FFCP PHASE1:Hg19::chr12:123636158..123636177,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:123636158..123636177,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr12:123636158..123636177,- | |||
|id=chr12:123636158..123636177,- | |||
|ontology_enrichment_celltype=CL:0000349!4.84e-12!3;CL:0002577!4.84e-12!3;CL:0000039!2.29e-08!7;CL:0000586!2.29e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0002577;3.24e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,3.24e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.31e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.79e-13!57;UBERON:0005068!2.79e-13!57;UBERON:0006241!2.79e-13!57;UBERON:0007135!2.79e-13!57;UBERON:0003075!1.64e-12!86;UBERON:0007284!1.64e-12!86;UBERON:0003056!3.53e-12!61;UBERON:0002346!9.68e-12!90;UBERON:0000955!1.21e-11!69;UBERON:0006238!1.21e-11!69;UBERON:0005743!3.97e-11!86;UBERON:0000473!4.03e-11!8;UBERON:0002780!4.17e-11!41;UBERON:0001890!4.17e-11!41;UBERON:0006240!4.17e-11!41;UBERON:0002616!4.70e-11!59;UBERON:0000073!8.22e-11!94;UBERON:0001016!8.22e-11!94;UBERON:0003080!8.80e-11!42;UBERON:0001017!1.83e-10!82;UBERON:0000153!1.96e-10!129;UBERON:0007811!1.96e-10!129;UBERON:0007023!2.02e-10!115;UBERON:0000033!3.61e-09!123;UBERON:0001987!3.97e-09!4;UBERON:0004340!3.97e-09!4;UBERON:0001905!5.67e-09!2;UBERON:0002757!5.67e-09!2;UBERON:0010134!5.67e-09!2;UBERON:0002784!5.67e-09!2;UBERON:0005408!5.67e-09!2;UBERON:0001899!5.67e-09!2;UBERON:0004121!3.06e-08!169;UBERON:0003135!5.42e-08!11;UBERON:0000924!6.48e-08!173;UBERON:0006601!6.48e-08!173;UBERON:0001893!8.83e-08!34;UBERON:0001869!8.36e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;7.41e-67;2!UBERON:0002757;7.41e-67;2!UBERON:0010134;7.41e-67;2!UBERON:0005408;7.41e-67;2!UBERON:0001899;7.41e-67;2!UBERON:0003296;4.28e-34;4!UBERON:0010133;4.28e-34;4!UBERON:0002784;4.28e-34;4!UBERON:0001894;5.35e-20;7!UBERON:0001987;1.70e-09;4!UBERON:0000966;6.13e-08;5!UBERON:0005388;6.13e-08;5!UBERON:0001802;6.13e-08;5!UBERON:0000970;1.35e-07;20!UBERON:0002104;2.82e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,7.41e-67,2;UBERON:0002757,7.41e-67,2;UBERON:0010134,7.41e-67,2;UBERON:0005408,7.41e-67,2;UBERON:0001899,7.41e-67,2;UBERON:0003296,4.28e-34,4;UBERON:0010133,4.28e-34,4;UBERON:0002784,4.28e-34,4;UBERON:0001894,5.35e-20,7;UBERON:0006222,5.35e-20,7;UBERON:0001987,1.70e-09,4;UBERON:0004340,1.70e-09,4;UBERON:0000970,2.77e-07,21;UBERON:0002104,2.77e-07,21;UBERON:0000966,8.02e-07,6;UBERON:0005388,8.02e-07,6;UBERON:0001802,8.02e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,2.71176888936639,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0.124252535565433,0.235694034616795,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,0,0,0,0,6.42842203053944,7.0619581665953,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,5.71812353413251,0.632054446930906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659643100472575,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0.26721740526556,0.18378979906969,2.005660314339,0,0.535928260312357,0,0,0,0,0.129177819672012,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:123636158..123636177,- | |||
}} |
Latest revision as of 06:13, 24 July 2015
Short description: | p@chr12:123636158..123636177, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:123636158..123636177, - |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
pineal body | 7.41e-67 | 2 |
regional part of epithalamus | 7.41e-67 | 2 |
secretory circumventricular organ | 7.41e-67 | 2 |
circumventricular organ | 7.41e-67 | 2 |
epithalamus | 7.41e-67 | 2 |
gland of diencephalon | 4.28e-34 | 4 |
neuroendocrine gland | 4.28e-34 | 4 |
regional part of diencephalon | 4.28e-34 | 4 |
diencephalon | 5.35e-20 | 7 |
future diencephalon | 5.35e-20 | 7 |
placenta | 1.70e-09 | 4 |
allantois | 1.70e-09 | 4 |
eye | 2.77e-07 | 21 |
visual system | 2.77e-07 | 21 |
retina | 8.02e-07 | 6 |
photoreceptor array | 8.02e-07 | 6 |
posterior segment of eyeball | 8.02e-07 | 6 |