FFCP PHASE1:Hg19::chr11:65638757..65638772,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=30008 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3219 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-84bp_to_ENST00000527969_5end | |||
|cluster_id=chr11:65638757..65638772,- | |||
|coexpression_cluster_id=C1000 | |||
|description=CAGE_peak_4_at_EFEMP2_5end | |||
|id=chr11:65638757..65638772,- | |||
|ontology_enrichment_celltype=CL:0000055!1.46e-31!180;CL:0000057!8.32e-19!75;CL:0000183!1.96e-14!59;CL:0000222!5.05e-14!119;CL:0000680!1.07e-13!57;CL:0000056!1.07e-13!57;CL:0000355!1.07e-13!57;CL:0000187!1.24e-12!54;CL:0000393!4.38e-12!60;CL:0000211!4.38e-12!60;CL:0000192!1.01e-11!42;CL:0000514!1.01e-11!42;CL:0000359!5.08e-10!32;CL:0002334!4.00e-07!12;CL:0000220!4.29e-07!246;CL:0002321!4.66e-07!248;CL:0002620!7.73e-07!23;CL:0000144!9.81e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000134;3.37e-10;55!CL:0000048;2.06e-09;58!CL:0002334;4.56e-09;12!CL:0000723;6.92e-09;61!CL:0000192;6.97e-09;43!CL:0000359;9.83e-09;32!CL:0002320;1.24e-08;188!CL:0000057;2.64e-08;73!CL:0002620;5.07e-07;23!CL:0000187;9.17e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.44e-21,76;CL:0000222,7.16e-14,121;CL:0000048,3.33e-13,427;CL:0000723,2.22e-12,433;CL:0000680,3.16e-12,58;CL:0000056,3.16e-12,58;CL:0000355,3.16e-12,58;CL:0000187,1.65e-11,55;CL:0000034,2.46e-11,441;CL:0000192,2.76e-11,43;CL:0000514,2.76e-11,43;CL:0000393,7.99e-10,61;CL:0000211,7.99e-10,61;CL:0002334,3.55e-09,12;CL:0000359,1.01e-08,32;CL:0002620,5.78e-07,23;CL:0002320,7.39e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000514;6.97e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;6.42e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.56e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.11e-16!83;UBERON:0002329!1.11e-16!83;UBERON:0003077!1.11e-16!83;UBERON:0003059!1.11e-16!83;UBERON:0007282!1.11e-16!83;UBERON:0009618!1.11e-16!83;UBERON:0007285!1.11e-16!83;UBERON:0004290!1.39e-14!70;UBERON:0004872!1.44e-13!84;UBERON:0005256!4.85e-13!143;UBERON:0001134!6.22e-13!61;UBERON:0002036!6.22e-13!61;UBERON:0003082!6.22e-13!61;UBERON:0000486!7.57e-13!82;UBERON:0002385!9.22e-13!63;UBERON:0001015!9.22e-13!63;UBERON:0000383!9.22e-13!63;UBERON:0002049!6.60e-12!79;UBERON:0007798!6.60e-12!79;UBERON:0001637!1.58e-11!42;UBERON:0003509!1.58e-11!42;UBERON:0004572!1.58e-11!42;UBERON:0001981!5.78e-10!60;UBERON:0007500!5.78e-10!60;UBERON:0004537!5.78e-10!60;UBERON:0006965!5.78e-10!60;UBERON:0000475!8.31e-10!365;UBERON:0002100!1.07e-09!216;UBERON:0004573!1.40e-09!33;UBERON:0004571!1.40e-09!33;UBERON:0000055!1.76e-09!69;UBERON:0004535!2.90e-09!110;UBERON:0003914!2.93e-09!118;UBERON:0001009!3.05e-09!113;UBERON:0000468!2.16e-08!659;UBERON:0000490!3.37e-07!138;UBERON:0000481!7.04e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.38e-10;33!UBERON:0004571;5.38e-10;33!UBERON:0001637;3.49e-09;42!UBERON:0003509;3.49e-09;42!UBERON:0004572;3.49e-09;42!UBERON:0002384;6.66e-08;198!UBERON:0000947;7.47e-07;21!UBERON:0010191;7.47e-07;21!UBERON:0004457;9.43e-07;9!UBERON:0000042;9.43e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,3.14e-14,78;UBERON:0007524,1.22e-12,73;UBERON:0002329,2.07e-12,71;UBERON:0003059,2.07e-12,71;UBERON:0007282,2.07e-12,71;UBERON:0004290,2.07e-12,71;UBERON:0009618,2.07e-12,71;UBERON:0003077,4.93e-12,72;UBERON:0007285,4.93e-12,72;UBERON:0001637,7.13e-12,42;UBERON:0003509,7.13e-12,42;UBERON:0004572,7.13e-12,42;UBERON:0001134,1.93e-11,62;UBERON:0002036,1.93e-11,62;UBERON:0003082,1.93e-11,62;UBERON:0004573,4.94e-11,33;UBERON:0004571,4.94e-11,33;UBERON:0005256,8.01e-11,122;UBERON:0000486,8.56e-11,83;UBERON:0002385,1.11e-10,64;UBERON:0001015,1.11e-10,64;UBERON:0000383,1.11e-10,64;UBERON:0003104,1.61e-10,160;UBERON:0009142,1.61e-10,160;UBERON:0004872,3.15e-10,83;UBERON:0002049,3.55e-09,78;UBERON:0007798,3.55e-09,78;UBERON:0000926,2.25e-08,315;UBERON:0004120,2.25e-08,315;UBERON:0006603,2.25e-08,315;UBERON:0004535,4.25e-08,109;UBERON:0003914,4.86e-08,117;UBERON:0007500,6.06e-08,59;UBERON:0001981,6.06e-08,59;UBERON:0004537,6.06e-08,59;UBERON:0006965,6.06e-08,59;UBERON:0001009,6.53e-08,112;UBERON:0000055,3.94e-07,68;UBERON:0000490,4.92e-07,148;UBERON:0002199,8.03e-07,46;UBERON:0002416,8.03e-07,46;UBERON:0000947,9.24e-07,21;UBERON:0010191,9.24e-07,21 | |||
|phase1_expression=5.08699461957559,15.6293382440418,7.04772020479856,15.0109947529696,18.3254048715188,25.2978171989107,12.6649939084155,0.631719873426831,0.522371256399677,0.491467873003018,4.18680700783456,0,1.84636884759917,1.36142988256051,5.63375538737457,10.7572023432284,7.8350288643117,10.9546513558106,6.34312638427659,0.738726348460727,4.08001382488506,2.82109249330279,0,2.18999080116615,4.01736446703369,0,0,0,0,0,0.154816123316076,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,3.35350429851818,0.767175371061182,1.80719576192283,2.50668955317945,9.12533069453189,0,7.78615792484217,1.13441780596881,5.32150553910154,0.966182642624386,0.327447688744282,0.364295288292542,0,0,0,0.26591592103773,0,0,0,0,0,1.04142150482278,1.13061588384802,1.67799774483962,3.30141650328081,0.626984899610432,0.258416759169329,0,0,1.20848795132744,0,4.88124115096339,0,6.48113558305408,0.892997282840798,0.673588117878509,0.225222960966644,0,0,0.549605231791222,0,0,0,3.97577561356255,5.31848148991235,1.05927344650575,25.8152958673932,3.90135220418193,7.28880880184999,1.06748995729705,10.853372130355,0.622422070799533,2.96363478553314,4.08654757783647,2.11900398702904,8.06646294271999,0,3.1216007683032,0,3.28787097213962,0.469737994575059,0.647491777472526,0.702254033511242,0,2.08818339430006,2.06651562351531,9.50402285825643,24.4794259985771,0.910161361938026,5.03032699271367,0.336672227908132,0.875829639103749,0.277064115484183,4.38977620880838,15.017901994152,12.1692827714343,1.70148274740032,8.43131287737651,3.84403299873421,2.54318281391474,9.60291507470087,4.225153698776,4.63752972082133,4.28068769562657,2.36286865137773,4.67697624773753,4.29137416214995,3.03764665519588,4.68773564774555,11.7153165530483,4.23158812556089,1.18692414617341,0.386521706326594,0.272746120590835,0,0.243947412259191,0.132529768321485,0.580969714347592,0.10366105501537,0.756962552626885,0,10.9514672630871,34.0917697242229,2.76269842704961,5.57241513638375,7.21879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,1.2347220339942,4.41026134156626,0,0,2.36315962672562,0,0,0.343135620597051,0,0,0,0.370353780634118,0.325808305310325,0,1.44331342025273,0.463721619900307,0.234817388471643,1.01056513432752,0.925971025153221,1.90254152234598,0,0,0,0,0,0,1.00789276919316,0.141775097242386,0,0,0,0,0,0.414656231081544,0.288239906833923,0.25248486685276,0,0,0,1.71072446022705,0.411309970813294,0.600686115687835,0,0.336393253036082,0,1.0267360014933,3.87815147273333,14.3062578340753,1.690605505112,4.78688609852767,9.36066932202295,0.257207374262142,0,3.72991050622539,2.28764789853036,3.7983512377401,0,0.325736184293735,2.84313558994037,1.58390374586686,4.52159065589379,1.74306691720059,6.99810938274399,0,0,0,2.87549826589899,8.04033550838797,0,4.92256442669769,9.24643451476725,0.895304816199478,0,0,0,0,0.254094624222463,1.30139853857622,1.54657762555539,0.167516265334349,0.637938751653163,0,0,0,2.4538298343