FFCP PHASE1:Hg19::chr6:74171674..74171690,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:74171674..74171690,+
|short_description=p3@MTO1
|description=CAGE_peak_3_at_MTO1_5end
|association_with_transcript=-116bp_to_uc003phc.1_5end
|EntrezGene=2...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25821 | |EntrezGene=25821 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19261 | |HGNC=19261 | ||
|TSSclassifier=strong | |||
|UniProt=A2A6U7 | |UniProt=A2A6U7 | ||
|association_with_transcript=-116bp_to_uc003phc.1_5end | |||
|cluster_id=chr6:74171674..74171690,+ | |||
|description=CAGE_peak_3_at_MTO1_5end | |||
|id=chr6:74171674..74171690,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.03e-28!172;CL:0000566!3.03e-28!172;CL:0000988!6.81e-26!182;CL:0002032!4.73e-25!165;CL:0000837!4.73e-25!165;CL:0000542!2.96e-17!53;CL:0000051!2.96e-17!53;CL:0000838!9.95e-17!52;CL:0002087!1.61e-16!119;CL:0000738!3.44e-16!140;CL:0002031!7.42e-16!124;CL:0000084!1.46e-11!25;CL:0000827!1.46e-11!25;CL:0000134!1.67e-11!358;CL:0002320!1.97e-10!365;CL:0000763!6.43e-10!112;CL:0000049!6.43e-10!112;CL:0000219!5.33e-08!390;CL:0000791!1.10e-07!18;CL:0000789!1.10e-07!18;CL:0002420!1.10e-07!18;CL:0002419!1.10e-07!18;CL:0000790!1.10e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.71e-19;25!CL:0000542;3.00e-15;53!CL:0000791;7.36e-12;18!CL:0000789;7.36e-12;18!CL:0002419;7.36e-12;18!CL:0000624;4.88e-08;6!CL:0000988;1.46e-07;177!CL:0002087;2.03e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.49e-38,168;CL:0000988,2.89e-37,177;CL:0002032,1.71e-33,161;CL:0000837,1.71e-33,161;CL:0000542,8.75e-25,53;CL:0000051,8.75e-25,53;CL:0000838,8.57e-24,52;CL:0000084,1.49e-19,25;CL:0000827,1.49e-19,25;CL:0002087,1.84e-19,115;CL:0000738,6.60e-19,136;CL:0002031,7.36e-16,120;CL:0000134,1.78e-12,354;CL:0000763,7.15e-12,108;CL:0000049,7.15e-12,108;CL:0000791,7.48e-12,18;CL:0000789,7.48e-12,18;CL:0002420,7.48e-12,18;CL:0002419,7.48e-12,18;CL:0000790,7.48e-12,18;CL:0002320,1.02e-11,361;CL:0000219,4.02e-09,386;CL:0000624,6.12e-08,6;CL:0000034,9.97e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000051;3.00e-15;53!CL:0000790;7.36e-12;18 | |||
|ontology_enrichment_disease=DOID:2531!1.16e-21!51;DOID:0060083!1.16e-21!51;DOID:1240!2.22e-19!39;DOID:8692!1.77e-14!31;DOID:0050686!5.47e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:1240;4.77e-27;39!DOID:8692;1.52e-24;31!DOID:2531;2.90e-24;51!DOID:0060083;2.90e-24;51!DOID:0060058;6.91e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.04e-41,51;DOID:0060083,1.04e-41,51;DOID:1240,9.12e-36,39;DOID:8692,8.34e-26,31;DOID:0060058,6.79e-12,10;DOID:0050686,3.47e-10,137 | |||
|ontology_enrichment_uberon=UBERON:0002384!9.50e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.22e-11,371 | |||
|phase1_expression=1.09007027562334,0,0.845726424575827,0,0.446961094427288,2.61701557230111,0,1.26343974685366,0,0.245733936501509,0,0,0,0.247532705920093,0.331397375727916,0,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0,0.136874425072884,0.125542639594803,0.534893840235659,0.492603536699674,0.472264687882075,1.57345710739562,3.0706351847777,0.309632246632152,0,0.6024118375565,0,1.47187681102573,7.39280008934592,17.9096267994257,1.66198622559563,1.60435557976113,1.95309783644267,0,0,0.257575567634187,0.872389432677388,0.755751887377619,0.727752183563449,0.929716147622738,0,0.619412741790207,1.43846196161075,1.5369642391746,2.12834006899727,0.689491361473237,1.29096936716765,0,1.88242339542605,0.545812300115692,0.898893937780338,0.306083892370903,0,1.27867425159808,0.