FFCP PHASE1:Hg19::chr12:32480889..32480935,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=636 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1049 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-400bp_to_ENST00000547680_5end | |||
|cluster_id=chr12:32480889..32480935,+ | |||
|description=CAGE_peak_9_at_BICD1_5end | |||
|id=chr12:32480889..32480935,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;5.39e-11;7!CL:0000586;5.39e-11;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.68e-11,7;CL:0000586,5.68e-11,7;CL:0000047,3.27e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.12e-09;1!UBERON:0010226;5.51e-09;1!UBERON:0009117;7.82e-08;10!UBERON:0005564;7.82e-08;10 | |||
|ontology_enrichment_disease=DOID:193!9.40e-08!29;DOID:120!8.37e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:154;2.98e-16;2!DOID:4236;2.98e-16;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,1.88e-16,2;DOID:4236,1.88e-16,2 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.77e-10!82;UBERON:0005743!4.89e-10!86;UBERON:0000073!1.46e-09!94;UBERON:0001016!1.46e-09!94;UBERON:0001049!3.06e-09!57;UBERON:0005068!3.06e-09!57;UBERON:0006241!3.06e-09!57;UBERON:0007135!3.06e-09!57;UBERON:0002616!1.30e-08!59;UBERON:0000955!3.70e-08!69;UBERON:0006238!3.70e-08!69;UBERON:0002780!5.31e-07!41;UBERON:0001890!5.31e-07!41;UBERON:0006240!5.31e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.11e-09;8!UBERON:0000991;2.89e-09;21!UBERON:0002084;5.51e-09;1!UBERON:0002082;5.51e-09;1!UBERON:0003135;3.69e-07;11!UBERON:0001872;4.99e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.16e-09,8;UBERON:0000991,2.59e-09,21;UBERON:0009196,2.59e-09,21;UBERON:0009117,2.59e-09,21;UBERON:0005564,2.59e-09,21;UBERON:0002084,4.19e-09,1;UBERON:0002082,4.19e-09,1;UBERON:0010226,4.19e-09,1;UBERON:0004176,7.01e-09,22;UBERON:0001017,1.13e-07,81;UBERON:0003135,3.82e-07,11;UBERON:0001872,5.48e-07,5;UBERON:0001016,9.10e-07,89 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0.204000691244253,0.626909442956176,0,0.410623275218653,0.251085279189606,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0.154934401160603,0.142169232487422,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0.182664153764634,0,0,0.889509253863555,0,0,0,0,0,1.1384259382189,0,0.764546456250458,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0.294605907474837,0,0.270803863765016,0,0,0,0.552700035571697,0,0.296573126324121,0.267540828089713,0,0.113309342697566,0,0,0.506039384039006,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0.665188192387692,0.351339142772504,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0,0,0,0.267899184852239,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0,0,1.06748995729705,0,0,0,0,0.151357427644931,0.576175924479999,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0.168336113954066,0.250237039743928,0,0,0.30648779579902,0.150238058906597,0,0.358779271377724,0,0.211931901159562,0.300091096084402,0.103052529238439,0.515281080091258,0.18611685633159,0.168776332241266,0.194874010322397,1.00973509697646,0,0.323292113637624,0.355009592516614,0,0,0,0,0,1.21973706129595,0.265059536642971,0.69716365721711,0.518305275076852,0.504641701751257,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0.482022059766964,0.330881918197182,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0.410952645100767,0.179060963239896,0,0.394061520403854,0,0.128343036279748,1.01637849688985,0,1.54657762555539,0,0.637938751653163,0,0,0,0,0.500170521059677,0,0,0.356857977594324,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0,0,0.308419387605311,0.532685175939381,0.0821271560138091,0.519254429183621,0.464841513839837,0.241718899183244,0.200506470303285,0,0.34444334449382,0.364182336013434,0,0,0.385076685522074,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0.650756789328606,0,0.183138929636687,0.082509499920588,0,0.650060246036521,0,0,0.154048617114644,0,0.137836572484531,0.107420244868274,0,0,0.0890320356467374,0.165284915360978,0,0,0,0.929691098594572,0,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0.354761064070598,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0.557409525377156,0,0.0711418433484141,0.318852545457645,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0.307160702099232,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0.1137934482855,0.254253650