FFCP PHASE1:Hg19::chr12:104443781..104443859,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83468 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24890 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000550816_5end | |||
|cluster_id=chr12:104443781..104443859,- | |||
|description=CAGE_peak_2_at_GLT8D2_5end | |||
|id=chr12:104443781..104443859,- | |||
|ontology_enrichment_celltype=CL:0000055!3.93e-37!180;CL:0000057!4.34e-22!75;CL:0000680!2.18e-17!57;CL:0000056!2.18e-17!57;CL:0000355!2.18e-17!57;CL:0000187!7.16e-17!54;CL:0000183!1.56e-15!59;CL:0000393!3.17e-15!60;CL:0000211!3.17e-15!60;CL:0000192!2.03e-12!42;CL:0000514!2.03e-12!42;CL:0002620!1.16e-10!23;CL:0000359!3.66e-09!32 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.79e-12;23!CL:0000187;1.55e-10;55!CL:0000192;6.72e-10;43!CL:0000393;8.30e-10;61!CL:0000211;8.30e-10;61!CL:0000057;1.20e-09;73!CL:0000359;2.10e-09;32!CL:0000134;1.16e-07;55!CL:0002320;1.56e-07;188!CL:0000723;3.71e-07;61!CL:0000499;6.39e-07;28!CL:0000048;6.89e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.30e-25,76;CL:0000680,3.69e-19,58;CL:0000056,3.69e-19,58;CL:0000355,3.69e-19,58;CL:0000187,1.48e-18,55;CL:0000393,3.55e-17,61;CL:0000211,3.55e-17,61;CL:0000192,1.83e-13,43;CL:0000514,1.83e-13,43;CL:0002620,4.74e-12,23;CL:0000359,6.59e-10,32;CL:0000048,9.97e-09,427;CL:0000723,3.81e-08,433;CL:0000034,3.67e-07,441;CL:0000499,6.59e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000355;3.25e-10;58!CL:0000514;6.72e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.52e-25!83;UBERON:0002329!3.52e-25!83;UBERON:0003077!3.52e-25!83;UBERON:0003059!3.52e-25!83;UBERON:0007282!3.52e-25!83;UBERON:0009618!3.52e-25!83;UBERON:0007285!3.52e-25!83;UBERON:0004290!6.62e-20!70;UBERON:0000486!4.69e-19!82;UBERON:0002385!1.54e-17!63;UBERON:0001015!1.54e-17!63;UBERON:0000383!1.54e-17!63;UBERON:0001134!2.10e-17!61;UBERON:0002036!2.10e-17!61;UBERON:0003082!2.10e-17!61;UBERON:0003102!8.56e-14!95;UBERON:0005256!1.28e-12!143;UBERON:0000481!4.58e-10!347;UBERON:0000475!1.84e-09!365;UBERON:0002199!3.08e-09!45;UBERON:0002416!3.08e-09!45;UBERON:0003104!4.66e-09!238;UBERON:0009142!4.66e-09!238;UBERON:0000468!5.58e-09!659;UBERON:0002097!3.18e-08!40;UBERON:0002100!8.18e-08!216;UBERON:0000948!8.14e-07!24;UBERON:0005498!8.14e-07!24;UBERON:0004140!8.14e-07!24;UBERON:0009881!8.14e-07!24;UBERON:0004141!8.14e-07!24;UBERON:0003084!8.14e-07!24;UBERON:0007005!8.14e-07!24;UBERON:0004139!8.14e-07!24;UBERON:0004291!8.14e-07!24;UBERON:0007100!9.66e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;4.96e-10;31!UBERON:0001015;4.96e-10;31!UBERON:0000383;4.96e-10;31!UBERON:0000075;1.78e-08;16!UBERON:0002384;4.32e-08;198!UBERON:0002204;6.67e-08;70!UBERON:0002097;4.39e-07;41!UBERON:0004905;9.43e-07;8!UBERON:0000982;9.43e-07;8!UBERON:0004770;9.43e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,8.98e-22,73;UBERON:0002329,1.11e-21,71;UBERON:0003059,1.11e-21,71;UBERON:0007282,1.11e-21,71;UBERON:0004290,1.11e-21,71;UBERON:0009618,1.11e-21,71;UBERON:0003077,4.94e-21,72;UBERON:0007285,4.94e-21,72;UBERON:0000486,1.10e-19,83;UBERON:0001134,8.32e-19,62;UBERON:0002036,8.32e-19,62;UBERON:0003082,8.32e-19,62;UBERON:0002385,1.63e-18,64