NonredundantMotifs:118: Difference between revisions
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{{Known_motif | {{Known_motif | ||
|PWM=PO;A;C;G;T!1;42.557138;1.724301;138.766552;0.892626!2;24.987809;140.968461;2.58498;15.399367!3;160.797641;0.914276;7.614839;14.613861!4;18.009781;2.680297;3.733417;159.517122!5;152.060941;8.213805;5.302818;18.363053!6;169.240198;3.726728;7.36561;3.608081!7;60.855464;2.810537;0.939475;119.335141!8;7.981627;0;0;175.95899!9;18.153798;17.484917;5.424454;142.877448!10;182.153249;0.854631;0;0.932737!11;1.827409;5.598665;7.345752;169.168791 | |PWM=PO;A;C;G;T!1;42.557138;1.724301;138.766552;0.892626!2;24.987809;140.968461;2.58498;15.399367!3;160.797641;0.914276;7.614839;14.613861!4;18.009781;2.680297;3.733417;159.517122!5;152.060941;8.213805;5.302818;18.363053!6;169.240198;3.726728;7.36561;3.608081!7;60.855464;2.810537;0.939475;119.335141!8;7.981627;0;0;175.95899!9;18.153798;17.484917;5.424454;142.877448!10;182.153249;0.854631;0;0.932737!11;1.827409;5.598665;7.345752;169.168791 | ||
|entrez_gene_id= | |entrez_gene_id=5463 | ||
|motif_cluster_2013_march_motif_members= /SWISSREGULON:POU6F1. | |motif_cluster_2013_march_motif_members= /HOCOMOCO:PO6F1_f1 /SWISSREGULON:POU6F1.p2 | ||
|name= | |name=non-redundant118 | ||
|representative_motif_db=SWISSREGULON | |representative_motif_db=SWISSREGULON | ||
|representative_motif_id=POU6F1.p2 | |representative_motif_id=POU6F1.p2 | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 15:48, 31 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant118
- db :SWISSREGULON
- Id :POU6F1.p2
- name :POU6F1
- score :0.03323062020154045
- External refs:
- Internal refs:
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Sub Motif Members
