FFCP PHASE1:Hg19::chr8:128747709..128747723,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:128747709..128747723,+
|short_description=p20@MYC
|description=CAGE_peak_20_at_MYC_5end
|association_with_transcript=29bp_to_ENST00000259523_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4609 | |EntrezGene=4609 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7553 | |HGNC=7553 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_ENST00000259523_5end | |||
|cluster_id=chr8:128747709..128747723,+ | |||
|description=CAGE_peak_20_at_MYC_5end | |||
|id=chr8:128747709..128747723,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.25e-14!254;CL:0002076!1.66e-08!43;CL:0000223!3.47e-08!59;CL:0000063!2.26e-07!578;CL:0000012!2.35e-07!682;CL:0000548!7.15e-07!679;CL:0000004!7.15e-07!679;CL:0000255!7.15e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000307;3.81e-15;3!CL:0002202;2.40e-13;9!CL:0002632;2.40e-13;9!CL:0002159;5.02e-12;14!CL:0000317;2.97e-11;2!CL:1000448;2.97e-11;2!CL:0002308;2.97e-11;2!CL:0002140;2.97e-11;2!CL:0000622;1.96e-09;5!CL:0000362;3.56e-09;9!CL:0002368;3.77e-09;13!CL:0002076;2.81e-08;42!CL:0000240;4.11e-08;6!CL:0000311;4.11e-08;6!CL:0000079;4.11e-08;6!CL:0000237;4.11e-08;6!CL:0000154;6.28e-08;6!CL:0002251;6.79e-08;20!CL:0002328;1.74e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,8.01e-15,3;CL:0000069,8.01e-15,3;CL:0000307,8.01e-15,3;CL:0000377,8.01e-15,3;CL:0002202,3.51e-13,9;CL:0002632,3.51e-13,9;CL:0002159,3.60e-12,14;CL:0002076,1.87e-11,42;CL:0000317,2.98e-11,2;CL:1000448,2.98e-11,2;CL:0002308,2.98e-11,2;CL:0002140,2.98e-11,2;CL:0000622,1.78e-09,5;CL:0000223,3.21e-09,58;CL:0000362,3.42e-09,9;CL:0002368,4.87e-09,13;CL:0000240,3.97e-08,6;CL:0000311,3.97e-08,6;CL:0000079,3.97e-08,6;CL:0000237,3.97e-08,6;CL:0000036,3.97e-08,6;CL:0000357,3.97e-08,6;CL:0000114,3.97e-08,6;CL:0000154,5.80e-08,6;CL:0002251,6.55e-08,20;CL:0002328,1.69e-07,3;CL:0000817,2.63e-07,3;CL:0000066,8.26e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000377;3.81e-15;3!CL:0000357;4.11e-08;6!CL:0000114;4.11e-08;6 | |||
|ontology_enrichment_disease=DOID:14566!2.96e-13!239;DOID:162!2.97e-13!235;DOID:305!3.28e-11!106;DOID:2531!8.46e-09!51;DOID:0060083!8.46e-09!51;DOID:0050687!3.79e-08!143;DOID:1240!2.78e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.86e-10;31!DOID:1240;5.65e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.16e-10,31;DOID:1240,3.44e-10,39;DOID:2531,6.00e-09,51;DOID:0060083,6.00e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0001004!4.71e-11!72;UBERON:0000072!5.68e-10!46;UBERON:0000065!2.28e-09!53;UBERON:0004119!3.70e-09!169;UBERON:0000925!3.70e-09!169;UBERON:0006595!3.70e-09!169;UBERON:0008947!1.33e-08!38;UBERON:0003258!1.33e-08!38;UBERON:0001007!3.36e-07!155;UBERON:0001555!3.36e-07!155;UBERON:0007026!3.36e-07!155;UBERON:0005911!3.46e-07!82;UBERON:0001041!4.97e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;2.97e-11;2!UBERON:0007771;2.97e-11;2!UBERON:0003297;2.97e-11;2!UBERON:0001821;2.97e-11;2!UBERON:0003487;2.97e-11;2!UBERON:0001820;2.97e-11;2!UBERON:0007196;6.89e-08;15!UBERON:0001558;6.89e-08;15!UBERON:0004815;1.74e-07;3!UBERON:0002031;1.74e-07;3!UBERON:0003126;9.74e-07;7!UBERON:0001005;9.74e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,2.98e-11,2;UBERON:0007771,2.98e-11,2;UBERON:0003297,2.98e-11,2;UBERON:0001821,2.98e-11,2;UBERON:0003487,2.98e-11,2;UBERON:0001820,2.98e-11,