FFCP PHASE1:Hg19::chr14:75078725..75078734,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4053 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6715 | |||
|TSSclassifier=strong | |||
|UniProt=G3V3X5 | |||
|association_with_transcript=40bp_to_ENST00000556690_5end | |||
|cluster_id=chr14:75078725..75078734,- | |||
|coexpression_cluster_id=C758 | |||
|description=CAGE_peak_15_at_LTBP2_5end | |||
|id=chr14:75078725..75078734,- | |||
|ontology_enrichment_celltype=CL:0000055!1.07e-20!180;CL:0000057!1.50e-17!75;CL:0000222!2.30e-14!119;CL:0002371!8.85e-12!591;CL:0000115!1.81e-10!35;CL:0000144!2.00e-10!625;CL:0000183!1.87e-09!59;CL:0002078!9.47e-09!44;CL:0000680!1.51e-08!57;CL:0000056!1.51e-08!57;CL:0000355!1.51e-08!57;CL:0002139!8.52e-08!24;CL:0000220!1.17e-07!246;CL:0000187!1.65e-07!54;CL:0000213!2.28e-07!57;CL:0000215!2.28e-07!57;CL:0002321!2.36e-07!248;CL:0002334!3.28e-07!12;CL:0000359!7.97e-07!32;CL:0002620!8.91e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.00e-09;12!CL:0000115;1.22e-08;36!CL:0000327;1.91e-08;15!CL:0000057;5.91e-07;73!CL:0002139;8.08e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.42e-13,76;CL:0002334,3.24e-10,12;CL:0000115,2.73e-09,36;CL:0000222,8.36e-09,121;CL:0000327,4.52e-08,15;CL:0000213,2.58e-07,58;CL:0000215,2.58e-07,58;CL:0002078,3.54e-07,45;CL:0002139,5.87e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.23e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.23e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.30e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!4.33e-22!79;UBERON:0007798!4.33e-22!79;UBERON:0004872!2.11e-17!84;UBERON:0000055!5.54e-17!69;UBERON:0001981!2.37e-16!60;UBERON:0007500!2.37e-16!60;UBERON:0004537!2.37e-16!60;UBERON:0006965!2.37e-16!60;UBERON:0001009!6.49e-16!113;UBERON:0004535!1.51e-15!110;UBERON:0003914!5.53e-13!118;UBERON:0001637!2.32e-11!42;UBERON:0003509!2.32e-11!42;UBERON:0004572!2.32e-11!42;UBERON:0000486!3.91e-10!82;UBERON:0000468!8.56e-10!659;UBERON:0000914!9.25e-10!83;UBERON:0002329!9.25e-10!83;UBERON:0003077!9.25e-10!83;UBERON:0003059!9.25e-10!83;UBERON:0007282!9.25e-10!83;UBERON:0009618!9.25e-10!83;UBERON:0007285!9.25e-10!83;UBERON:0000119!2.79e-09!312;UBERON:0000490!7.95e-09!138;UBERON:0005256!9.01e-09!143;UBERON:0000483!1.18e-08!309;UBERON:0004290!1.88e-08!70;UBERON:0000467!1.96e-08!625;UBERON:0000480!2.64e-08!626;UBERON:0003102!2.76e-08!95;UBERON:0000475!4.90e-08!365;UBERON:0001134!1.28e-07!61;UBERON:0002036!1.28e-07!61;UBERON:0003082!1.28e-07!61;UBERON:0004573!2.05e-07!33;UBERON:0004571!2.05e-07!33;UBERON:0002385!2.35e-07!63;UBERON:0001015!2.35e-07!63;UBERON:0000383!2.35e-07!63;UBERON:0000477!6.31e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;4.17e-09;13!UBERON:0001637;7.33e-09;42!UBERON:0003509;7.33e-09;42!UBERON:0004572;7.33e-09;42!UBERON:0002118;4.74e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.77e-16,78;UBERON:0007798,1.77e-16,78;UBERON:0000055,4.54e-13,68;UBERON:0007500,6.30e-13,59;UBERON:0001981,6.30e-13,59;UBERON:0004537,6.30e-13,59;UBERON:0006965,6.30e-13,59;UBERON:0004872,5.52e-12,83;UBERON:0004535,6.78e-12,109;UBERON:0001009,3.05e-11,112;UBERON:0001637,8.49e-11,42;UBERON:0003509,8.49e-11,42;UBERON:0004572,8.49e-11,42;UBERON:0003914,6.61e-09,117;UBERON:0000992,6.65e-09,13;UBERON:0002118,7.79e-07,5 | |||
|phase1_expression=1.2717486548939,1.07050261945492,1.83240725324762,0,0.893922188854576,0,0,0.631719873426831,0.261185628199839,0.245733936501509,0.697801167972428,1.96597234917155,3.9565046734268,0.74259811776028,0.662794751455832,0,1.20538905604795,0,1.95173119516203,1.10808952269109,1.42800483870977,0,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0.895661896959697,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.44575660953827,1.00267582127178,2.17269778441236,3.9764297352555,3.89307896242109,0.945348171640679,1.10864698731282,0.87834785693126,0.72038491523742,0.728590576585084,0,0,0,0,0,0,0,0.993812036833525,0,4.51282652089873,3.39184765154406,1.67799774483962,1.6507082516404,1.04497483268405,3.10100111003195,1.77883131343355,2.00832367658802,0.805658634218294,0,0.488124115096339,0.735326160691737,3.24056779152704,1.16089646769304,2.2452937262617,1.91439516821648,0,0.949265659568129,3.11