659702600373432,0.797854630486527,2.98357325372886,0,0.56738522469114,0,0.251248665256743,3.12889751052121,1.08594422352558,0.605399502633369,0.368277635987565,0.949387162322653,0.633765858935825,0.212604299965044,1.04829322754188,0.44931452458598,0.150176892841506,0.32145117339416,0.285012743741249,0.99458338599545,0.547992461293902,1.75996244461323,0,0.889509253863555,1.28019066769952,0.400395987036012,1.14950487990897,0,0.954053754535364,1.1384259382189,0.587237189370939,1.91136614062614,7.93027971474155,15.694239763483,9.2184429671277,3.14735632182133,3.93010762749165,6.37364646898479,0.334372990781356,1.30368906653436,1.4203434172042,3.89653456815823,6.35039604245489,2.06224135232386,3.32300841875432,0.812411591295047,2.30564375506215,1.8208308658383,2.79544437826249,2.76350017785848,3.47763702882063,0.296573126324121,1.60524496853828,2.09071047609954,2.37949619664889,4.21542542962113,1.37450978193052,4.80737414837055,0.318565414324097,3.25541726928209,1.90090408889675,0.752875595388864,1.15187950038977,0,1.4206635122641,0.821127996921047,6.24980903996671,10.1627274397733,6.80674698249155,0,0,0.255725123687061,0,0.50133791063589,0.434539556882471,1.5905718941022,1.45990461090791,0.0945348171640679,0.221729397462564,0.087834785693126,0.458426764241994,0,0,0,0,0,0.715471872916026,1.71598473234038,0.74291500265913,0.198762407366705,0,0.347140501607594,0,0,0,0.208994966536811,0.258416759169329,0,0,0.402829317109147,0,0,0.367663080345869,0,0,0.22452937262617,0.225222960966644,0,0,0,1.31780417436063,0,0,0,0.886413581652058,0.662045904066094,0,0.354668382198357,0,1.06748995729705,0.49333509683432,0.311211035399766,0.942974704487816,0.163461903113459,0.151357427644931,0,0.234321431833797,0.312160076830321,0.570471821544449,0.298897361103602,0.23486899728753,0.323745888736263,0.140450806702248,0,0.122834317311768,0.309977343527296,0,0.494533858557114,0,0,0,0,0.277064115484183,0,0,0,0.226864366320042,0.538168907066586,0.85422955527427,0.211931901159562,0.600182192168805,0.206105058476878,0.772921620136887,0.37223371266318,0.675105328965065,0.389748020644795,1.51460264546469,0.552299391853796,0,0.710019185033229,0.705264687593482,0.508681776931463,0,0,0,0.365921118388786,0.927708378250397,0.464775771478074,0.310983165046111,0.252320850875628,0.72995471815166,0,0,0,0.464367928031979,0,0.709840800239063,1.51726221070292,1.44606617930089,0.441175890929576,1.08939722046203,0.71181185733329,0.539325232640658,0.784885860501384,0.38474715694639,0,0,0,0,1.26755034821831,0,1.18157981336281,9.71218818712231,0.245976877086227,0.343135620597051,0.219500570817251,0,0,0.0925884451585296,0,0,0,0,0.234817388471643,0,0.462985512576611,0,0,0.858486162094873,0.246217006087397,0,0,0.93733833986777,0.335964256397719,0.425325291727159,0.716468181622786,0.290633938513962,0,0.492663237895943,0.352193736052904,1.24396869324463,0.576479813667846,0.50496973370552,0.063497894292169,0,0,0,0,0,0,0,0,0.2933531432838,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.434343920002738,0,0.537182889719687,10.6480886793851,7.29013812747131,7.11570997036407,7.31555306794566,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0.356857977594324,0.473107245101804,0,0.601892199455438,0,0,0,0,0.347534457872331,0,0,1.6541442089831,2.37285620900479,2.45473382947922,0,0,0.30239029332968,0.992431231275107,0.61384789315225,0.841980283299221,0.384417447767103,1.53512174720011,0.804269605718038,0,0,0.532685175939381,0.492762936082855,0,0.232420756919918,0.241718899183244,0,0.460404944679482,0.459257792658427,0.364182336013434