FFCP PHASE1:Hg19::chr6:44187060..44187085,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:44187060..44187085,+
|short_description=p8@SLC29A1
|description=CAGE_peak_8_at_SLC29A1_5end
|association_with_transcript=-156bp_to_ENST00000393844,ENST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2030 | |EntrezGene=2030 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11003 | |HGNC=11003 | ||
|TSSclassifier=strong | |||
|UniProt=Q99808,F5GX17 | |UniProt=Q99808,F5GX17 | ||
|association_with_transcript=-156bp_to_ENST00000393844,ENST00000544345,NM_001078174,NM_004955,uc003owu.1,uc003owv.1,uc003oww.1,uc011dvp.1_5end | |||
|cluster_id=chr6:44187060..44187085,+ | |||
|description=CAGE_peak_8_at_SLC29A1_5end | |||
|id=chr6:44187060..44187085,+ | |||
|ontology_enrichment_celltype=CL:0000039!5.26e-08!7;CL:0000586!5.26e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;7.54e-27;7!CL:0000586;7.54e-27;7!CL:0000123;3.77e-11;2!CL:0000242;3.77e-11;2!CL:0000136;6.45e-10;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.96e-27,7;CL:0000586,6.96e-27,7;CL:0000242,2.85e-11,2;CL:0000136,1.26e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!6.67e-07!22;DOID:2994!6.67e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;9.94e-18;22!DOID:2994;9.94e-18;22!DOID:1799;8.33e-07;1!DOID:10165;8.33e-07;1!DOID:1798;8.33e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.06e-17,22;DOID:2994,1.06e-17,22;DOID:0050687,1.15e-08,143;DOID:1799,8.34e-07,1;DOID:10165,8.34e-07,1;DOID:1798,8.34e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.74e-07;3!UBERON:0000946;1.74e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,9.55e-08,3;UBERON:0009751,9.55e-08,3;UBERON:0000946,9.55e-08,3;UBERON:0002523,9.55e-08,3;UBERON:0005983,9.55e-08,3;UBERON:0002165,9.55e-08,3;UBERON:0002062,9.55e-08,3;UBERON:0007280,9.55e-08,3 | |||
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| ||
|short_description=p8@SLC29A1 | |||
}} | }} |
Latest revision as of 23:42, 18 September 2015
Short description: | p8@SLC29A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SLC29A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -156bp_to_ENST00000393844, ENST00000544345, NM_001078174, NM_004955, uc003owu.1, uc003owv.1, uc003oww.1, uc011dvp.1_5end |
EntrezGene: | SLC29A1 |
HGNC: | 11003 |
UniProt: | Q99808F5GX17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.96e-27 | 7 |
germ cell | 6.96e-27 | 7 |
Merkel cell | 2.85e-11 | 2 |
fat cell | 1.26e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
valve | 9.55e-08 | 3 |
cardiac mesenchyme | 9.55e-08 | 3 |
cardial valve | 9.55e-08 | 3 |
tunica intima | 9.55e-08 | 3 |
heart layer | 9.55e-08 | 3 |
endocardium | 9.55e-08 | 3 |
endocardial cushion | 9.55e-08 | 3 |
presumptive endocardium | 9.55e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.06e-17 | 22 |
germ cell cancer | 1.06e-17 | 22 |
cell type cancer | 1.15e-08 | 143 |
islet cell tumor | 8.34e-07 | 1 |
endocrine pancreas cancer | 8.34e-07 | 1 |
pancreatic endocrine carcinoma | 8.34e-07 | 1 |