FFCP PHASE1:Hg19::chr6:74847986..74848013,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:74847986..74848013,+
|short_description=p@chr6:74847986..74848013,+
|description=CAGE_peak_at_chr6:74847986..74848013,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:74847986..74848013,+ | |||
|coexpression_cluster_id=C4625 | |||
|description=CAGE_peak_at_chr6:74847986..74848013,+ | |||
|id=chr6:74847986..74848013,+ | |||
|ontology_enrichment_celltype=CL:0005020!1.66e-09!6;CL:0002138!1.66e-09!6;CL:0005022!1.66e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0002138;2.56e-21;6!CL:0002139;1.72e-12;24!CL:0002144;6.21e-11;3!CL:0002579;1.02e-10;3!CL:0002541;6.02e-10;3!CL:0002580;6.02e-10;3!CL:0002334;4.03e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,2.63e-21,6;CL:0002138,2.63e-21,6;CL:0005022,2.63e-21,6;CL:0002139,1.57e-12,24;CL:0002144,7.23e-11,3;CL:0002579,1.14e-10,3;CL:0002580,5.16e-10,3;CL:0002541,5.33e-10,3;CL:0002334,3.95e-09,12;CL:0000115,1.21e-07,36;CL:0002078,5.70e-07,45 | |||
|ontology_enrichment_development_v019=CL:0005022;2.56e-21;6 | |||
|ontology_enrichment_disease=DOID:193!3.42e-10!29;DOID:120!8.29e-09!27;DOID:2394!2.30e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002323!1.48e-11!46;UBERON:0004458!2.37e-10!49;UBERON:0005156!3.40e-08!59;UBERON:0000990!3.40e-08!59;UBERON:0000991!8.23e-08!21;UBERON:0009196!8.23e-08!21;UBERON:0009117!8.23e-08!21;UBERON:0005564!8.23e-08!21;UBERON:0003886!1.00e-07!63;UBERON:0004176!2.76e-07!22;UBERON:0002553!6.43e-07!70;UBERON:0001473!9.44e-07!8;UBERON:0004536!9.44e-07!8;UBERON:0006558!9.44e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;8.75e-16;8!UBERON:0004536;8.75e-16;8!UBERON:0006558;8.75e-16;8!UBERON:0002465;1.84e-12;10!UBERON:0010523;6.21e-11;3!UBERON:0001915;6.21e-11;3!UBERON:0001982;6.21e-11;3!UBERON:0003124;6.02e-10;3!UBERON:0000920;6.02e-10;3!UBERON:0003688;4.56e-09;6!UBERON:0002358;4.56e-09;6!UBERON:0003684;4.56e-09;6!UBERON:0001178;4.56e-09;6!UBERON:0001443;9.50e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,8.90e-16,8;UBERON:0004536,8.90e-16,8;UBERON:0006558,8.90e-16,8;UBERON:0002465,1.87e-12,10;UBERON:0010523,7.23e-11,3;UBERON:0001915,7.23e-11,3;UBERON:0001982,7.23e-11,3;UBERON:0000920,5.33e-10,3;UBERON:0003688,4.52e-09,6;UBERON:0002358,4.52e-09,6;UBERON:0003684,4.52e-09,6;UBERON:0001178,4.52e-09,6;UBERON:0002323,5.59e-09,46;UBERON:0004458,2.96e-08,49;UBERON:0003886,3.11e-07,54;UBERON:0002553,3.79e-07,61;UBERON:0001443,8.24e-07,11 | |||
|phase1_expression=1.2717486548939,0,2.96004248601539,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02290049474824,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8535038851118,22.7690408119495,63.2621958125227,4.02829317109147,13.6848979029332,2.19655851793353,0,0,1.69669483739752,0.44905874525234,0.450445921933289,0,0,0,0,0,0,0.993943903390637,0.25326102332916,0.397227542439656,0.573673241497627,0,0,0,0,0,0,0,0,0,1.40592859100278,0,0,0,0,0,0,0,0,0.103325781175765,0,0.989067717114227,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0,0,0.85422955527427,0.423863802319124,0,0.206105058476878,2.83404594050192,1.48893485065272,0,0.584622030967192,0,0.644349290496095,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0.325808305310325,0,0,0,0,13.1373467462577,6.01881166349594,18.8351610712252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.26596662000667,0,0,7.1803291477915,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10391690523754,0.35142424497814,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,1.98486246255021,3.37616341233737,1.12264037773229,5.50998341799514,3.07024349440022,2.57366273829772,0,0,0,0,0,0,0.362578348774867,0,0.368323955743585,0.229628896329213,0,0.262248829918848,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,5.85681110395745,0.103041011647722,0.183138929636687,0,0,0,1.6068392984416,0.48335359146061,0,0,0,0,0,0,1.4245125703478,0,0,0,0,0.929691098594572,1.5740617341532,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,1.27264888758341