;UBERON:0001015,1.63e-18,64;UBERON:0000383,1.63e-18,64;UBERON:0007503,1.53e-17,78;UBERON:0003102,4.97e-14,99;UBERON:0005256,2.03e-11,122;UBERON:0003104,2.79e-11,160;UBERON:0009142,2.79e-11,160;UBERON:0002199,7.27e-10,46;UBERON:0002416,7.27e-10,46;UBERON:0002097,3.75e-09,41;UBERON:0000075,1.32e-08,16;UBERON:0000948,3.97e-07,24;UBERON:0005498,3.97e-07,24;UBERON:0004140,3.97e-07,24;UBERON:0009881,3.97e-07,24;UBERON:0004141,3.97e-07,24;UBERON:0003084,3.97e-07,24;UBERON:0007005,3.97e-07,24;UBERON:0004139,3.97e-07,24;UBERON:0004291,3.97e-07,24;UBERON:0011137,4.52e-07,14;UBERON:0004872,5.24e-07,83;UBERON:0000490,5.84e-07,148;UBERON:0004573,6.48e-07,33;UBERON:0004571,6.48e-07,33;UBERON:0004905,9.15e-07,8;UBERON:0000982,9.15e-07,8;UBERON:0004770,9.15e-07,8 | |||
|phase1_expression=7.99384868790449,4.92431204949261,13.1087595809253,8.00586386825043,4.02264984984559,5.23403114460221,2.53299878168311,1.89515962028049,0.783556884599516,0,0,0.218441372130172,0.527533956456907,35.2734105936133,27.8373795611449,6.05092631806598,3.61616716814386,2.92124036154949,6.34312638427659,0.492484232307152,1.02000345622126,0.313454721478088,0.572471974262113,0,0.376627918784408,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,5.36560687762909,3.32442660793179,7.95166135246046,13.0347856765331,17.5264287942597,22.2680065174308,18.0054902011975,3.02511414925017,1.10864698731282,1.14185221401064,2.16115474571226,0.364295288292542,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,5.96366342034382,11.6500070731413,7.0176865831006,27.5363155918861,3.54668382198357,3.36406560085384,1.06748995729705,1.72667283892012,11.8260193451911,4.84958419450877,3.26923806226917,22.7036141467397,16.70910180992,7.96692868234909,5.30672130611545,2.2818872861778,4.18456305545043,2.93586246609412,1.61872944368132,1.96631129383148,21.027879639254,10.072414019565,16.8421023316498,30.8880742893334,23.98489214002,0,0.718618141816238,12.793544660509,7.38199267244589,8.58898758000967,15.8031943517102,17.4698043605441,18.629519304418,1.24775401476023,7.35497506324334,47.1961829289034,14.6233011800098,26.107925359343,35.5531225872614,14.4278702425552,22.5201396161224,10.2953562667172,13.1539956967618,8.07788077581166,42.1588535781731,51.7267381820198,13.4903645156313,6.2466300901137,5.59549954624609,1.15956511897978,2.72746120590835,0.286804595389004,0.243947412259191,0.265059536642971,0.580969714347592,0.10366105501537,0.504641701751257,2.18986415445498,26.5964204960687,26.3728784659083,5.52539685409922,5.10804720835177,7.21879481669586,7.45332840251016,5.05754070234305,9.15841913557232,6.06616850028167,5.88274499049497,2.84724742933316,5.12358971008625,5.88664395376038,5.77120735419586,0,0,2.057870056657,1.47008711385542,0,0,0.590789906681404,0,0,1.54411029268673,0.658501712451753,0,0,1.20364978706088,3.58389135841357,0,0,1.15930404975077,6.45747818297019,0.144366447761074,0,0.380508304469197,0,0,0,0,0,1.87467667973554,2.51973192298289,1.70130116690864,2.4180801129769,2.3250715081117,3.06706143332169,0,0,0.207328115540772,0.144119953416961,0,0.063497894292169,0,0,1.71072446022705,0.308482478109971,0,0,5.49442313292267,5.66748089483264,3.8135908626894,5.8172272091,7.15312