.20e-09!54;CL:0002595!1.20e-08!5;CL:0000680!1.32e-08!57;CL:0000056!1.32e-08!57;CL:0000355!1.32e-08!57;CL:0000183!3.14e-08!59;CL:0000393!4.73e-08!60;CL:0000211!4.73e-08!60;CL:0000057!7.24e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002589;1.24e-15;2!CL:0000359;3.04e-13;32!CL:0002592;7.07e-11;3!CL:0002582;1.14e-10;3!CL:0000192;3.08e-10;43!CL:1000306;1.96e-08;4!CL:0002547;1.96e-08;4!CL:0002594;2.52e-08;4!CL:0002595;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002589,1.33e-15,2;CL:0000359,1.11e-14,32;CL:0000192,4.64e-11,43;CL:0000514,4.64e-11,43;CL:0002592,6.73e-11,3;CL:0002582,1.20e-10,3;CL:0000187,9.53e-09,55;CL:1000306,1.96e-08,4;CL:0002547,1.96e-08,4;CL:0002594,2.43e-08,4;CL:0000680,2.57e-08,58;CL:0000056,2.57e-08,58;CL:0000355,2.57e-08,58;CL:0000393,6.28e-08,61;CL:0000211,6.28e-08,61;CL:0002595,6.04e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;3.08e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000948!1.93e-27!24;UBERON:0005498!1.93e-27!24;UBERON:0004140!1.93e-27!24;UBERON:0009881!1.93e-27!24;UBERON:0004141!1.93e-27!24;UBERON:0003084!1.93e-27!24;UBERON:0007005!1.93e-27!24;UBERON:0004139!1.93e-27!24;UBERON:0004291!1.93e-27!24;UBERON:0007100!4.58e-24!27;UBERON:0004872!5.54e-24!84;UBERON:0003914!6.32e-22!118;UBERON:0001637!4.30e-20!42;UBERON:0003509!4.30e-20!42;UBERON:0004572!4.30e-20!42;UBERON:0004535!1.48e-18!110;UBERON:0001009!6.66e-18!113;UBERON:0004573!1.52e-16!33;UBERON:0004571!1.52e-16!33;UBERON:0003498!2.81e-14!5;UBERON:0005985!2.81e-14!5;UBERON:0001621!8.94e-14!3;UBERON:0001981!5.17e-13!60;UBERON:0007500!5.17e-13!60;UBERON:0004537!5.17e-13!60;UBERON:0006965!5.17e-13!60;UBERON:0000055!7.17e-11!69;UBERON:0000025!1.13e-10!194;UBERON:0000415!1.97e-10!4;UBERON:0007240!1.97e-10!4;UBERON:0005742!1.97e-10!4;UBERON:0005734!1.97e-10!4;UBERON:0004664!1.97e-10!4;UBERON:0004663!1.97e-10!4;UBERON:0001529!9.40e-10!2;UBERON:0007204!9.40e-10!2;UBERON:0002049!4.51e-09!79;UBERON:0007798!4.51e-09!79;UBERON:0003103!5.43e-09!69;UBERON:0003834!1.20e-08!5;UBERON:0001533!1.20e-08!5;UBERON:0001134!7.04e-08!61;UBERON:0002036!7.04e-08!61;UBERON:0003082!7.04e-08!61;UBERON:0002385!1.50e-07!63;UBERON:0001015!1.50e-07!63;UBERON:0000383!1.50e-07!63;UBERON:0004111!2.19e-07!241;UBERON:0003081!2.67e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001529;1.24e-15;2!UBERON:0007204;1.24e-15;2!UBERON:0001637;5.29e-13;42!UBERON:0003509;5.29e-13;42!UBERON:0004572;5.29e-13;42!UBERON:0004573;9.69e-12;33!UBERON:0004571;9.69e-12;33!UBERON:0003498;7.07e-11;3!UBERON:0005985;7.07e-11;3!UBERON:0001621;7.07e-11;3!UBERON:0007500;2.09e-09;56!UBERON:0001981;2.09e-09;56!UBERON:0004537;2.09e-09;56!UBERON:0004797;1.96e-08;4!UBERON:0000415;1.96e-08;4!UBERON:0007240;1.96e-08;4!UBERON:0005742;1.96e-08;4!UBERON:0005734;1.96e-08;4!UBERON:0004664;1.96e-08;4!UBERON:0004663;1.96e-08;4!UBERON:0001310;2.52e-08;4!UBERON:0002049;4.76e-07;75!UBERON:0007798;4.76e-07;75!UBERON:0003834;6.04e-07;5!UBERON:0001533;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,3.23e-17,42;UBERON:0003509,3.23e-17,42;UBERON:0004572,3.23e-17,42;UBERON:0001529,1.33e-15,2;UBERON:0007204,1.33e-15,2;UBERON:0004573,2.68e-14,33;UBERON:0004571,2.68e-14,33;UBERON:0007500,2.28e-12,59;UBERON:0001981,2.28e-12,59;UBERON:0004537,2.28e-12,59;UBERON:0006965,2.28e-12,59;UBERON:0001621,6.73e-11,3;UBERON