FFCP PHASE1:Hg19::chr12:28283958..28283983,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:28283958..28283983,+ | |||
|description=CAGE_peak_at_chr12:28283958..28283983,+ | |||
|id=chr12:28283958..28283983,+ | |||
|ontology_enrichment_celltype=CL:0002076!4.52e-17!43;CL:0000066!1.01e-15!254;CL:0000223!2.58e-12!59;CL:0002251!4.08e-09!21;CL:0002166!8.77e-09!3;CL:0002159!1.06e-08!13;CL:0002621!1.66e-08!3;CL:0002368!1.76e-08!13;CL:0000076!1.91e-08!62 | |||
|ontology_enrichment_celltype_v019=CL:0002166;9.78e-29;3!CL:0002621;5.43e-28;3!CL:0002159;2.21e-16;14!CL:0002076;1.83e-15;42!CL:0002231;8.86e-13;3!CL:0002368;2.13e-11;13!CL:0002077;4.88e-08;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,8.92e-29,3;CL:0002621,9.87e-28,3;CL:0002159,2.14e-16,14;CL:0002076,4.08e-16,42;CL:0002231,8.35e-13,3;CL:0002368,2.10e-11,13;CL:0000223,2.49e-11,58;CL:0000066,2.59e-11,253;CL:0002077,2.46e-09,34 | |||
|ontology_enrichment_development_v019=CL:0000223;6.69e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!3.05e-21!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003729!3.21e-11!5;UBERON:0003343!3.66e-09!4;UBERON:0004785!3.66e-09!4;UBERON:0001949!1.66e-08!3;UBERON:0000161!5.28e-07!35;UBERON:0001004!9.91e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;5.43e-28;3!UBERON:0001708;1.01e-21;4!UBERON:0008895;1.01e-21;4!UBERON:0011159;1.67e-17;5!UBERON:0000486;1.96e-12;12!UBERON:0003929;2.36e-12;7!UBERON:0003350;7.07e-11;8!UBERON:0001828;7.07e-11;8!UBERON:0011137;3.05e-08;11!UBERON:0010323;3.05e-08;11!UBERON:0010371;1.89e-07;31!UBERON:0003729;7.04e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,9.87e-28,3;UBERON:0001708,9.42e-22,4;UBERON:0008895,9.42e-22,4;UBERON:0011159,1.58e-17,5;UBERON:0010188,1.05e-14,6;UBERON:0002539,1.05e-14,6;UBERON:0008816,1.05e-14,6;UBERON:0003350,8.80e-11,8;UBERON:0001828,8.80e-11,8;UBERON:0010323,2.98e-08,11;UBERON:0003102,1.11e-07,99;UBERON:0003729,8.03e-07,13 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717558542755448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12586938479627,5.72766853240753,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96325770603289,0,0.904760751704678,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,9.07103492273841,7.65585525108887,0.895585227028483,1.16253575405585,0.383382679165211,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40354529212299,1.38121483403844,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,5.78497203763423,1.15314040419064,2.4246415373971,0.910420027699949,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73199802905922,0,0,0,0.43050537267123,0,0.443430153536676,2.06751060186264,0,0,0,0,0,0,0,0,0,0,2.94048259177238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0,0,0,0.20453736500431,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55825354416746,0.988511511572023,1.77517314159274,0,0,0,0,0.978323094660449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489961987071888,0.261177619741208,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.160317640503067,0,0.39961921916426,0,0,0,0.432164393964449,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0.457680136793847,0,0,0.295710299979268,0.159296767163702,0.449803112163605,0.155262956876259,0,0,0,0.450772826991655,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0.559518030877778,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0.589848616738702,0.366857197043358,0.115525666150338,0.381382095467167,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333694205676207,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60698544745092,3.88184358887261,0.160482733378337,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.143444410785353,0,0,0.106727345877715,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p@chr12:28283958..28283983,+ | |||
}} |
Latest revision as of 07:56, 24 July 2015
Short description: | p@chr12:28283958..28283983, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:28283958..28283983, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 8.92e-29 | 3 |
gingival epithelial cell | 9.87e-28 | 3 |
general ecto-epithelial cell | 2.14e-16 | 14 |
endo-epithelial cell | 4.08e-16 | 42 |
epithelial cell of prostate | 8.35e-13 | 3 |
respiratory epithelial cell | 2.10e-11 | 13 |
endodermal cell | 2.49e-11 | 58 |
epithelial cell | 2.59e-11 | 253 |
ecto-epithelial cell | 2.46e-09 | 34 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 9.87e-28 | 3 |
jaw skeleton | 9.42e-22 | 4 |
splanchnocranium | 9.42e-22 | 4 |
primary subdivision of cranial skeletal system | 1.58e-17 | 5 |
protuberance | 1.05e-14 | 6 |
pharyngeal arch | 1.05e-14 | 6 |
embryonic head | 1.05e-14 | 6 |
epithelium of mucosa | 8.80e-11 | 8 |
gingiva | 8.80e-11 | 8 |
cranial skeletal system | 2.98e-08 | 11 |
surface structure | 1.11e-07 | 99 |
mouth mucosa | 8.03e-07 | 13 |