FFCP PHASE1:Hg19::chr11:118186284..118186306,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:118186284..118186306,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_at_chr11:118186284..118186306,+ | |||
|id=chr11:118186284..118186306,+ | |||
|ontology_enrichment_celltype=CL:0000084!3.44e-26!25;CL:0000827!3.44e-26!25;CL:0000791!2.32e-21!18;CL:0000789!2.32e-21!18;CL:0002420!2.32e-21!18;CL:0002419!2.32e-21!18;CL:0000790!2.32e-21!18;CL:0000838!1.20e-15!52;CL:0000542!2.93e-15!53;CL:0000051!2.93e-15!53;CL:0000625!1.44e-12!11;CL:0000623!4.38e-10!3;CL:0000825!4.38e-10!3;CL:0000842!1.04e-09!3;CL:0000624!3.31e-08!6;CL:0002087!6.68e-08!119;CL:0000224!2.28e-07!4;CL:0000738!2.40e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000623;2.22e-20;3!CL:0000791;3.25e-09;18!CL:0000789;3.25e-09;18!CL:0002419;3.25e-09;18!CL:0000084;3.51e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.60e-20,3;CL:0000825,1.60e-20,3;CL:0000791,3.37e-09,18;CL:0000789,3.37e-09,18;CL:0002420,3.37e-09,18;CL:0002419,3.37e-09,18;CL:0000790,3.37e-09,18;CL:0000084,4.15e-09,25;CL:0000827,4.15e-09,25;CL:0000838,6.13e-09,52;CL:0000542,9.60e-09,53;CL:0000051,9.60e-09,53 | |||
|ontology_enrichment_development_v019=CL:0000790;3.25e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.42e-11!15;UBERON:0000179!3.42e-11!15;UBERON:0000463!3.42e-11!15;UBERON:0002370!1.15e-07!4;UBERON:0005058!1.15e-07!4;UBERON:0009113!1.15e-07!4;UBERON:0003295!1.15e-07!4;UBERON:0005562!1.15e-07!4;UBERON:0004177!3.18e-07!7;UBERON:0007023!7.58e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;9.70e-15;2!UBERON:0005058;9.70e-15;2!UBERON:0009113;9.70e-15;2!UBERON:0000029;6.18e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,3.34e-08,1;UBERON:0002370,6.00e-08,4;UBERON:0005058,6.00e-08,4;UBERON:0009113,6.00e-08,4;UBERON:0003295,6.00e-08,4;UBERON:0005562,6.00e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0.393010762749165,1.64481199199607,1.33749196312542,0,0.473447805734733,0,2.00538822393312,2.06224135232386,1.10766947291811,1.08321545506006,2.43373507478783,2.21100890851793,2.46656856905514,1.38175008892924,1.15921234294021,1.92772532110679,1.33770414044857,1.04535523804977,2.26618685395132,0,1.71813722741315,3.54227568827304,2.22995790026868,0,0,0.602300476311091,0.895906278080929,0,0.947109008176067,0,1.00803371612366,1.87208137048455,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,1.37921532141349,1.72502059887614,1.28343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,0.647142602455851,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0,0.497992903438899,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0,0.414239055347196,1.9846640872478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617393264863557,0,0,0,0,0,0,0,0,0.751871343838829,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0.213233981900981,0,17.5035945655577,1.98639085746745,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr11:118186284..118186306,+ | |||
}} |
Latest revision as of 18:45, 23 July 2015
Short description: | p@chr11:118186284..118186306, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:118186284..118186306, + |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.60e-20 | 3 |
pro-NK cell | 1.60e-20 | 3 |
mature alpha-beta T cell | 3.37e-09 | 18 |
alpha-beta T cell | 3.37e-09 | 18 |
immature T cell | 3.37e-09 | 18 |
mature T cell | 3.37e-09 | 18 |
immature alpha-beta T cell | 3.37e-09 | 18 |
T cell | 4.15e-09 | 25 |
pro-T cell | 4.15e-09 | 25 |
lymphoid lineage restricted progenitor cell | 6.13e-09 | 52 |
lymphocyte | 9.60e-09 | 53 |
common lymphoid progenitor | 9.60e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
lymph node | 3.34e-08 | 1 |
thymus | 6.00e-08 | 4 |
hemolymphoid system gland | 6.00e-08 | 4 |
thymic region | 6.00e-08 | 4 |
pharyngeal gland | 6.00e-08 | 4 |
thymus primordium | 6.00e-08 | 4 |