FFCP PHASE1:Hg19::chr6:13711773..13711796,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:13711773..13711796,-
|short_description=p3@RANBP9
|description=CAGE_peak_3_at_RANBP9_5end
|association_with_transcript=0bp_to_ENST00000011619,NM_005493,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10048 | |EntrezGene=10048 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13727 | |HGNC=13727 | ||
|TSSclassifier=strong | |||
|UniProt=Q96S59 | |UniProt=Q96S59 | ||
|association_with_transcript=0bp_to_ENST00000011619,NM_005493,uc003nbb.2_5end | |||
|cluster_id=chr6:13711773..13711796,- | |||
|description=CAGE_peak_3_at_RANBP9_5end | |||
|id=chr6:13711773..13711796,- | |||
|ontology_enrichment_celltype=CL:0000037!6.72e-21!172;CL:0000566!6.72e-21!172;CL:0002032!3.96e-20!165;CL:0000837!3.96e-20!165;CL:0000988!5.45e-19!182;CL:0000763!2.71e-18!112;CL:0000049!2.71e-18!112;CL:0000738!1.74e-17!140;CL:0000134!2.08e-16!358;CL:0002320!1.38e-15!365;CL:0000766!2.36e-15!76;CL:0002087!2.40e-13!119;CL:0002031!3.75e-13!124;CL:0000557!2.67e-12!71;CL:0002009!3.61e-11!65;CL:0002194!9.92e-11!63;CL:0000576!9.92e-11!63;CL:0000040!9.92e-11!63;CL:0000559!9.92e-11!63;CL:0000839!1.41e-10!70;CL:0000219!1.56e-10!390;CL:0000048!1.61e-10!430;CL:0000723!4.02e-10!436;CL:0000034!1.14e-09!444;CL:0002057!1.58e-08!42;CL:0000860!1.61e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.06e-08;33!CL:0002057;2.06e-08;33!CL:0000473;2.76e-08;39!CL:0000234;2.76e-08;39!CL:0000094;6.04e-07;8!CL:0000576;7.76e-07;48!CL:0000763;8.26e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.94e-21,168;CL:0002032,7.13e-21,161;CL:0000837,7.13e-21,161;CL:0000988,1.49e-19,177;CL:0000763,1.97e-19,108;CL:0000049,1.97e-19,108;CL:0000134,2.87e-18,354;CL:0000738,1.06e-17,136;CL:0002320,1.66e-17,361;CL:0000766,3.01e-16,72;CL:0002087,1.29e-13,115;CL:0002031,2.16e-13,120;CL:0000557,5.26e-13,67;CL:0000219,3.28e-12,386;CL:0002009,8.49e-12,61;CL:0000048,1.34e-11,427;CL:0002194,2.44e-11,59;CL:0000576,2.44e-11,59;CL:0000040,2.44e-11,59;CL:0000559,2.44e-11,59;CL:0000839,3.49e-11,66;CL:0000723,4.72e-11,433;CL:0000034,1.13e-10,441;CL:0000473,1.34e-09,48;CL:0000234,1.34e-09,48;CL:0000860,9.40e-09,42;CL:0002057,9.40e-09,42;CL:0000094,8.97e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.63e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.62e-15!375;UBERON:0002390!3.22e-12!102;UBERON:0003061!3.22e-12!102;UBERON:0002371!5.23e-11!80;UBERON:0002193!1.28e-10!112;UBERON:0001474!6.63e-10!86;UBERON:0004765!2.14e-09!101;UBERON:0001434!2.14e-09!101;UBERON:0002405!3.56e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.22e-17,371;UBERON:0002390,8.47e-13,98;UBERON:0003061,8.47e-13,98;UBERON:0002371,1.18e-11,76;UBERON:0002193,9.11e-11,108;UBERON:0001474,1.71e-10,82;UBERON:0002405,1.25e-09,93;UBERON:0001434,2.37e-09,100;UBERON:0004765,4.88e-09,90 | |||
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| ||
|short_description=p3@RANBP9 | |||
}} | }} |
Latest revision as of 01:20, 25 September 2015
Short description: | p3@RANBP9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RANBP9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000011619, NM_005493, uc003nbb.2_5end |
EntrezGene: | RANBP9 |
HGNC: | 13727 |
UniProt: | Q96S59 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.94e-21 | 168 |
hematopoietic oligopotent progenitor cell | 7.13e-21 | 161 |
hematopoietic multipotent progenitor cell | 7.13e-21 | 161 |
hematopoietic cell | 1.49e-19 | 177 |
myeloid cell | 1.97e-19 | 108 |
common myeloid progenitor | 1.97e-19 | 108 |
mesenchymal cell | 2.87e-18 | 354 |
leukocyte | 1.06e-17 | 136 |
connective tissue cell | 1.66e-17 | 361 |
myeloid leukocyte | 3.01e-16 | 72 |
nongranular leukocyte | 1.29e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 2.16e-13 | 120 |
granulocyte monocyte progenitor cell | 5.26e-13 | 67 |
motile cell | 3.28e-12 | 386 |
macrophage dendritic cell progenitor | 8.49e-12 | 61 |
multi fate stem cell | 1.34e-11 | 427 |
monopoietic cell | 2.44e-11 | 59 |
monocyte | 2.44e-11 | 59 |
monoblast | 2.44e-11 | 59 |
promonocyte | 2.44e-11 | 59 |
myeloid lineage restricted progenitor cell | 3.49e-11 | 66 |
somatic stem cell | 4.72e-11 | 433 |
stem cell | 1.13e-10 | 441 |
defensive cell | 1.34e-09 | 48 |
phagocyte | 1.34e-09 | 48 |
classical monocyte | 9.40e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.40e-09 | 42 |
granulocyte | 8.97e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.22e-17 | 371 |
hematopoietic system | 8.47e-13 | 98 |
blood island | 8.47e-13 | 98 |
bone marrow | 1.18e-11 | 76 |
hemolymphoid system | 9.11e-11 | 108 |
bone element | 1.71e-10 | 82 |
immune system | 1.25e-09 | 93 |
skeletal system | 2.37e-09 | 100 |
skeletal element | 4.88e-09 | 90 |