,0.131124414959424,0,0.15403067420883,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.438519753291869,1.3071772551245,0,0,0,0.824328093181778,0.27470839445503,0.577566499444116,0,0,0,0.096670718292122,0.308097234229289,0,0,0.322260734604821,0,0.0852266274161009,0,0,0,0.255225424989168,0.10115778085555,0.464845549297286,0.62962469366128,0,0,0,0,0,0.572499546967965,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.353437207037059,0.404364963146632,0,0,0,0.731140468893853,0,0.545999645631943,0.282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|phase1_expression=1.09007027562334,0,0.845726424575827,0,0.446961094427288,2.61701557230111,0,1.26343974685366,0,0.245733936501509,0,0,0,0.247532705920093,0.331397375727916,0,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0,0.136874425072884,0.125542639594803,0.534893840235659,0.492603536699674,0.472264687882075,1.57345710739562,3.0706351847777,0.309632246632152,0,0.6024118375565,0,1.47187681102573,7.39280008934592,17.9096267994257,1.66198622559563,1.60435557976113,1.95309783644267,0,0,0.257575567634187,0.872389432677388,0.755751887377619,0.727752183563449,0.929716147622738,0,0.619412741790207,1.43846196161075,1.5369642391746,2.12834006899727,0.689491361473237,1.29096936716765,0,1.88242339542605,0.545812300115692,0.898893937780338,0.306083892370903,0,1.27867425159808,0.659702600373432,0.797854630486527,2.98357325372886,0,0.56738522469114,0,0.251248665256743,3.12889751052121,1.08594422352558,0.605399502633369,0.368277635987565,0.949387162322653,0.633765858935825,0.212604299965044,1.04829322754188,0.44931452458598,0.150176892841506,0.32145117339416,0.285012743741249,0.99458338599545,0.547992461293902,1.75996244461323,0,0.889509253863555,1.28019066769952,0.400395987036012,1.14950487990897,0,0.954053754535364,1.1384259382189,0.587237189370939,1.91136614062614,7.93027971474155,15.694239763483,9.2184429671277,3.14735632182133,3.93010762749165,6.37364646898479,0.334372990781356,1.30368906653436,1.4203434172042,3.89653456815823,6.35039604245489,2.06224135232386,3.32300841875432,0.812411591295047,2.30564375506215,1.8208308658383,2.79544437826249,2.76350017785848,3.47763702882063,0.296573126324121,1.60524496853828,2.09071047609954,2.37949619664889,4.21542542962113,1.37450978193052,4.80737414837055,0.318565414324097,3.25541726928209,1.90090408889675,0.752875595388864,1.15187950038977,0,1.4206635122641,0.821127996921047,6.24980903996671,10.1627274397733,6.80674698249155,0,0,0.255725123687061,0,0.50133791063589,0.434539556882471,1.5905718941022,1.45990461090791,0.0945348171640679,0.221729397462564,0.087834785693126,0.458426764241994,0,0,0,0,0,0.715471872916026,1.71598473234038,0.74291500265913,0.198762407366705,0,0.347140501607594,0,0,0,0.208994966536811,0.258416759169329,0,0,0.402829317109147,0,0,0.367663080345869,0,0,0.22452937262617,0.225222960966644,0,0,0,1.31780417436063,0,0,0,0.886413581652058,0.662045904066094,0,0.354668382198357,0,1.06748995729705,0.49333509683432,0.311211035399766,0.942974704487816,0.163461903113459,0.151357427644931,0,0.234321431833797,0.312160076830321,0.570471821544449,0.298897361103602,0.23486899728753,0.323745888736263,0.140450806702248,0,0.122834317311768,0.309977343527296,0,0.494533858557114,0,0,0,0,0.277064115484183,0,0,0,0.226864366320042,0.538168907066586,0.85422955527427,0.211931901159562,0.600182192168805,0.206105058476878,0.772921620136887,0.37223371266318,0.675105328965065,0.389748020644795,1.51460264546469,0.552299391853796,0,0.710019185033229,0.705264687593482,0.508681776931463,0,0,0,0