FFCP PHASE1:Hg19::chr10:6054812..6054831,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:6054812..6054831,+ | |||
|coexpression_cluster_id=C3030 | |||
|description=CAGE_peak_at_chr10:6054812..6054831,+ | |||
|id=chr10:6054812..6054831,+ | |||
|ontology_enrichment_celltype=CL:0000542!3.95e-16!53;CL:0000051!3.95e-16!53;CL:0000080!1.01e-14!6;CL:0000838!3.71e-14!52;CL:0000084!2.56e-12!25;CL:0000827!2.56e-12!25;CL:0000988!3.23e-12!182;CL:0000815!2.97e-11!2;CL:0000792!2.97e-11!2;CL:0002677!2.97e-11!2;CL:0000037!1.71e-09!172;CL:0000566!1.71e-09!172;CL:0002032!5.26e-09!165;CL:0000837!5.26e-09!165;CL:0002087!1.11e-08!119;CL:0000898!8.77e-08!3;CL:0002031!3.93e-07!124;CL:0000738!7.18e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.26e-15;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,3.31e-15,25;CL:0000827,3.31e-15,25;CL:0000838,2.59e-07,52;CL:0000542,3.57e-07,53;CL:0000051,3.57e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!3.08e-12!51;DOID:0060083!3.08e-12!51;DOID:0060058!7.29e-09!10;DOID:1240!3.06e-07!39;DOID:0060060!7.77e-07!1;DOID:0060061!7.77e-07!1;DOID:8691!7.77e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060060;1.04e-16;1!DOID:0060061;1.04e-16;1!DOID:8691;1.04e-16;1!DOID:0060058;2.28e-14;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.21e-16,1;DOID:0060061,1.21e-16,1;DOID:8691,1.21e-16,1;DOID:0060058,2.33e-14,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.31e-14;10!UBERON:0000178;6.11e-10;15!UBERON:0000179;6.11e-10;15!UBERON:0000463;6.11e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.28e-14,10;UBERON:0000358,1.28e-14,10;UBERON:0000307,1.28e-14,10;UBERON:0000091,1.28e-14,10;UBERON:0000087,1.28e-14,10;UBERON:0007010,1.28e-14,10;UBERON:0007806,1.28e-14,10;UBERON:0008780,1.28e-14,10;UBERON:0005728,1.28e-14,10;UBERON:0000178,6.02e-10,15;UBERON:0000179,6.02e-10,15;UBERON:0000463,6.02e-10,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501559486172034,0.32592226663359,0,1.94826728407911,0.222820913770347,0.294605907474837,0.221533894583621,0.541607727530031,9.47875765969996,8.06367954871245,1.15106533222573,1.38175008892924,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0.561594356226918,0,0,0,0,0,0.80719882876419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.90350890820905,0,0,0,0,0,0,0,1.31843099381408,0,0,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,4.44781693020933,8.40234784836219,10.6510388495564,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8402114799552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39972270880846,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:6054812..6054831,+ | |||
}} |
Latest revision as of 14:19, 23 July 2015
Short description: | p@chr10:6054812..6054831, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:6054812..6054831, + |
Coexpression cluster: | C3030_cord_CD4_mycosis_adult_anaplastic_hairy_Neutrophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 3.31e-15 | 25 |
pro-T cell | 3.31e-15 | 25 |
lymphoid lineage restricted progenitor cell | 2.59e-07 | 52 |
lymphocyte | 3.57e-07 | 53 |
common lymphoid progenitor | 3.57e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.28e-14 | 10 |
blastocyst | 1.28e-14 | 10 |
blastula | 1.28e-14 | 10 |
bilaminar disc | 1.28e-14 | 10 |
inner cell mass | 1.28e-14 | 10 |
cleaving embryo | 1.28e-14 | 10 |
connecting stalk | 1.28e-14 | 10 |
inner cell mass derived epiblast | 1.28e-14 | 10 |
extraembryonic mesoderm | 1.28e-14 | 10 |
blood | 6.02e-10 | 15 |
haemolymphatic fluid | 6.02e-10 | 15 |
organism substance | 6.02e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.21e-16 | 1 |
cutaneous T cell lymphoma | 1.21e-16 | 1 |
mycosis fungoides | 1.21e-16 | 1 |
lymphoma | 2.33e-14 | 10 |