FFCP PHASE1:Hg19::chr6:114292284..114292359,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:114292284..114292359,-
|short_description=p1@HDAC2
|description=CAGE_peak_1_at_HDAC2_5end
|association_with_transcript=0bp_to_ENST00000368632,ENST000003982...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3066 | |EntrezGene=3066 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4853 | |HGNC=4853 | ||
|TSSclassifier=strong | |||
|UniProt=Q92769,E5RFI6,E5RFP9,E5RK19 | |UniProt=Q92769,E5RFI6,E5RFP9,E5RK19 | ||
|association_with_transcript=0bp_to_ENST00000368632,ENST00000398283,ENST00000520170,ENST00000520895,ENST00000521163,ENST00000521233,ENST00000524334,NM_001527,NR_033441,uc003pwd.1,uc003pwe.1_5end | |||
|cluster_id=chr6:114292284..114292359,- | |||
|description=CAGE_peak_1_at_HDAC2_5end | |||
|id=chr6:114292284..114292359,- | |||
|ontology_enrichment_celltype=CL:0000066!1.26e-09!254;CL:0002319!3.00e-08!25;CL:0000133!3.37e-08!59;CL:0002321!3.57e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.95e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.17e-09,253;CL:0002319,3.00e-08,25;CL:0000133,3.37e-08,59;CL:0002321,5.81e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.76e-44!235;DOID:14566!4.60e-43!239;DOID:0050687!1.38e-23!143;DOID:0050686!4.79e-21!137;DOID:305!6.64e-16!106;DOID:2531!6.23e-12!51;DOID:0060083!6.23e-12!51;DOID:1240!1.01e-11!39;DOID:8692!3.61e-10!31;DOID:3095!1.76e-09!22;DOID:2994!1.76e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:8692;7.77e-10;31!DOID:1240;1.22e-09;39!DOID:3095;1.86e-09;22!DOID:2994;1.86e-09;22!DOID:2531;2.19e-07;51!DOID:0060083;2.19e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.76e-44,235;DOID:14566,4.60e-43,239;DOID:0050687,1.38e-23,143;DOID:0050686,4.79e-21,137;DOID:305,6.64e-16,106;DOID:2531,6.23e-12,51;DOID:0060083,6.23e-12,51;DOID:1240,1.01e-11,39;DOID:8692,3.61e-10,31;DOID:3095,1.76e-09,22;DOID:2994,1.76e-09,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.63e-07;49 | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@HDAC2 | |||
}} | }} |
Latest revision as of 23:58, 19 September 2015
Short description: | p1@HDAC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HDAC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000368632, ENST00000398283, ENST00000520170, ENST00000520895, ENST00000521163, ENST00000521233, ENST00000524334, NM_001527, NR_033441, uc003pwd.1, uc003pwe.1_5end |
EntrezGene: | HDAC2 |
HGNC: | 4853 |
UniProt: | Q92769E5RFI6E5RFP9E5RK19 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.17e-09 | 253 |
neural cell | 3.00e-08 | 25 |
neurectodermal cell | 3.37e-08 | 59 |
embryonic cell | 5.81e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.76e-44 | 235 |
disease of cellular proliferation | 4.60e-43 | 239 |
cell type cancer | 1.38e-23 | 143 |
organ system cancer | 4.79e-21 | 137 |
carcinoma | 6.64e-16 | 106 |
hematologic cancer | 6.23e-12 | 51 |
immune system cancer | 6.23e-12 | 51 |
leukemia | 1.01e-11 | 39 |
myeloid leukemia | 3.61e-10 | 31 |
germ cell and embryonal cancer | 1.76e-09 | 22 |
germ cell cancer | 1.76e-09 | 22 |