.365921118388786,0.927708378250397,0.464775771478074,0.310983165046111,0.252320850875628,0.72995471815166,0,0,0,0.464367928031979,0,0.709840800239063,1.51726221070292,1.44606617930089,0.441175890929576,1.08939722046203,0.71181185733329,0.539325232640658,0.784885860501384,0.38474715694639,0,0,0,0,1.26755034821831,0,1.18157981336281,9.71218818712231,0.245976877086227,0.343135620597051,0.219500570817251,0,0,0.0925884451585296,0,0,0,0,0.234817388471643,0,0.462985512576611,0,0,0.858486162094873,0.246217006087397,0,0,0.93733833986777,0.335964256397719,0.425325291727159,0.716468181622786,0.290633938513962,0,0.492663237895943,0.352193736052904,1.24396869324463,0.576479813667846,0.50496973370552,0.063497894292169,0,0,0,0,0,0,0,0,0.2933531432838,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.434343920002738,0,0.537182889719687,10.6480886793851,7.29013812747131,7.11570997036407,7.31555306794566,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0.356857977594324,0.473107245101804,0,0.601892199455438,0,0,0,0,0.347534457872331,0,0,1.6541442089831,2.37285620900479,2.45473382947922,0,0,0.30239029332968,0.992431231275107,0.61384789315225,0.841980283299221,0.384417447767103,1.53512174720011,0.804269605718038,0,0,0.532685175939381,0.492762936082855,0,0.232420756919918,0.241718899183244,0,0.460404944679482,0.459257792658427,0.364182336013434,0.131124414959424,0,0.15403067420883,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.438519753291869,1.3071772551245,0,0,0,0.824328093181778,0.27470839445503,0.577566499444116,0,0,0,0.096670718292122,0.308097234229289,0,0,0.322260734604821,0,0.0852266274161009,0,0,0,0.255225424989168,0.10115778085555,0.464845549297286,0.62962469366128,0,0,0,0,0,0.572499546967965,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.353437207037059,0.404364963146632,0,0,0,0.731140468893853,0,0.545999645631943,0.282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| ||
|short_description=p3@MTO1 | |||
}} | }} |
Latest revision as of 18:09, 19 September 2015
Short description: | p3@MTO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MTO1_5end |
Coexpression cluster: | NA |
Association with transcript: | -116bp_to_uc003phc.1_5end |
EntrezGene: | MTO1 |
HGNC: | 19261 |
UniProt: | A2A6U7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.49e-38 | 168 |
hematopoietic cell | 2.89e-37 | 177 |
hematopoietic oligopotent progenitor cell | 1.71e-33 | 161 |
hematopoietic multipotent progenitor cell | 1.71e-33 | 161 |
lymphocyte | 8.75e-25 | 53 |
common lymphoid progenitor | 8.75e-25 | 53 |
lymphoid lineage restricted progenitor cell | 8.57e-24 | 52 |
T cell | 1.49e-19 | 25 |
pro-T cell | 1.49e-19 | 25 |
nongranular leukocyte | 1.84e-19 | 115 |
leukocyte | 6.60e-19 | 136 |
hematopoietic lineage restricted progenitor cell | 7.36e-16 | 120 |
mesenchymal cell | 1.78e-12 | 354 |
myeloid cell | 7.15e-12 | 108 |
common myeloid progenitor | 7.15e-12 | 108 |
mature alpha-beta T cell | 7.48e-12 | 18 |
alpha-beta T cell | 7.48e-12 | 18 |
immature T cell | 7.48e-12 | 18 |
mature T cell | 7.48e-12 | 18 |
immature alpha-beta T cell | 7.48e-12 | 18 |
connective tissue cell | 1.02e-11 | 361 |
motile cell | 4.02e-09 | 386 |
CD4-positive, alpha-beta T cell | 6.12e-08 | 6 |
stem cell | 9.97e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.22e-11 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.04e-41 | 51 |
immune system cancer | 1.04e-41 | 51 |
leukemia | 9.12e-36 | 39 |
myeloid leukemia | 8.34e-26 | 31 |
lymphoma | 6.79e-12 | 10 |
organ system cancer | 3.47e-10 | 137 |