2;UBERON:0005089,2.98e-11,2;UBERON:0005088,2.98e-11,2;UBERON:0007196,8.56e-08,15;UBERON:0001558,8.56e-08,15;UBERON:0004815,1.69e-07,3;UBERON:0002031,1.69e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,1.89515962028049,0,0.245733936501509,0,0,0.263766978228454,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.916960868975415,0.656804715599566,0.787107813136792,0,0,0.154816123316076,0.919421224478927,2.409647350226,2.21852406100073,0.154934401160603,0.284338464974843,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0.263384084775077,0.393419540227666,0.393010762749165,0,0,0.32592226663359,0,0,0,0,0.221533894583621,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0.950452044448374,0,0,0,0.236777252044017,0.821127996921047,0.201606743224732,0.267440195783507,0.434473211648397,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0,1.45718115317017,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337834441449967,0,0,0.183201743930407,0,0,2.18047026071267,0,0,0,0.573673241497627,0,0,0,0,0,0.134710672069688,0,0,0,0,1.5608003841516,0.570471821544449,0.149448680551801,0.117434498643765,0,0.561803226808994,0.204154171254893,0,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0,0,0.277064115484183,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.484938170456436,0.355009592516614,0,0,0.386521706326594,0,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.505754070234305,0.241011029883482,0.441175890929576,0.435758888184812,0.474541238222193,0.269662616320329,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,6.91426798074341,2.24803506515239,0.904760751704678,5.37012981919472,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0,1.70130116690864,0.179117045405697,0.290633938513962,0.766765358330422,0,0,0,0.144119953416961,0,0.126995788584338,0,0,0,0.205654985406647,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0.112085143993527,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0.362578348774867,0.601519410909855,0.0920809889358963,0.114814448164607,0,0,0,0.15403067420883,0,1.46139224653261,0.527758144464379,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0.512900250232778,0.328014645699706,0,0,0,0,6.89118645595407,5.85054221432869,0,0.096670718292122,0.462145851343933,0.614014698904518,0.689182862422653,0.322260734604821,0.145016693914229,0.511359764496605,0,0.165284915360978,0,0.638063562472921,0.10115778085555,0,0,0,0.308033580176089,0,0,0.37064843820784,0.143124886741991,0,0,0,0.511795582622668,0,0,0,0,0,0,0.202182481573316,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0.0982490410131212,0.35667105148125,0,0,0,0.75894634753143,0,1.05844323998063,3.35151137767894,2.17781969722645,0,0.43050537267123,1.68471475667626,0.886860307073351,0.918893600827838,0.507447609232169,0,0,0,0,0,0,0,0,0,0.245040215981032,0.185803175125719,2.74111504655245,0.426851060090485,0.478278818186467,2.19537308576098,0.191505370132367,1.05836791361941,0.324621940274555,0.280797178113459,0.456469358066384,7.83399478865116,0,0,1.1241165257259,2.21979677910152,0,0,0,0,0,0,0.278406173895242,0,1.35227839237992,0.33307196799782,0,0.37428108081644,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0077309914171,0.102268682502155,0.738508832766417,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0,0,0,0,0.108647371922008,0,0,0,0,1.09886179476517,1.49590513710141,0.451191321234361,0,0.335643173951685,0