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22439575525196,0,0,0,0,0,1.43176155503017,0,0,0,0.179021174675609,0,0.493217028184668,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,8.60613861800022,0.697118721393016,0.0769502585037971,3.64614578710404,0,0,0,1.27600463892768,1.55715908783166,3.19820865611181,0,0,0,0,0,0,0,0,0,0.163232808159148,0.424059214301822,0,0,0.0884575645033392,0,0,0,0,0,1.60515529459758,0,0,0.391329237864179,0,0,0,0,0,0,0,1.32930774541437,0,0.627865836814451,3.58417289318877,2.84609546029793,0.554698692052555,0,0,0,0,0,0,0.219267951258557,0,0.0969890164884194,0,0.451961481561065,1.64450309576101,0,0,0,0.0801588202515337,0,2.39771531498556,4.61089334893139,0,0.171594997861965,2.3048767678104,0,0.235694034616795,0,0.104602846312333,0.407992870545287,1.15580235960608,0,0,0,3.86788897277961,0,0.279282401272254,0.458320848023367,0.717873024576814,0,0,0,0.604651252380536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.75745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0.638341257770182,0,0,0,0,1.41348686625211,0,0,0,0,0,0,0,0,1.66814029295813,0.570930667089935,0,0,0,0,0,0.554805861502613,0,0.251567901752575,0,0.915360273587694,0.453692771289717,0,0,0.318593534327405,5.39763734596325,0.465788870628778,0.414706207840855,0.265841714557995,2.08698024724694,0,0.380805212168795,0,0.181848659202559,0.322231671127465,4.64033759878494,3.98095888698616,0,0,0.336749488765919,0,0,0,7.30784017502592,0.453411851024545,0,0.489473409012935,0.179088841081487,0,0.219284049578707,0,0,0.168942440653073,0.512483037175893,0,0.607719912354764,0,0,0,0,2.94848863961771,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0.786329709279482,0,0,0,0.123935764259002,0,0,0,0,1.05802783107205,0.3062454773532,0,0,0.159633859057151,0,0,0.0691572524642179,0,0,1.07962490351128,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,1.14986184875636,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0.170426809518315,0,0.4582137370881,0,0,0,0.687051635306701,0.121917924982269,0,0,0,0,0,0,0,7.9062257427272,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0.679708458751268,0,0,0,0,0,0.240724100067505,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0.109265571963696,0,0.101988829741982,4.27547848424897,1.10273879441814,0.250707539292375,0,0,0,0,0.426467963801962,0.476128862927481,0,0.0620747142958579,0.560659312903067,0,1.21270313374932,0,0.342233301085281,0.0673520530145875,0.143444410785353,0,0.325613074443898,0.106727345877715,0,0,0,0.244482888365733,0,0,0.201273793591026,0 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| ||
|short_description=p@chr6:74847986..74848013,+ | |||
}} | }} |
Latest revision as of 03:08, 31 July 2015
Short description: | p@chr6:74847986..74848013, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:74847986..74848013, + |
Coexpression cluster: | C4625_Endothelial_Lymphatic_cervical_Retinal_Preadipocyte_Mesenchymal_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 2.63e-21 | 6 |
endothelial cell of lymphatic vessel | 2.63e-21 | 6 |
vascular lymphangioblast | 2.63e-21 | 6 |
endothelial cell of vascular tree | 1.57e-12 | 24 |
capillary endothelial cell | 7.23e-11 | 3 |
omentum preadipocyte | 1.14e-10 | 3 |
preadipocyte of the breast | 5.16e-10 | 3 |
chorionic membrane mesenchymal stem cell | 5.33e-10 | 3 |
preadipocyte | 3.95e-09 | 12 |
endothelial cell | 1.21e-07 | 36 |
meso-epithelial cell | 5.70e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 8.90e-16 | 8 |
lymph vasculature | 8.90e-16 | 8 |
lymphatic part of lymphoid system | 8.90e-16 | 8 |
lymphoid system | 1.87e-12 | 10 |
microcirculatory vessel | 7.23e-11 | 3 |
endothelium of capillary | 7.23e-11 | 3 |
capillary | 7.23e-11 | 3 |
egg chorion | 5.33e-10 | 3 |
omentum | 4.52e-09 | 6 |
peritoneum | 4.52e-09 | 6 |
abdominal cavity | 4.52e-09 | 6 |
visceral peritoneum | 4.52e-09 | 6 |
body cavity | 5.59e-09 | 46 |
body cavity or lining | 2.96e-08 | 49 |
body cavity precursor | 3.11e-07 | 54 |
anatomical cavity | 3.79e-07 | 61 |
chest | 8.24e-07 | 11 |