:0000055,8.94e-11,68;UBERON:0002049,1.97e-09,78;UBERON:0007798,1.97e-09,78;UBERON:0004872,7.02e-09,83;UBERON:0000415,1.96e-08,4;UBERON:0007240,1.96e-08,4;UBERON:0005742,1.96e-08,4;UBERON:0005734,1.96e-08,4;UBERON:0004664,1.96e-08,4;UBERON:0004663,1.96e-08,4;UBERON:0001310,2.43e-08,4;UBERON:0001134,8.30e-08,62;UBERON:0002036,8.30e-08,62;UBERON:0003082,8.30e-08,62;UBERON:0002385,1.41e-07,64;UBERON:0001015,1.41e-07,64;UBERON:0000383,1.41e-07,64;UBERON:0003498,4.79e-07,5;UBERON:0005985,4.79e-07,5;UBERON:0003834,6.04e-07,5;UBERON:0001533,6.04e-07,5;UBERON:0002329,7.23e-07,71;UBERON:0003059,7.23e-07,71;UBERON:0007282,7.23e-07,71;UBERON:0004290,7.23e-07,71;UBERON:0009618,7.23e-07,71;UBERON:0004535,8.11e-07,109;UBERON:0003077,8.90e-07,72;UBERON:0007285,8.90e-07,72 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,6.62045904066094,0.286836620748814,0,0.560677600142307,0,0,0.622422070799533,0.538842688278752,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567160915800105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,1.03850885836724,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0.18532421910392,12.3087402598112,0,0,0,0,0,0,0,0,0,0,0.202182481573316,12.6808256938407,0.421258456238981,0,0.487426979262569,0,0,0,0,0,0.66343897524122,2.63070531152258,0,0,1.21746226177622,0,0,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0.228840068396924,0.604923695052956,0.15543720058278,0,0,0,0,0,0,0,0.150257608997218,3.42724690951916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,6.62045904066094,0.286836620748814,0,0.560677600142307,0,0,0.622422070799533,0.538842688278752,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567160915800105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,1.03850885836724,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0.18532421910392,12.3087402598112,0,0,0,0,0,0,0,0,0,0,0.202182481573316,12.6808256938407,0.421258456238981,0,0.487426979262569,0,0,0,0,0,0.66343897524122,2.63070531152258,0,0,1.21746226177622,0,0,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0.228840068396924,0.604923695052956,0.15543720058278,0,0,0,0,0,0,0,0.150257608997218,3.42724690951916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:63961948..63961959,- | |||
}} | }} |
Latest revision as of 15:42, 30 July 2015
Short description: | p@chr5:63961948..63961959, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:63961948..63961959, - |
Coexpression cluster: | C1896_Smooth_mesenchymal_heart_tongue_left_Fibroblast_Endothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brachiocephalic vasculature | 1.33e-15 | 2 |
vascular associated smooth muscle cell | 1.11e-14 | 32 |
smooth muscle cell | 4.64e-11 | 43 |
smooth muscle myoblast | 4.64e-11 | 43 |
smooth muscle cell of the coronary artery | 6.73e-11 | 3 |
visceral preadipocyte | 1.20e-10 | 3 |
muscle cell | 9.53e-09 | 55 |
fibroblast of tunica adventitia of artery | 1.96e-08 | 4 |
fibroblast of the aortic adventitia | 1.96e-08 | 4 |
smooth muscle cell of the umbilical artery | 2.43e-08 | 4 |
muscle precursor cell | 2.57e-08 | 58 |
myoblast | 2.57e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.57e-08 | 58 |
electrically responsive cell | 6.28e-08 | 61 |
electrically active cell | 6.28e-08 | 61 |
smooth muscle cell of the subclavian artery | 6.04e-07 | 5 |