FFCP PHASE1:Hg19::chr10:120101804..120101843,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=63877 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25794 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H8W3,F2Z2Y3 | |||
|association_with_transcript=0bp_to_ENST00000369172,ENST00000369183,ENST00000469758,ENST00000470476,ENST00000487269,NM_001134672,NM_022063,uc001ldo.2,uc010qss.1_5end | |||
|cluster_id=chr10:120101804..120101843,- | |||
|description=CAGE_peak_1_at_FAM204A_5end | |||
|id=chr10:120101804..120101843,- | |||
|ontology_enrichment_celltype=CL:0002057!7.63e-10!42;CL:0000839!1.22e-09!70;CL:0000860!3.34e-09!45;CL:0000766!1.71e-08!76;CL:0002031!3.05e-08!124;CL:0000557!7.49e-08!71;CL:0000738!7.65e-08!140;CL:0000037!1.31e-07!172;CL:0000566!1.31e-07!172;CL:0002194!2.75e-07!63;CL:0000576!2.75e-07!63;CL:0000040!2.75e-07!63;CL:0000559!2.75e-07!63;CL:0002009!6.10e-07!65;CL:0002087!6.10e-07!119;CL:0002032!6.22e-07!165;CL:0000837!6.22e-07!165;CL:0000763!9.16e-07!112;CL:0000049!9.16e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000576;5.02e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,2.02e-10,66;CL:0000860,7.63e-10,42;CL:0002057,7.63e-10,42;CL:0000766,3.85e-09,72;CL:0002031,1.15e-08,120;CL:0000557,1.72e-08,67;CL:0000738,3.27e-08,136;CL:0000473,4.59e-08,48;CL:0000234,4.59e-08,48;CL:0002194,6.03e-08,59;CL:0000576,6.03e-08,59;CL:0000040,6.03e-08,59;CL:0000559,6.03e-08,59;CL:0000037,6.48e-08,168;CL:0002009,1.49e-07,61;CL:0002087,2.56e-07,115;CL:0002032,3.17e-07,161;CL:0000837,3.17e-07,161;CL:0000763,3.77e-07,108;CL:0000049,3.77e-07,108;CL:0000988,4.77e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.68e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.17e-11!115;UBERON:0002390!1.17e-07!102;UBERON:0003061!1.17e-07!102;UBERON:0004765!1.62e-07!101;UBERON:0001434!1.62e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.33e-11,114;UBERON:0002390,4.04e-08,98;UBERON:0003061,4.04e-08,98;UBERON:0001434,2.23e-07,100;UBERON:0002371,3.28e-07,76;UBERON:0001474,3.85e-07,82;UBERON:0004765,7.63e-07,90 | |||
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| |||
|short_description=p1@FAM204A | |||
}} |
Latest revision as of 16:17, 16 September 2015
Short description: | p1@FAM204A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM204A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000369172, ENST00000369183, ENST00000469758, ENST00000470476, ENST00000487269, NM_001134672, NM_022063, uc001ldo.2, uc010qss.1_5end |
EntrezGene: | FAM204A |
HGNC: | 25794 |
UniProt: | Q9H8W3F2Z2Y3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 2.02e-10 | 66 |
classical monocyte | 7.63e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.63e-10 | 42 |
myeloid leukocyte | 3.85e-09 | 72 |
hematopoietic lineage restricted progenitor cell | 1.15e-08 | 120 |
granulocyte monocyte progenitor cell | 1.72e-08 | 67 |
leukocyte | 3.27e-08 | 136 |
defensive cell | 4.59e-08 | 48 |
phagocyte | 4.59e-08 | 48 |
monopoietic cell | 6.03e-08 | 59 |
monocyte | 6.03e-08 | 59 |
monoblast | 6.03e-08 | 59 |
promonocyte | 6.03e-08 | 59 |
hematopoietic stem cell | 6.48e-08 | 168 |
macrophage dendritic cell progenitor | 1.49e-07 | 61 |
nongranular leukocyte | 2.56e-07 | 115 |
hematopoietic oligopotent progenitor cell | 3.17e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.17e-07 | 161 |
myeloid cell | 3.77e-07 | 108 |
common myeloid progenitor | 3.77e-07 | 108 |
hematopoietic cell | 4.77e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.33e-11 | 114 |
hematopoietic system | 4.04e-08 | 98 |
blood island | 4.04e-08 | 98 |
skeletal system | 2.23e-07 | 100 |
bone marrow | 3.28e-07 | 76 |
bone element | 3.85e-07 | 82 |
skeletal element | 7.63e-07 | 90 |