FFCP PHASE1:Hg19::chr7:100609304..100609322,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:100609304..100609322,+
|short_description=p6@MUC3A,p6@MUC3B
|description=CAGE_peak_6_at_MUC3A_5end,CAGE_peak_6_at_MUC3B_5end
|association_with_transcript=-...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4584,57876 | |EntrezGene=4584,57876 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13384,7513 | |HGNC=13384,7513 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-17bp_to_ENST00000480291_5end | |||
|cluster_id=chr7:100609304..100609322,+ | |||
|coexpression_cluster_id=C4326 | |||
|description=CAGE_peak_6_at_MUC3A_5end,CAGE_peak_6_at_MUC3B_5end | |||
|id=chr7:100609304..100609322,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.87e-13!254;CL:0000039!8.14e-11!7;CL:0000586!8.14e-11!7;CL:0002322!1.48e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.21e-24;7!CL:0000586;2.21e-24;7!CL:0002322;6.15e-19;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.51e-24,7;CL:0000586,1.51e-24,7;CL:0002322,6.28e-19,5 | |||
|ontology_enrichment_development_v019=UBERON:0009847;9.42e-11;3!UBERON:0003353;9.42e-11;3!UBERON:0009117;1.09e-08;10!UBERON:0005564;1.09e-08;10 | |||
|ontology_enrichment_disease=DOID:305!9.47e-16!106;DOID:0050687!1.23e-14!143 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.70e-09;22!DOID:2994;4.70e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.39e-09,22;DOID:2994,4.39e-09,22;DOID:305,3.93e-07,106;DOID:0050687,4.27e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004921!2.73e-15!129;UBERON:0004185!2.73e-15!129;UBERON:0004119!2.38e-14!169;UBERON:0000925!2.38e-14!169;UBERON:0006595!2.38e-14!169;UBERON:0001007!4.05e-14!155;UBERON:0001555!4.05e-14!155;UBERON:0007026!4.05e-14!155;UBERON:0000077!2.24e-10!130;UBERON:0000160!3.64e-10!27;UBERON:0005409!4.49e-10!35;UBERON:0005911!5.13e-10!82;UBERON:0006554!5.44e-09!44;UBERON:0002108!1.06e-08!14;UBERON:0001008!1.19e-08!45;UBERON:0005177!7.82e-08!107;UBERON:0003101!1.28e-07!22;UBERON:0000079!1.28e-07!22;UBERON:0001041!1.77e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;4.85e-11;49!UBERON:0000160;9.65e-11;17!UBERON:0005409;2.84e-10;22!UBERON:0003101;8.42e-09;22!UBERON:0000079;8.42e-09;22!UBERON:0000473;3.11e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.52e-11,17;UBERON:0005409,5.29e-09,25;UBERON:0003101,7.75e-09,22;UBERON:0000079,7.75e-09,22;UBERON:0000473,2.66e-07,8 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0.491467873003018,1.39560233594486,0.655324116390517,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0.286804595389004,15.4906606784586,12.5903279905411,11.6193942869518,8.08556229119889,7.56962552626885,3.6497735907583,0,0,0,0,0,0.473227200159376,0.842923450390509,0,0.220587945464788,0.871517776369625,0,0.808987848960987,0.392442930250692,0,0,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0,4.5505722260952,0,0.548751427043128,0,0.301586917234893,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0.671928512795438,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02148623979056,0.802025881213139,0.368323955743585,0,0,0,0,1.00119938235739,0,0,0.316654886678627,0,0,0,0,0,0,0.509752546090077,0.831076008928724,0.223874754722178,0,0,0,0,0,0.618246069886334,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,3.01353760869861,0,1.7737206141467,0.918893600827838,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43282702530686,0,0,0,0.852408440419239,9.31103490476991,0.890894042497916,10.1363031692747,0,0,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,2.32727527078292,0,0.0986434056369336,0,0,0,0,1.99613798001194,0,0,0,0,0,0.472775363535873,0,0,0,0,0.120596438625408,0,0,0,0,1.19832309870889,0.697118721393016,0,0,5.53353370531344,6.64206568632314,7.71396340646257,1.5950057986596,0,0,0,0,0,1.1279783030859,0.980312671588698,0.335643173951685,0,0,0,0.163232808159148,5.65412285735763,0,0.995261931078505,2.56526937059684,2.4441205797345,0,0.247127877893006,0.208843899010911,0,0,0,0,0.978323094660449,0,0,1.20990716048664,1.53036380815245,0,0,0.207376382794494,0,0.330991955875499,0.313932918407225,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0,0.353024506766001,0,0,0,0.0633107959558787,1.56441106187842,0,1.06726497369676,2.79733453414982,0.72045208577053,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0.0824158583811665,0.202210631562555,0,0,0,0,8.51991686864602,9.90283943500083,7.06248574649615,0,0,0,0,0.315222829196793,0.472091293214983,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0.113312091520126,0.732761168390412,1.32506888912221,0.129282956361551,0.13223260174269,0.855434189421647,0.704815022316672,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,3.27453711692416,0,0,0,0,0,0,3.39681591877069,0,0.176689145945881,0.192914038270915,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0.687034029507179,0.589848616738702,0,0,0,0,0,0,0,2.34454203369928,12.8334280295897,0,0.739280431085226,0,0,0,0,1.09394961803644,0,0.992422356778588,0,0.511049710558381,0,0,0,0.682986574053893,0.266107110487916,0.115233987555779,0,0.203909198930495,0,1.65471377237555,4.00433046811449,2.11931350696388,0,2.5224494698241,0,2.80705868584208,0.47775168788705,0.142953088353313,0,1.16241425368125,0,0,0,0,0,0.430227358820278,0.118332000730565,0.0852134047591577,0,0,0,0,5.03349443090065,0.490751168076215,4.3890452993617,0,0,0,0,0,0.397901550322736,0,0,0.219881033490858,0,2.46957305945423,1.5299169235277,2.35158648180761,0,0.235676547101626,0,0.297046400327086,0,0,0,0,0,2.32120120187355,0,0.160482733378337,0,0,0,0,0,0.436350690340377,1.5870805215462,0,0,0,0.252332849670158,2.29457701123761,0.126698501011437,3.77358670045332,12.0247832369502,1.8378979906969,6.26768848230938,0.151557396436479,0,0,0,0.213233981900981,0,0,0.124149428591716,0,0,0,0,0,0.202056159043763,0.143444410785353,0,0,0,0,0.538951212639521,0,0.122241444182866,0.406896178315738,0,0,0 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| ||
|short_description=p6@MUC3A,p6@MUC3B | |||
}} | }} |
Latest revision as of 15:12, 24 September 2015
Short description: | p6@MUC3A, p6@MUC3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MUC3A_5end, CAGE_peak_6_at_MUC3B_5end |
Coexpression cluster: | C4326_amniotic_H9_testicular_pancreatic_iPS_choriocarcinoma_signet |
Association with transcript: | -17bp_to_ENST00000480291_5end |
EntrezGene: | 4584,57876 |
HGNC: | 7513&submit=Submit 13384, 7513 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.51e-24 | 7 |
germ cell | 1.51e-24 | 7 |
embryonic stem cell | 6.28e-19 | 5 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.52e-11 | 17 |
gastrointestinal system | 5.29e-09 | 25 |
male organism | 7.75e-09 | 22 |
male reproductive system | 7.75e-09 | 22 |
testis | 2.66e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.39e-09 | 22 |
germ cell cancer | 4.39e-09 | 22 |
carcinoma | 3.93e-07 | 106 |
cell type cancer | 4.27e-07 | 143 |