292766,0,0,0.291604613383254,1.21537496453305,1.77148277162768,0.241192877250816,0,1.10579259931225,0.886642856860642,0,0,0.278847488557207,0.230850775511391,0.113942055847001,0,0,0,0.31900115973192,0.0915975934018623,0,1.02193298195737,0,0,0,0,0,0,0,0.843992258112108,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0.19566461893209,0,0,1.20990716048664,0.91821828489147,0.063186579628488,0,0.103688191397247,0.664653872707185,0.661983911750998,0.313932918407225,0,0,0.277349346026277,0.173559738335131,0,0,0,0.343972064943233,0.290268993867255,0.0730893170861856,0,0,0,0.225980740780532,0,0,0.126621591911757,0.195551382734803,0.0801588202515337,0.213452994739353,0.19980960958213,0.144090417154106,0,0.171594997861965,0,0,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0.558564802544508,0,0,0.399358000997982,0.429226048136571,0,0,0.360299883542404,0,0,0,0,0.0984274815147488,0,0,0.681017030557878,0.321506296930038,0.412618309791701,1.66176135211674,0,0,0.242998226632099,0,0,0,0.316801009558219,0.717149357331379,0,0,1.32418394073086,0,0,0.864221491201268,0.326587360109409,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0.157204305099666,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0,0,2.07444650333337,0.1251909307065,0,0.443716206147409,0.18628920882415,2.90532133366085,0,0.151649117541648,0,0.705797459094515,0,0.144921028610825,0.149254802886874,0.233713309847224,0.554805861502613,0.189403005275089,0,0,0,0,0,0.295710299979268,0.159296767163702,0,0.310525913752519,1.24411862352257,0.265841714557995,0.521745061811734,0.150257608997218,0.380805212168795,0.406870733204662,0.363697318405119,0.214821114084977,0,1.59238355479446,0.400027764663154,0,0,0,0,0,0.260994291965212,0.226705925512272,0,0.244736704506468,0.179088841081487,0.308801447160972,0,0,0,0.337884881306145,1.79369063011563,0,0,0.414775308455192,0,0,0,1.63804924423206,0,0,0,0,0.172214979660816,0,0,0,0,0.127894371303652,0.107824811396682,0.157265941855896,0.436838552768056,0.169732529954025,0.425149840203366,0,0,0,0,0,0,0.6124909547064,0.256916900385838,0,0.159633859057151,0,0.252071696221718,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0.20170506870352,0,0,0.163771917510097,0,0.135075169236789,0,1.2401207790071,0.0634158101939068,1.09394961803644,0,0,0,0,0,0,0,0.455324382702595,0.0887023701626388,0.115233987555779,0,0.203909198930495,0.197318320688547,0.354581522651905,0.111231401892069,0,0,0,0,0,0.47775168788705,0,0.316027223465453,0.348724276104376,0,0,0,0.17071847709395,0,0,0,0,0,0.22910686854405,0.31020638566432,0.955538938977433,0.335566295393377,0,0,0.647428837187895,0,0,0.485710993059139,0.233939463462106,0.397901550322736,0,0,0.329821550236287,0,0.154348316215889,0.437119121007915,0,0,0,0.196308467114945,0.297046400327086,0,0,0.0939839179798536,0,0.0999411559249289,0.178553938605658,0,0.0802413666891683,0,0,0.286679166302903,0,0.135982980381829,0.436350690340377,0.5290268405154,0.371995018166751,0,0,0.126166424835079,0.218531143927391,0.253397002022874,0.305966489225945,4.80991329478009,3.85958578046349,2.005660314339,0,0,0.829169439458779,0.310298987585686,0.213233981900981,0,0.129177819672012,0,0,0.25458863311266,0.202117188958219,0.217716747896961,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,2.34640942403454,0,0.406896178315738,0,0,0.320568492303233 | |||
|short_description=p9@BICD1 | |||
}} |
Latest revision as of 04:53, 18 September 2015
Short description: | p9@BICD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_BICD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -400bp_to_ENST00000547680_5end |
EntrezGene: | BICD1 |
HGNC: | 1049 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.68e-11 | 7 |
germ cell | 5.68e-11 | 7 |
neuronal stem cell | 3.27e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
testis | 1.16e-09 | 8 |
gonad | 2.59e-09 | 21 |
indifferent external genitalia | 2.59e-09 | 21 |
indifferent gonad | 2.59e-09 | 21 |
gonad primordium | 2.59e-09 | 21 |
heart left ventricle | 4.19e-09 | 1 |
cardiac ventricle | 4.19e-09 | 1 |
future cardiac ventricle | 4.19e-09 | 1 |
external genitalia | 7.01e-09 | 22 |
central nervous system | 1.13e-07 | 81 |
male reproductive organ | 3.82e-07 | 11 |
parietal lobe | 5.48e-07 | 5 |
nervous system | 9.10e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 1.88e-16 | 2 |
carcinosarcoma | 1.88e-16 | 2 |