FFCP PHASE1:Hg19::chr11:102323489..102323576,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114908 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30138 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000361236_5end | |||
|cluster_id=chr11:102323489..102323576,- | |||
|description=CAGE_peak_1_at_TMEM123_5end | |||
|id=chr11:102323489..102323576,- | |||
|ontology_enrichment_celltype=CL:0000738!1.61e-15!140;CL:0002087!7.21e-15!119;CL:0000037!2.86e-14!172;CL:0000566!2.86e-14!172;CL:0002032!5.14e-13!165;CL:0000837!5.14e-13!165;CL:0000988!4.71e-12!182;CL:0002031!1.85e-11!124;CL:0002009!4.64e-09!65;CL:0002194!1.19e-08!63;CL:0000576!1.19e-08!63;CL:0000040!1.19e-08!63;CL:0000559!1.19e-08!63;CL:0000766!2.38e-08!76;CL:0000763!1.00e-07!112;CL:0000049!1.00e-07!112;CL:0000557!2.10e-07!71;CL:0002057!8.65e-07!42;CL:0000084!9.21e-07!25;CL:0000827!9.21e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.94e-08;33!CL:0002057;1.94e-08;33!CL:0000473;2.70e-08;39!CL:0000234;2.70e-08;39!CL:0000084;9.04e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.98e-16,136;CL:0002087,2.33e-15,115;CL:0000037,1.38e-14,168;CL:0002032,2.56e-13,161;CL:0000837,2.56e-13,161;CL:0000988,1.98e-12,177;CL:0002031,8.02e-12,120;CL:0002009,1.31e-09,61;CL:0002194,3.45e-09,59;CL:0000576,3.45e-09,59;CL:0000040,3.45e-09,59;CL:0000559,3.45e-09,59;CL:0000766,8.84e-09,72;CL:0000473,4.23e-08,48;CL:0000234,4.23e-08,48;CL:0000763,5.39e-08,108;CL:0000049,5.39e-08,108;CL:0000557,8.31e-08,67;CL:0000860,8.65e-07,42;CL:0002057,8.65e-07,42;CL:0000084,9.21e-07,25;CL:0000827,9.21e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0001041;9.28e-08;30 | |||
|ontology_enrichment_disease=DOID:162!4.98e-08!235;DOID:0050687!2.25e-07!143;DOID:305!5.25e-07!106;DOID:14566!6.06e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.98e-08,235;DOID:0050687,2.25e-07,143;DOID:305,5.25e-07,106;DOID:14566,6.06e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001007!5.03e-10!155;UBERON:0001555!5.03e-10!155;UBERON:0007026!5.03e-10!155;UBERON:0002390!5.00e-09!102;UBERON:0003061!5.00e-09!102;UBERON:0002405!8.15e-09!115;UBERON:0004921!1.76e-08!129;UBERON:0004185!1.76e-08!129;UBERON:0002193!2.50e-08!112;UBERON:0004119!1.07e-07!169;UBERON:0000925!1.07e-07!169;UBERON:0006595!1.07e-07!169;UBERON:0000077!1.60e-07!130;UBERON:0003929!6.74e-07!54;UBERON:0005911!6.75e-07!82;UBERON:0001041!7.04e-07!98 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.25e-09,98;UBERON:0003061,2.25e-09,98;UBERON:0001007,4.07e-09,145;UBERON:0001555,4.07e-09,145;UBERON:0007026,4.07e-09,145;UBERON:0002193,1.28e-08,108;UBERON:0004921,8.36e-08,118;UBERON:0004119,5.49e-07,160;UBERON:0000925,5.49e-07,160;UBERON:0006595,5.49e-07,160;UBERON:0002405,6.65e-07,93;UBERON:0003929,6.74e-07,54;UBERON:0005911,6.75e-07,82 | |||
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| |||
|short_description=p1@TMEM123 | |||
}} |
Latest revision as of 17:37, 24 September 2015
Short description: | p1@TMEM123 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM123_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000361236_5end |
EntrezGene: | TMEM123 |
HGNC: | 30138 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.98e-16 | 136 |
nongranular leukocyte | 2.33e-15 | 115 |
hematopoietic stem cell | 1.38e-14 | 168 |
hematopoietic oligopotent progenitor cell | 2.56e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.56e-13 | 161 |
hematopoietic cell | 1.98e-12 | 177 |
hematopoietic lineage restricted progenitor cell | 8.02e-12 | 120 |
macrophage dendritic cell progenitor | 1.31e-09 | 61 |
monopoietic cell | 3.45e-09 | 59 |
monocyte | 3.45e-09 | 59 |
monoblast | 3.45e-09 | 59 |
promonocyte | 3.45e-09 | 59 |
myeloid leukocyte | 8.84e-09 | 72 |
defensive cell | 4.23e-08 | 48 |
phagocyte | 4.23e-08 | 48 |
myeloid cell | 5.39e-08 | 108 |
common myeloid progenitor | 5.39e-08 | 108 |
granulocyte monocyte progenitor cell | 8.31e-08 | 67 |
classical monocyte | 8.65e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.65e-07 | 42 |
T cell | 9.21e-07 | 25 |
pro-T cell | 9.21e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.25e-09 | 98 |
blood island | 2.25e-09 | 98 |
digestive system | 4.07e-09 | 145 |
digestive tract | 4.07e-09 | 145 |
primitive gut | 4.07e-09 | 145 |
hemolymphoid system | 1.28e-08 | 108 |
subdivision of digestive tract | 8.36e-08 | 118 |
endoderm-derived structure | 5.49e-07 | 160 |
endoderm | 5.49e-07 | 160 |
presumptive endoderm | 5.49e-07 | 160 |
immune system | 6.65e-07 | 93 |
gut epithelium | 6.74e-07 | 54 |
endo-epithelium | 6.75e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.98e-08 | 235 |
cell type cancer | 2.25e-07 | 143 |
carcinoma | 5.25e-07 | 106 |
disease of cellular proliferation | 6.06e-07 | 239 |