FFCP PHASE1:Hg19::chr11:2154106..2154118,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-99bp_to_CU674261_5end | |||
|cluster_id=chr11:2154106..2154118,+ | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_3_at_CU674261_5end | |||
|id=chr11:2154106..2154118,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;4.90e-25;19!CL:0002541;1.74e-11;3!CL:0002575;1.03e-08;2!CL:0002536;1.59e-08;2!CL:0002549;2.61e-07;2!CL:0002537;3.63e-07;5!CL:0000182;5.69e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.55e-25,19;CL:0002541,2.35e-11,3;CL:0002575,1.03e-08,2;CL:0002536,1.59e-08,2;CL:0002549,3.08e-07,2;CL:0002537,3.56e-07,5;CL:0000182,5.62e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.57e-08;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.27e-13!14;UBERON:0000158!1.27e-13!14;UBERON:0000478!2.83e-12!24;UBERON:0003124!5.01e-10!7;UBERON:0000481!4.66e-09!347;UBERON:0004119!8.55e-08!169;UBERON:0000925!8.55e-08!169;UBERON:0006595!8.55e-08!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.60e-26;24!UBERON:0005631;2.61e-22;10!UBERON:0000158;2.61e-22;10!UBERON:0000305;4.07e-13;7!UBERON:0003124;1.74e-11;3!UBERON:0000920;1.74e-11;3!UBERON:0001987;2.18e-08;4!UBERON:0002107;6.30e-08;19!UBERON:0006925;6.30e-08;19!UBERON:0005629;2.61e-07;2!UBERON:0005358;2.61e-07;2!UBERON:0001886;2.61e-07;2!UBERON:0004086;2.61e-07;2!UBERON:0005282;2.61e-07;2!UBERON:0005281;2.61e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.49e-29,14;UBERON:0000158,7.49e-29,14;UBERON:0000478,5.51e-26,24;UBERON:0003124,1.46e-17,7;UBERON:0000305,3.98e-13,7;UBERON:0004871,1.95e-11,8;UBERON:0000920,2.35e-11,3;UBERON:0001987,2.45e-08,4;UBERON:0004340,2.45e-08,4;UBERON:0002107,6.75e-08,19;UBERON:0006925,6.75e-08,19;UBERON:0008836,6.75e-08,19;UBERON:0005629,3.08e-07,2;UBERON:0005358,3.08e-07,2;UBERON:0001886,3.08e-07,2;UBERON:0004086,3.08e-07,2;UBERON:0005282,3.08e-07,2;UBERON:0005281,3.08e-07,2 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,12.2327168392896,8.17677632508206,0.495065411840187,1.32558950291166,0,0,0,0,0,1.63200552995402,1.56727360739044,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01392563272577,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21085942115945,1.15235184896,0.468642863667593,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0.464775771478074,0.310983165046111,0.252320850875628,0,0,0,0,3.25057549622385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0,0,6.76436411987125,0.171567810298526,0,0,0,0.277765335475589,0.651616610620649,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.87192013766656,0.1466765716419,0,0,0,0,0,0.771622122786426,1.41849132023278,0.799266537048298,1.14382394926518,14.650783345569,2.46972101034231,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,2.08575535922538,0.500170521059677,0.271265023699736,2.70362119990049,0.713715955188647,2.05013139544115,1.17141414992713,0,0,0,0,0.184369168541703,0,16.2514960694075,18.1866014619754,0,0,0,0.909382714338778,4.99306318531491,6.35019615992329,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0,0,0,4.23008073570678,0,0,0.114814448164607,0,0.131124414959424,0,0.231046011313244,0,0,0.105551628892876,0,0,0,1.54227252690289,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0.48335359146061,0,0,0.137836572484531,0,0.145016693914229,0.340906509664404,7.74578710126615,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0.632758849437452,0.38126038784765,0,0.855877976067841,0,0,0.719489830333259,0,0.117812402345686,0,0,0,2.92580243453754,0,0,0.818999468447914,0,0,0,0,0,0,0,0,0,0,0,0.982490410131212,0,0,0,0.658589785919804,0.379473173765715,0,0,0,0,0.659006605437454,0.86101074534246,0,2.21715076768338,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,8.35605696581915,5.04839957415486,7.6790175524808,0,0,0,0,0.63337622438398,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0.69169171316418,0,0,13.7170498684725,1.09917112082235,21.854425816764,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,0,0,0,0,0,0,0,8.02577647298789,0.234264445725339,0,0,0.242780379534093,0,0,0.30607276163049,1.13735843331278,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,2.25980740780532,0,0,0,0,0,0.213452994739353,1.9980960958213,0,0,7.37858490806448,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.399358000997982,0,0,1.41085292222125,0.360299883542404,0,3.78159275074674,3.04938676010316,3.70719491198017,3.05125192695721,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.681909645754975,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,6.62534444561107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72022758707021,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20008329398946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0.3062454773532,0.128458450192919,0,0,0,0.252071696221718,0,0,0,0,0.11796972334774,0,0,0,0,1.5913297769302,0.0752103283492573,0,0.781514011233092,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0,1.1531308121143,0,0,0.0679697329768317,0.0657727735628491,0,0,0.156986185701028,0,0.280272163313789,0.913158720509496,0,0,0.285906176706625,0,0,3.65102371835417,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0.853425474875886,0.647428837187895,0.102662806856247,9.27851545070559,0,0,2.38740930193642,0,0,0,0,0,1.09279780251979,0,0,0,0.785233868459781,0,0.8453114551668,0,0,0.257831551894309,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0.0679914901909147,0.436350690340377,0.5290268405154,0,0,0.432626562123789,0,0,0,0,0,0,0,0.378893491091197,0,0.829169439458779,0,0,3.57096647195611,0,0.558672428662721,0,0,1.41482032270754,0.217716747896961,13.0048654412407,0.26940821205835,0,0.99798106963804,0.162806537221949,0,0,2.0659796484515,2.34640942403454,0,0,0,0,0 | |||
|short_description=p3@CU674261 | |||
}} |
Latest revision as of 21:01, 23 July 2015
Short description: | p3@CU674261 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CU674261_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -99bp_to_CU674261_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.55e-25 | 19 |
chorionic membrane mesenchymal stem cell | 2.35e-11 | 3 |
central nervous system pericyte | 1.03e-08 | 2 |
amniotic epithelial cell | 1.59e-08 | 2 |
fibroblast of choroid plexus | 3.08e-07 | 2 |
amnion mesenchymal stem cell | 3.56e-07 | 5 |
hepatocyte | 5.62e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.49e-29 | 14 |
membranous layer | 7.49e-29 | 14 |
extraembryonic structure | 5.51e-26 | 24 |
chorion | 1.46e-17 | 7 |
amnion | 3.98e-13 | 7 |
somatic layer of lateral plate mesoderm | 1.95e-11 | 8 |
egg chorion | 2.35e-11 | 3 |
placenta | 2.45e-08 | 4 |
allantois | 2.45e-08 | 4 |
liver | 6.75e-08 | 19 |
digestive gland | 6.75e-08 | 19 |
liver bud | 6.75e-08 | 19 |
vascular plexus | 3.08e-07 | 2 |
ventricle of nervous system | 3.08e-07 | 2 |
choroid plexus | 3.08e-07 | 2 |
brain ventricle | 3.08e-07 | 2 |
ventricular system of brain | 3.08e-07 | 2 |
ventricular system of central nervous system | 3.08e-07 | 2 |