.37950746544837,2.2251121057253,0.210998064528027,0.163232808159148,0.282706142867882,1.51472047819464,0,0,0,0,0,0.104421949505455,0,0,0,1.27718352450966,0.19566461893209,0.242780379534093,0,1.20990716048664,0,0,0,0,0,0.992975867626496,0,0,0.284609546029793,0,0,0.489961987071888,0.783532859223623,0,0,2.22539561964896,2.63121541510268,2.38134825454307,0,0,0.225980740780532,0.274083849293502,0,0,0.195551382734803,0.240476460754601,0,0,0,0,0,0.864328787928898,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.393915911536118,0.412079291905832,0.606631894687664,0.196854963029498,0.0846733320657845,0,0,0.160753148465019,0,0,0.2249738915515,0.77380195455795,0,0.335434687599266,0,0.104909176269996,0,0.537862017998534,0.191915197319445,0,0,0.76280561296425,0,0,0,0,0.656740165994712,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,3.557009374163,0.243585196761792,0.638341257770182,0,0,0,0.327872630709804,0.157054096250234,0,0,0,0,0,0,0.415045904808692,0,0,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0.244736704506468,0.179088841081487,0,0.438568099157414,0,0.192914038270915,0.33788488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| ||
|short_description=p20@MYC | |||
}} | }} |
Latest revision as of 06:32, 16 September 2015
Short description: | p20@MYC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_MYC_5end |
Coexpression cluster: | NA |
Association with transcript: | 29bp_to_ENST00000259523_5end |
EntrezGene: | MYC |
HGNC: | 7553 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 8.01e-15 | 3 |
branched duct epithelial cell | 8.01e-15 | 3 |
tracheal epithelial cell | 8.01e-15 | 3 |
tracheoblast | 8.01e-15 | 3 |
epithelial cell of tracheobronchial tree | 3.51e-13 | 9 |
epithelial cell of lower respiratory tract | 3.51e-13 | 9 |
general ecto-epithelial cell | 3.60e-12 | 14 |
endo-epithelial cell | 1.87e-11 | 42 |
sebum secreting cell | 2.98e-11 | 2 |
epithelial cell of sweat gland | 2.98e-11 | 2 |
epithelial cell of skin gland | 2.98e-11 | 2 |
acinar cell of sebaceous gland | 2.98e-11 | 2 |
acinar cell | 1.78e-09 | 5 |
endodermal cell | 3.21e-09 | 58 |
epidermal cell | 3.42e-09 | 9 |
respiratory epithelial cell | 4.87e-09 | 13 |
stratified squamous epithelial cell | 3.97e-08 | 6 |
keratin accumulating cell | 3.97e-08 | 6 |
stratified epithelial cell | 3.97e-08 | 6 |
keratinizing barrier epithelial cell | 3.97e-08 | 6 |
epithelial fate stem cell | 3.97e-08 | 6 |
stratified epithelial stem cell | 3.97e-08 | 6 |
surface ectodermal cell | 3.97e-08 | 6 |
protein secreting cell | 5.80e-08 | 6 |
epithelial cell of alimentary canal | 6.55e-08 | 20 |
bronchial epithelial cell | 1.69e-07 | 3 |
precursor B cell | 2.63e-07 | 3 |
epithelial cell | 8.26e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
skin gland | 2.98e-11 | 2 |
epidermis gland | 2.98e-11 | 2 |
gland of integumental system | 2.98e-11 | 2 |
sebaceous gland | 2.98e-11 | 2 |
skin sebaceous gland | 2.98e-11 | 2 |
sweat gland | 2.98e-11 | 2 |
sweat gland placode | 2.98e-11 | 2 |
sebaceous gland placode | 2.98e-11 | 2 |
tracheobronchial tree | 8.56e-08 | 15 |
lower respiratory tract | 8.56e-08 | 15 |
lower respiratory tract epithelium | 1.69e-07 | 3 |
epithelium of bronchus | 1.69e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.16e-10 | 31 |
leukemia | 3.44e-10 | 39 |
hematologic cancer | 6.00e-09 | 51 |
immune system cancer | 6.00e-09 | 51 |