FFCP PHASE1:Hg19::chr7:84122033..84122049,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:84122033..84122049,-
|short_description=p9@SEMA3A
|description=CAGE_peak_9_at_SEMA3A_5end
|association_with_transcript=0bp_to_ENST00000424555_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10371 | |EntrezGene=10371 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10723 | |HGNC=10723 | ||
|TSSclassifier=strong | |||
|UniProt=C9JD25 | |UniProt=C9JD25 | ||
|association_with_transcript=0bp_to_ENST00000424555_5end | |||
|cluster_id=chr7:84122033..84122049,- | |||
|description=CAGE_peak_9_at_SEMA3A_5end | |||
|id=chr7:84122033..84122049,- | |||
|ontology_enrichment_celltype=CL:0002620!1.08e-25!23;CL:0000057!2.82e-17!75;CL:0000055!1.14e-08!180;CL:0000667!2.08e-07!6;CL:0000058!2.08e-07!6;CL:0000138!2.08e-07!6;CL:0000153!9.00e-07!9;CL:0000447!9.00e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.25e-27;23!CL:0000153;7.26e-10;9!CL:0000447;7.26e-10;9!CL:0000138;1.04e-09;6!CL:0000057;5.09e-09;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.04e-27,23;CL:0000057,5.43e-15,76;CL:0000153,6.87e-10,9;CL:0000447,6.87e-10,9;CL:0000058,9.72e-10,6;CL:0000138,9.72e-10,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.79e-09!5;DOID:450!3.79e-09!5;DOID:66!3.79e-09!5;DOID:423!3.79e-09!5;DOID:0080000!3.79e-09!5;DOID:11722!3.79e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:17;5.58e-12;5!DOID:450;5.58e-12;5!DOID:66;5.58e-12;5!DOID:423;5.58e-12;5!DOID:0080000;5.58e-12;5!DOID:11722;5.58e-12;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.53e-12,5;DOID:450,4.53e-12,5;DOID:66,4.53e-12,5;DOID:423,4.53e-12,5;DOID:0080000,4.53e-12,5;DOID:11722,4.53e-12,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!3.32e-20!45;UBERON:0002416!3.32e-20!45;UBERON:0002097!4.15e-20!40;UBERON:0003102!3.97e-18!95;UBERON:0002067!7.95e-08!9;UBERON:0004016!7.95e-08!9;UBERON:0010083!7.95e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;6.10e-16;41!UBERON:0002199;3.18e-14;46!UBERON:0002416;3.18e-14;46!UBERON:0003102;8.66e-13;50!UBERON:0000007;1.04e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.63e-21,41;UBERON:0002199,1.55e-20,46;UBERON:0002416,1.55e-20,46;UBERON:0003102,8.82e-13,99;UBERON:0000007,7.92e-08,2;UBERON:0002384,2.67e-07,371 | |||
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| ||
|short_description=p9@SEMA3A | |||
}} | }} |
Latest revision as of 19:49, 19 September 2015
Short description: | p9@SEMA3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SEMA3A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000424555_5end |
EntrezGene: | SEMA3A |
HGNC: | 10723 |
UniProt: | C9JD25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.04e-27 | 23 |
fibroblast | 5.43e-15 | 76 |
GAG secreting cell | 6.87e-10 | 9 |
carbohydrate secreting cell | 6.87e-10 | 9 |
chondroblast | 9.72e-10 | 6 |
chondrocyte | 9.72e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.63e-21 | 41 |
integument | 1.55e-20 | 46 |
integumental system | 1.55e-20 | 46 |
surface structure | 8.82e-13 | 99 |
pituitary gland | 7.92e-08 | 2 |
connective tissue | 2.67e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.53e-12 | 5 |
myotonic disease | 4.53e-12 | 5 |
muscle tissue disease | 4.53e-12 | 5 |
myopathy | 4.53e-12 | 5 |
muscular disease | 4.53e-12 | 5 |
myotonic dystrophy | 4.53e-12 | 5 |