828,6.5022167737758,3.25518028439683,2.28767947683888,11.2410262942212,6.30809660135739,5.38850508966481,1.80567659836631,52.3037259328765,10.3473071292505,0.664225598535437,2.94990669666725,3.38846096425523,4.30762546418029,12.3531632571908,0,0,0,0.909382714338778,1.66435439510497,2.41912234663744,5.21026396419431,1.99500565274481,23.8561080268113,8.96974044789907,2.55853624533352,4.50390979202101,25.2310712956485,3.54682295746108,7.63515418846446,1.06765302817952,5.71179872101983,7.55367459989735,0,3.20810352485256,0.368323955743585,3.21480454860899,9.83292307236272,18.7507913391977,0,0.15403067420883,0,1.46139224653261,0.633309773357254,1.13733384070897,1.53084334748864,0.647747748306418,4.62681758070868,1.08378575017541,5.01689773854853,0,0,1.56712328305525,0,0,0.512900250232778,1.31205858279882,0.325378394664303,0.206082023295445,0.54941678891006,0.330037999682352,0,0.650060246036521,9.64103579064957,1.54673149267395,2.61882649094895,2.45605879561807,2.20538515975249,0.966782203814463,3.33538396002726,1.02271952899321,0.712256285173899,0.165284915360978,0.384380134730212,0,0.10115778085555,9.761756535243,11.6480568327337,0.6970372701606,0.308033580176089,1.59691809095107,1.73986598415015,0.9266210955196,3.2918723950658,1.116475108079,0,5.3376454298671,1.02359116524534,3.42351190427136,0.318203247925937,5.49464048139461,1.07923474549989,4.66712950551293,3.06312246098785,1.01091240786658,6.34041284692033,3.79132610615083,1.46290121726877,11.6982475023017,7.39551027297288,2.18399858252777,12.5850834438804,4.52032466480971,1.10273068709225,13.2687795048244,11.8381739018516,0,0.655894752046633,0.608731130888112,3.0982349809975,2.53526042279017,0.573645408816206,0.491245205065606,0.7133421029625,2.48332744849418,16.0441802826225,14.8182701831956,1.13841952129715,4.19921664293979,0.0962221127255121,0.670302275535787,0,0.376575203107117,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0.95497793895076,1.18785872333055,0.307160702099232,0,0.281338832821026,0.667852230137435,0,0,2.19172787076177,0.552567831062295,0,0.20453736500431,0.123084805461069,4.0435146396035,0,0,0,0.789147245095469,0,0,0.969332746095218,0.278304294485554,0,0,0,1.44999915086959,0,0,0,0,0,0.694499979733169,0,0.361789315876224,0,0.110579259931225,0.295547618953547,0.87754158861589,0,0.139423744278603,1.92375646259493,0,0,0,0,0.31900115973192,3.20591576906518,0.533034776018635,0,0,0,0,0,0,0,0,2.3209787098083,0,0,0,0.995261931078505,0.530745387020035,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0.468528891450678,0,0,0,1.18375320854817,0,0,0.695052375913368,0,0,0,0,0.313932918407225,0,0,0.277349346026277,0.173559738335131,0,0,0.698906672968121,0.51595809741485,0,0,0,0.969890164884194,0.441280633457501,1.80784592624426,0.137041924646751,0,0,0,0.0801588202515337,1.06726497369676,0.19980960958213,0,0.114536596165916,0.514784993585894,0,0.248505071130865,0,0,0.523014231561666,0.101998217636322,0,0,0,0,10.7441360354989,0.525774708558629,2.23425921017803,0.458320848023367,0,0.798716001995964,1.71690419254628,0,0.403100834920358,1.80149941771202,0,0,0.0824158583811665,0,0,0,0,0.681017030557878,0.321506296930038,0,0.83088067605837,0,0,0.182248669974074,0,0.236417121897595,0.314727528809989,0.422401346077626,0,0,2.85878130549347,0.662091970365432,0.25426853765475,22.8059832736559,17.2844298240254,18.6154795262363,0,0,3.06698439213759,0.226624183040251,0.146552233678082,0,0,0.26446520348538,0,0,0.106787412567695,0.157204305099666,1.24271716604159,1.48849806543585,0,0,0,0.544017803369474,0.7520696820681,0.306345576763462,0.655745261419609,0,0,0.122026264901963,0.625954653532