FFCP PHASE1:Hg19::chr8:123683812..123683837,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:123683812..123683837,-
|short_description=p@chr8:123683812..123683837,-
|description=CAGE_peak_at_chr8:123683812..123683837,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:123683812..123683837,- | |||
|coexpression_cluster_id=C528 | |||
|description=CAGE_peak_at_chr8:123683812..123683837,- | |||
|id=chr8:123683812..123683837,- | |||
|ontology_enrichment_celltype=CL:0002076!6.03e-21!43;CL:0002159!1.95e-16!13;CL:0002368!8.58e-16!13;CL:0000244!3.49e-14!4;CL:0000731!3.49e-14!4;CL:0000223!4.84e-14!59;CL:0000066!1.18e-12!254;CL:0002166!4.98e-12!3;CL:0002621!6.39e-12!3;CL:0002251!2.91e-11!21;CL:0002328!4.48e-11!3;CL:0000622!4.57e-11!5;CL:0000362!1.01e-10!8;CL:0002144!1.27e-10!3;CL:0002202!1.12e-09!9;CL:0002632!1.12e-09!9;CL:0000240!3.09e-09!6;CL:0000311!3.09e-09!6;CL:0000079!3.09e-09!6;CL:0000237!3.09e-09!6;CL:0000036!3.09e-09!6;CL:0000357!3.09e-09!6;CL:0000114!3.09e-09!6;CL:0000154!3.16e-09!6;CL:0000220!7.04e-09!246;CL:0002321!9.66e-09!248;CL:0002077!1.04e-08!33;CL:0000317!2.50e-08!2;CL:1000448!2.50e-08!2;CL:0002308!2.50e-08!2;CL:0002140!2.50e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002166;7.73e-25;3!CL:0002621;1.58e-24;3!CL:0002159;8.25e-20;14!CL:0000244;1.81e-17;4!CL:0000731;1.81e-17;4!CL:0000317;1.27e-16;2!CL:1000448;1.27e-16;2!CL:0002308;1.27e-16;2!CL:0002140;1.27e-16;2!CL:0002368;1.02e-14;13!CL:0002202;7.77e-14;9!CL:0002632;7.77e-14;9!CL:0000307;2.15e-11;3!CL:0002328;5.70e-11;3!CL:0002327;1.90e-08;4!CL:0002076;2.50e-08;42!CL:0000362;2.87e-08;9!CL:0002077;3.23e-07;34!CL:0000622;3.57e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,8.06e-25,3;CL:0002621,1.40e-24,3;CL:0002159,1.04e-19,14;CL:0000244,1.18e-17,4;CL:0000731,1.18e-17,4;CL:0000317,1.37e-16,2;CL:1000448,1.37e-16,2;CL:0002308,1.37e-16,2;CL:0002140,1.37e-16,2;CL:0002368,8.60e-15,13;CL:0002202,6.35e-14,9;CL:0002632,6.35e-14,9;CL:0000068,2.04e-11,3;CL:0000069,2.04e-11,3;CL:0000307,2.04e-11,3;CL:0000377,2.04e-11,3;CL:0002328,4.42e-11,3;CL:0002076,7.44e-11,42;CL:0000066,8.87e-10,253;CL:0002327,1.77e-08,4;CL:0000362,3.38e-08,9;CL:0002077,7.96e-08,34;CL:0000223,1.47e-07,58;CL:0000622,3.68e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.85e-23;3!CL:0000377;2.15e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!6.39e-12!3;UBERON:0000365!2.35e-11!5;UBERON:0004815!4.48e-11!3;UBERON:0002031!4.48e-11!3;UBERON:0001915!1.27e-10!3;UBERON:0001982!1.27e-10!3;UBERON:0005910!1.83e-09!6;UBERON:0001004!2.57e-09!72;UBERON:0001708!4.14e-09!4;UBERON:0001704!4.14e-09!4;UBERON:0002185!2.10e-08!4;UBERON:0002419!2.50e-08!2;UBERON:0007771!2.50e-08!2;UBERON:0003297!2.50e-08!2;UBERON:0001821!2.50e-08!2;UBERON:0003487!2.50e-08!2;UBERON:0001820!2.50e-08!2;UBERON:0005089!2.50e-08!2;UBERON:0005088!2.50e-08!2;UBERON:0000178!1.87e-07!15;UBERON:0000179!1.87e-07!15;UBERON:0000463!1.87e-07!15;UBERON:0000166!6.93e-07!21;UBERON:0004119!8.21e-07!169;UBERON:0000925!8.21e-07!169;UBERON:0006595!8.21e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.58e-24;3!UBERON:0000486;1.02e-22;12!UBERON:0001708;8.74e-19;4!UBERON:0008895;8.74e-19;4!UBERON:0002419;1.27e-16;2!UBERON:0007771;1.27e-16;2!UBERON:0003297;1.27e-16;2!UBERON:0001821;1.27e-16;2!UBERON:0003487;1.27e-16;2!UBERON:0001820;1.27e-16;2!UBERON:0011159;3.83e-15;5!UBERON:0000365;4.27e-14;5!UBERON:0002037;4.97e-12;6!UBERON:0005910;7.68e-12;6!UBERON:0004815;5.70e-11;3!UBERON:0002031;5.70e-11;3!UBERON:0003929;7.79e-11;7!UBERON:0005911;4.48e-10;36!UBERON:0003350;1.53e-09;8!UBERON:0001828;1.53e-09;8!UBERON:0004807;1.07e-08;22!UBERON:0010371;1.13e-08;31!UBERON:0001911;1.90e-08;4!UBERON:0007196;2.29e-08;15!UBERON:0001558;2.29e-08;15!UBERON:0002680;3.46e-08;9!UBERON:0001895;3.46e-08;9!UBERON:0011137;3.85e-07;11!UBERON:0010323;3.85e-07;11!UBERON:0002185;6.37e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.40e-24,3;UBERON:0001708,9.02e-19,4;UBERON:0008895,9.02e-19,4;UBERON:0002419,1.37e-16,2;UBERON:0007771,1.37e-16,2;UBERON:0003297,1.37e-16,2;UBERON:0001821,1.37e-16,2;UBERON:0003487,1.37e-16,2;UBERON:0001820,1.37e-16,2;UBERON:0005089,1.37e-16,2;UBERON:0005088,1.37e-16,2;UBERON:0011159,3.93e-15,5;UBERON:0000365,3.04e-14,5;UBERON:0010188,1.06e-12,6;UBERON:0002539,1.06e-12,6;UBERON:0008816,1.06e-12,6;UBERON:0005910,5.79e-12,6;UBERON:0002037,6.99e-12,6;UBERON:0006215,6.99e-12,6;UBERON:0004815,4.42e-11,3;UBERON:0002031,4.42e-11,3;UBERON:0003350,1.47e-09,8;UBERON:0001828,1.47e-09,8;UBERON:0001911,1.77e-08,4;UBERON:0005333,1.77e-08,4;UBERON:0008425,1.77e-08,4;UBERON:0005311,1.77e-08,4;UBERON:0007196,2.03e-08,15;UBERON:0001558,2.03e-08,15;UBERON:0002680,4.33e-08,9;UBERON:0001895,4.33e-08,9;UBERON:0010092,4.33e-08,9;UBERON:0010323,3.90e-07,11;UBERON:0002185,5.48e-07,5;UBERON:0010371,5.73e-07,104;UBERON:0004807,8.03e-07,28 | |||
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| ||
|short_description=p@chr8:123683812..123683837,- | |||
}} | }} |
Latest revision as of 14:31, 31 July 2015
Short description: | p@chr8:123683812..123683837, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:123683812..123683837, - |
Coexpression cluster: | C528_Gingival_Mallassezderived_Keratinocyte_Sebocyte_Prostate_Urothelial_Small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 8.06e-25 | 3 |
gingival epithelial cell | 1.40e-24 | 3 |
general ecto-epithelial cell | 1.04e-19 | 14 |
transitional epithelial cell | 1.18e-17 | 4 |
urothelial cell | 1.18e-17 | 4 |
sebum secreting cell | 1.37e-16 | 2 |
epithelial cell of sweat gland | 1.37e-16 | 2 |
epithelial cell of skin gland | 1.37e-16 | 2 |
acinar cell of sebaceous gland | 1.37e-16 | 2 |
respiratory epithelial cell | 8.60e-15 | 13 |
epithelial cell of tracheobronchial tree | 6.35e-14 | 9 |
epithelial cell of lower respiratory tract | 6.35e-14 | 9 |
duct epithelial cell | 2.04e-11 | 3 |
branched duct epithelial cell | 2.04e-11 | 3 |
tracheal epithelial cell | 2.04e-11 | 3 |
tracheoblast | 2.04e-11 | 3 |
bronchial epithelial cell | 4.42e-11 | 3 |
endo-epithelial cell | 7.44e-11 | 42 |
epithelial cell | 8.87e-10 | 253 |
mammary gland epithelial cell | 1.77e-08 | 4 |
epidermal cell | 3.38e-08 | 9 |
ecto-epithelial cell | 7.96e-08 | 34 |
endodermal cell | 1.47e-07 | 58 |
acinar cell | 3.68e-07 | 5 |