FFCP PHASE1:Hg19::chr7:69289580..69289610,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:69289580..69289610,+
|short_description=p6@AUTS2
|description=CAGE_peak_6_at_AUTS2_5end
|association_with_transcript=-1bp_to_ENST00000476695_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26053 | |EntrezGene=26053 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14262 | |HGNC=14262 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_ENST00000476695_5end | |||
|cluster_id=chr7:69289580..69289610,+ | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_6_at_AUTS2_5end | |||
|id=chr7:69289580..69289610,+ | |||
|ontology_enrichment_celltype=CL:0000945!6.64e-31!24;CL:0000826!6.64e-31!24;CL:0000542!2.08e-27!53;CL:0000051!2.08e-27!53;CL:0000838!3.35e-26!52;CL:0000738!1.66e-24!140;CL:0002087!4.76e-23!119;CL:0000236!8.43e-23!14;CL:0000037!5.20e-20!172;CL:0000566!5.20e-20!172;CL:0000988!6.79e-18!182;CL:0002031!6.85e-18!124;CL:0002032!8.39e-16!165;CL:0000837!8.39e-16!165 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.94e-55;24!CL:0000236;5.70e-43;13!CL:0000542;5.80e-21;53!CL:0000784;2.30e-12;3!CL:0000226;1.21e-11;3!CL:0000842;1.21e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.98e-55,24;CL:0000826,1.98e-55,24;CL:0000236,1.06e-39,14;CL:0000542,3.43e-33,53;CL:0000051,3.43e-33,53;CL:0000838,6.02e-31,52;CL:0000738,2.31e-19,136;CL:0002087,4.55e-19,115;CL:0000037,2.87e-14,168;CL:0000988,3.59e-13,177;CL:0002031,1.67e-12,120;CL:0000784,2.21e-12,3;CL:0000226,1.21e-11,3;CL:0000842,1.21e-11,3;CL:0002032,1.10e-09,161;CL:0000837,1.10e-09,161 | |||
|ontology_enrichment_development_v019=CL:0000051;5.80e-21;53!UBERON:0004872;3.41e-09;7 | |||
|ontology_enrichment_disease=DOID:0060058!9.90e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;5.44e-13;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.57e-13,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.36e-18!115;UBERON:0000178!3.89e-14!15;UBERON:0000179!3.89e-14!15;UBERON:0000463!3.89e-14!15;UBERON:0002390!4.45e-09!102;UBERON:0003061!4.45e-09!102;UBERON:0002193!5.68e-09!112;UBERON:0004177!1.07e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.01e-32;15!UBERON:0000179;4.01e-32;15!UBERON:0000463;4.01e-32;15!UBERON:0002390;2.17e-26;32!UBERON:0004177;5.84e-19;5!UBERON:0005057;5.84e-19;5!UBERON:0002193;1.26e-18;42!UBERON:0002106;1.62e-12;3!UBERON:0002370;3.57e-08;2!UBERON:0005058;3.57e-08;2!UBERON:0009113;3.57e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.06e-32,15;UBERON:0000179,3.06e-32,15;UBERON:0000463,3.06e-32,15;UBERON:0004177,2.11e-13,7;UBERON:0005057,2.11e-13,7;UBERON:0002106,1.56e-12,3;UBERON:0004854,1.56e-12,3;UBERON:0009034,1.56e-12,3;UBERON:0002095,1.56e-12,3;UBERON:0004782,1.56e-12,3;UBERON:0003281,1.56e-12,3;UBERON:0009664,1.56e-12,3;UBERON:0002296,1.56e-12,3;UBERON:0005602,1.56e-12,3;UBERON:0001179,1.56e-12,3;UBERON:0006293,1.56e-12,3;UBERON:0002193,8.35e-10,108;UBERON:0002390,8.45e-09,98;UBERON:0003061,8.45e-09,98 | |||
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| ||
|short_description=p6@AUTS2 | |||
}} | }} |
Latest revision as of 07:48, 19 September 2015
Short description: | p6@AUTS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_AUTS2_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -1bp_to_ENST00000476695_5end |
EntrezGene: | AUTS2 |
HGNC: | 14262 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.98e-55 | 24 |
pro-B cell | 1.98e-55 | 24 |
B cell | 1.06e-39 | 14 |
lymphocyte | 3.43e-33 | 53 |
common lymphoid progenitor | 3.43e-33 | 53 |
lymphoid lineage restricted progenitor cell | 6.02e-31 | 52 |
leukocyte | 2.31e-19 | 136 |
nongranular leukocyte | 4.55e-19 | 115 |
hematopoietic stem cell | 2.87e-14 | 168 |
hematopoietic cell | 3.59e-13 | 177 |
hematopoietic lineage restricted progenitor cell | 1.67e-12 | 120 |
plasmacytoid dendritic cell | 2.21e-12 | 3 |
single nucleate cell | 1.21e-11 | 3 |
mononuclear cell | 1.21e-11 | 3 |
hematopoietic oligopotent progenitor cell | 1.10e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.10e-09 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 3.06e-32 | 15 |
haemolymphatic fluid | 3.06e-32 | 15 |
organism substance | 3.06e-32 | 15 |
hemopoietic organ | 2.11e-13 | 7 |
immune organ | 2.11e-13 | 7 |
spleen | 1.56e-12 | 3 |
gastrointestinal system mesentery | 1.56e-12 | 3 |
stomach region | 1.56e-12 | 3 |
mesentery | 1.56e-12 | 3 |
gastrointestinal system serosa | 1.56e-12 | 3 |
mesentery of stomach | 1.56e-12 | 3 |
gut mesentery | 1.56e-12 | 3 |
dorsal mesentery | 1.56e-12 | 3 |
dorsal mesogastrium | 1.56e-12 | 3 |
peritoneal cavity | 1.56e-12 | 3 |
spleen primordium | 1.56e-12 | 3 |
hemolymphoid system | 8.35e-10 | 108 |
hematopoietic system | 8.45e-09 | 98 |
blood island | 8.45e-09 | 98 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.57e-13 | 10 |