499,1.72022758707021,0.443716206147409,0.248385611765534,0.276697269872462,0,0,0,3.05845565607623,0,0,1.04478362020812,2.80455971816669,3.32883516901568,3.03044808440143,2.26411111577318,8.00830099436882,4.11912123114462,4.68815863666041,2.64243240990727,1.92211694986524,2.54874827461924,4.94783423379965,2.48420731002015,3.31764966272684,3.98762571836992,8.86966605079948,6.76159240487483,7.9969094555447,2.44122439922797,1.81848659202559,2.47044281197723,7.88857391793439,9.55430132876678,10.8007496459051,5.83772698810748,6.39824028655246,0,0,0.428883182749851,1.82696004375648,2.04035332961045,0.463044948647668,2.69210374957114,1.96997725189636,2.16161013012681,3.28926074368061,3.00371548107998,1.3503982678964,1.01365464391844,0,0,0,0.138258436151731,0.194860308839388,0,0,0.655219697692825,0.737318726261158,0,0,0,0,0.567515953566836,0,0.139879507719444,0,0.127894371303652,0,0.471797825567689,0.109209638192014,0.33946505990805,0.637724760305049,1.11542187833102,0,1.90802610392051,0,0,11.2856301981019,15.0060283903068,0.192687675289379,0,0.478901577171454,0,0.504143392443436,0.138314504928436,0.807378228159255,0,0,0,0,0,2.288292572803,0,0.198916222116275,0.526472298444801,0.20170506870352,0,0,0.327543835020193,0,0.0675375846183947,0,0.413373593002368,0,0.546974809018219,0,2.97726707033577,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0.135939465953663,0.131545547125698,0,0,0.78493092850514,0.314231179832004,0,0.913158720509496,0.215927591218621,1.43325506366115,0.500335809236594,0.158013611732727,0,0,0,0.207216164163037,0.51215543128185,0,0,0.354996002191696,0.426067023795788,1.69354820076372,0.68732060563215,0.31020638566432,0,0,0,0,0,0,3.4794432940146,1.45713297917742,0,0,0.237840181555137,0,0,0,0.0771741581079447,1.31135736302374,0,0.735444965261716,0,1.17785080268967,0.297046400327086,1.6906229103336,1.18948980281472,0.187967835959707,0.257831551894309,0,0,0,0,0,1.37618785021362,0.430018749454354,0.315543124386369,0.135982980381829,0.436350690340377,2.645134202577,25.6676562535058,22.1844301743081,19.9008218576943,0.126166424835079,0,1.0135880080915,0.101988829741982,0,0,0.250707539292375,0.909344378618873,0,0,0,0.639701945702943,2.3806443146374,0,0.186224142887574,0.33639558774184,0.891060215894309,1.41482032270754,2.17716747896961,1.36893320434112,0.0673520530145875,0.215166616178029,1.33064142618405,0,0.213454691755431,0,0,2.34640942403454,0.488965776731466,1.22068853494722,0.665756774185513,0.805095174364105,0 | |||
|short_description=p4@EFEMP2 | |||
}} |
Latest revision as of 11:45, 19 September 2015
Short description: | p4@EFEMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EFEMP2_5end |
Coexpression cluster: | C1000_Osteoblast_Preadipocyte_Hair_Adipocyte_tenocyte_Mesenchymal_leiomyoma |
Association with transcript: | -84bp_to_ENST00000527969_5end |
EntrezGene: | EFEMP2 |
HGNC: | 3219 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.44e-21 | 76 |
mesodermal cell | 7.16e-14 | 121 |
multi fate stem cell | 3.33e-13 | 427 |
somatic stem cell | 2.22e-12 | 433 |
muscle precursor cell | 3.16e-12 | 58 |
myoblast | 3.16e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.16e-12 | 58 |
muscle cell | 1.65e-11 | 55 |
stem cell | 2.46e-11 | 441 |
smooth muscle cell | 2.76e-11 | 43 |
smooth muscle myoblast | 2.76e-11 | 43 |
electrically responsive cell | 7.99e-10 | 61 |
electrically active cell | 7.99e-10 | 61 |
preadipocyte | 3.55e-09 | 12 |
vascular associated smooth muscle cell | 1.01e-08 | 32 |
skin fibroblast | 5.78e-07 | 23 |
connective tissue cell | 7.39e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.56e-08 | 14 |