891703765,1.690605505112,6.64845291462176,3.12022310734098,1.54324424557285,0,1.3321108950805,5.00422977803516,0.542621605391443,1.64648067356154,2.60588947434988,4.26470338491055,1.58390374586686,5.12446941001296,6.10073421020206,2.19940580600526,0,0,0,3.11512312139057,13.7834323000937,8.5582143024431,3.76431397335706,3.6985738059069,1.96967059563885,0,0,0,0,0,0,0,0,0,0,0,0,26.5013622113342,13.5046040686113,18.1747565878823,12.89419341491,21.4114786556594,22.5514453498527,20.9683132836957,17.4548737842077,13.6444502433591,3.10419213877515,7.97070718242524,6.0841825618762,24.7618301234036,1.76221041716467,3.77457766191941,0,0,0,0,1.66435439510497,1.20956117331872,11.164851351845,14.1185015425017,7.85848264412606,8.32904470162056,14.8395102229344,5.95159508231348,0,7.86469438393543,16.1581170034946,16.0969225787066,15.5776328755086,8.71577838449694,0,0.601519410909855,0.184161977871793,9.52959919766236,16.0240227845911,16.6528006998469,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0.656029291399411,0,1.54561517471583,0.183138929636687,0.165018999841176,0.574265537996172,1.30012049207304,20.8889108797407,14.9839613352789,3.85121542786611,7.21467271212809,2.48105830472155,22.5582514223375,12.7614690644521,4.09087811597284,13.5328694183041,0.495854746082934,0.576570202095319,0.510450849978337,0.708104465988849,7.43752878875657,28.6479235615882,17.425931754015,3.69640296211307,3.19383618190213,11.3091288969759,3.52116016297448,1.71749864090389,13.7698596663077,12.9715564134678,4.00323407240032,1.535386747868,6.84702380854273,15.9101623962968,3.92474320099615,15.8287762673317,9.33425901102586,4.47687128913608,2.83055474202642,1.58510321173008,2.10629228119491,0.975267478179181,6.82397770967596,3.16950440270266,9.69149370996699,23.7561125682237,9.04064932961942,11.5786722144686,1.99031692572366,3.06915619677634,5.20897980840019,17.7091583052591,1.01455188481352,1.54911749049875,5.91560765317707,2.29458163526482,3.7334635584986,0.35667105148125,4.61189383291777,14.5664268355388,10.5374365747169,2.65631221636001,7.69856384538962,1.25088746543166,0.670302275535787,0,1.50630081242847,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,3.41837027607914,0,1.22520107990516,0,0,0,0,0,0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| |||
|short_description=p2@GLT8D2 | |||
}} |
Latest revision as of 23:26, 15 September 2015
Short description: | p2@GLT8D2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GLT8D2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000550816_5end |
EntrezGene: | GLT8D2 |
HGNC: | 24890 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.30e-25 | 76 |
muscle precursor cell | 3.69e-19 | 58 |
myoblast | 3.69e-19 | 58 |
multi-potent skeletal muscle stem cell | 3.69e-19 | 58 |
muscle cell | 1.48e-18 | 55 |
electrically responsive cell | 3.55e-17 | 61 |
electrically active cell | 3.55e-17 | 61 |
smooth muscle cell | 1.83e-13 | 43 |
smooth muscle myoblast | 1.83e-13 | 43 |
skin fibroblast | 4.74e-12 | 23 |
vascular associated smooth muscle cell | 6.59e-10 | 32 |
multi fate stem cell | 9.97e-09 | 427 |
somatic stem cell | 3.81e-08 | 433 |
stem cell | 3.67e-07 | 441 |
stromal cell | 6.59e-07 | 28 |