FFCP PHASE1:Hg19::chr7:137761167..137761191,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:137761167..137761191,+
|short_description=p3@AKR1D1
|description=CAGE_peak_3_at_AKR1D1_5end
|association_with_transcript=0bp_to_ENST00000432161,NM_00119090...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6718 | |EntrezGene=6718 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=388 | |HGNC=388 | ||
|TSSclassifier=strong | |||
|UniProt=B4DPN3,B4DPN8,P51857 | |UniProt=B4DPN3,B4DPN8,P51857 | ||
|association_with_transcript=0bp_to_ENST00000432161,NM_001190906,NM_001190907,NM_005989,uc011kqe.1_5end | |||
|cluster_id=chr7:137761167..137761191,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_AKR1D1_5end | |||
|id=chr7:137761167..137761191,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.50e-45!12;CL:0000417!2.50e-45!12;CL:0000668!2.50e-45!12;CL:0000414!2.50e-45!12;CL:0000412!2.50e-45!12;CL:0000182!2.50e-45!12;CL:0000223!4.29e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;7.30e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.30e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.68e-11;11!UBERON:0009497;1.04e-09;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.13e-50!19;UBERON:0006925!1.13e-50!19;UBERON:0008836!1.13e-50!19;UBERON:0008835!1.03e-43!22;UBERON:0003894!1.03e-43!22;UBERON:0009854!8.53e-42!23;UBERON:0007499!2.02e-38!25;UBERON:0009497!2.02e-38!25;UBERON:0000015!2.02e-38!25;UBERON:0002423!2.02e-38!25;UBERON:0006235!2.02e-38!25;UBERON:0004161!2.02e-38!25;UBERON:0005057!6.30e-37!26;UBERON:0009856!6.30e-37!26;UBERON:0002365!6.69e-31!31;UBERON:0002330!6.69e-31!31;UBERON:0002368!2.57e-27!35;UBERON:0000949!3.91e-21!45;UBERON:0003929!1.61e-17!54;UBERON:0005172!3.43e-17!55;UBERON:0005173!3.43e-17!55;UBERON:0002530!5.50e-16!59;UBERON:0002417!1.92e-15!61;UBERON:0000916!1.92e-15!61;UBERON:0005911!2.51e-11!82;UBERON:0002405!6.83e-10!115;UBERON:0001041!2.29e-09!98;UBERON:0005177!1.61e-08!107;UBERON:0009569!4.97e-08!113;UBERON:0003914!1.17e-07!118;UBERON:0000466!3.99e-07!126;UBERON:0000077!6.96e-07!130;UBERON:0004921!6.96e-07!129;UBERON:0004185!6.96e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.59e-37;19!UBERON:0006925;2.59e-37;19!UBERON:0002423;1.70e-28;25!UBERON:0002365;5.16e-23;31!UBERON:0002330;5.16e-23;31!UBERON:0002368;7.09e-20;33!UBERON:0000949;2.04e-14;43!UBERON:0005172;2.12e-10;52!UBERON:0005173;2.12e-10;52!UBERON:0002417;4.85e-08;58!UBERON:0000916;4.85e-08;58!UBERON:0002530;1.37e-07;57!UBERON:0001007;1.81e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.59e-37,19;UBERON:0006925,2.59e-37,19;UBERON:0008836,2.59e-37,19;UBERON:0008835,2.63e-32,22;UBERON:0003894,2.63e-32,22;UBERON:0009854,6.31e-31,23;UBERON:0007499,1.70e-28,25;UBERON:0009497,1.70e-28,25;UBERON:0000015,1.70e-28,25;UBERON:0002423,1.70e-28,25;UBERON:0006235,1.70e-28,25;UBERON:0004161,1.70e-28,25;UBERON:0009856,2.02e-27,26;UBERON:0002365,4.41e-23,31;UBERON:0002330,4.41e-23,31;UBERON:0002368,1.68e-20,35;UBERON:0000949,4.83e-16,45;UBERON:0003929,1.96e-13,54;UBERON:0005172,1.96e-13,54;UBERON:0005173,1.96e-13,54;UBERON:0002530,2.51e-12,59;UBERON:0002417,3.98e-12,60;UBERON:0000916,3.98e-12,60;UBERON:0005911,5.90e-09,82;UBERON:0001041,1.87e-08,87;UBERON:0005177,2.57e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.2940607947676,4.91413608338813,9.45263850690247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.0153445059644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.1386178734263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393915911536118,0.576911008668165,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.9656701034247,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.2940607947676,4.91413608338813,9.45263850690247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.0153445059644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.1386178734263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393915911536118,0.576911008668165,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.9656701034247,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@AKR1D1 | |||
}} | }} |
Latest revision as of 14:48, 16 September 2015
Short description: | p3@AKR1D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AKR1D1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000432161, NM_001190906, NM_001190907, NM_005989, uc011kqe.1_5end |
EntrezGene: | AKR1D1 |
HGNC: | 388 |
UniProt: | B4DPN3B4DPN8P51857 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.30e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.59e-37 | 19 |
digestive gland | 2.59e-37 | 19 |
liver bud | 2.59e-37 | 19 |
hepatic diverticulum | 2.63e-32 | 22 |
liver primordium | 2.63e-32 | 22 |
digestive tract diverticulum | 6.31e-31 | 23 |
epithelial sac | 1.70e-28 | 25 |
epithelium of foregut-midgut junction | 1.70e-28 | 25 |
anatomical boundary | 1.70e-28 | 25 |
hepatobiliary system | 1.70e-28 | 25 |
foregut-midgut junction | 1.70e-28 | 25 |
septum transversum | 1.70e-28 | 25 |
sac | 2.02e-27 | 26 |
exocrine gland | 4.41e-23 | 31 |
exocrine system | 4.41e-23 | 31 |
endocrine gland | 1.68e-20 | 35 |
endocrine system | 4.83e-16 | 45 |
gut epithelium | 1.96e-13 | 54 |
abdomen element | 1.96e-13 | 54 |
abdominal segment element | 1.96e-13 | 54 |
gland | 2.51e-12 | 59 |
abdominal segment of trunk | 3.98e-12 | 60 |
abdomen | 3.98e-12 | 60 |
endo-epithelium | 5.90e-09 | 82 |
foregut | 1.87e-08 | 87 |
trunk region element | 2.57e-07 | 101 |