442964681692,0,0,0,2.98183171017191,1.51956613997496,2.64818361626438,5.44989579422746,0.709336764396714,1.12135520028461,1.06748995729705,1.48000529050296,0,0.67355336034844,0.653847612453835,1.21085942115945,2.30470369792,0.70296429550139,0.312160076830321,0.570471821544449,0.747243402759005,0.23486899728753,0.161872944368132,0,1.22492502752936,1.47401180774122,0.826606249406124,5.94001428641027,2.22540236350701,0.910161361938026,0,0.336672227908132,0.250237039743928,0.277064115484183,0,0.612975591598039,2.85452311922534,0.680593098960126,1.61450672119976,2.56268866582281,0.635795703478686,3.60109315301283,1.13357782162283,2.31876486041066,0.930584281657949,2.53164498361899,0.292311015483596,1.51460264546469,1.28869858099219,0.969876340912871,3.19508633264953,0.503760491138201,0.508681776931463,2.31913023795956,1.63647672354501,0.860413786167011,0,0,0,0,0,0,3.12899064659632,1.92972281457866,0,2.3218396401599,0.721879481669586,0,0,0,0,0,0,0,0,0,1.4763109092493,1.40241773803446,1.2347220339942,1.47008711385542,0,0,0,0,0,1.54411029268673,0.329250856225877,1.1240175325762,0.100528972411631,0.648119116109707,0,1.03993478527958,1.44331342025273,0.115930404975077,4.57893907519705,0.577465791044295,0.462985512576611,0,0,0,0.246217006087397,0,0.594524649154913,0.93733833986777,1.00789276919316,1.55952606966625,0,0.290633938513962,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0.102827492703324,0,0,1.12131084345361,0.87192013766656,1.0267360014933,2.58543431515556,7.15312891703765,0.845302752556,1.06375246633948,1.04007436911366,0.771622122786426,0,2.1313774321288,0.142977993658148,0.542621605391443,0.823240336780769,0,0,0.791951872933429,0.301439377059586,1.74306691720059,1.09970290300263,0,0,0,0.239624855491583,0,1.42636905040718,2.02693829334611,0.61642896765115,1.61154866915906,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0.500170521059677,0,0.831883446123229,0.535286966391485,0.630809660135739,0.819989904948992,2.40756879782175,4.5481500811197,1.03473071292505,1.99267679560631,0.368738337083406,0.434418072340414,5.48243240895674,1.02943027143257,0,0,0,0.303127571446259,1.66435439510497,0.30239029332968,2.72918588600655,2.455391572609,1.68396056659844,2.81906128362542,3.58195074346692,1.28683136914886,0,1.3878872442239,2.30830242907065,1.64254312027618,2.59627214591811,0.929683027679674,0,3.20810352485256,0.0920809889358963,0.459257792658427,0,0.131124414959424,0.902399225814824,0.308061348417659,0,0,0.527758144464379,2.27466768141793,1.19065593693561,1.0795795805107,0,0.812839312631559,3.01013864312912,0.254876273045038,0,0.895499018888713,0,0,0,0.984043937099117,0.650756789328606,0.206082023295445,0,0,1.72279661398852,0.650060246036521,4.82051789532479,1.16004861950546,0,0.15350367472613,0.413509717453592,0.644521469209642,0.725083469571143,0.681813019328807,1.33548053470106,0.991709492165869,1.15314040419064,0.893288987462089,0.10115778085555,0,8.49993336442728,0,0.924100740528266,0,0,2.40921484835096,0.286249773483982,0.744316738719335,2.21465597303108,0.571890581771475,0.767693373934002,0.855877976067841,0.95460974377781,0.78494864019923,0.539617372749944,0.54907405947211,0.235624804691373,0.606547444719948,0,0.421258456238981,0.48763373908959,1.70599442741899,1.05650146756755,1.22849920267187,0.141405431953713,1.13008116620243,1.10273068709225,2.65375590096488,0.876901770507525,0,0,1.42037263873893,1.54911749049875,2.25356482025793,0.717056761020258,0.392996164052485,2.1400263088875,0,0.633322905892992,1.31717957183961,1.13841952129715,1.04980416073495,0.0962221127255121,0,1.08890984861323,0.188287601553558,1.29151611801369,0,0.886860307073351,2.06751060186264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0.307160702099232,0,0,0.111308705022906,0,0,1.9924798825107,1.10513566212459,0,0,0,0.311039587661807,0,0,0,0.295930216910801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| |||
|short_description=p15@LTBP2 | |||
}} |
Latest revision as of 01:15, 16 September 2015
Short description: | p15@LTBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_LTBP2_5end |
Coexpression cluster: | C758_Chondrocyte_Amniotic_Smooth_Fibroblast_Pericytes_Endothelial_Urothelial |
Association with transcript: | 40bp_to_ENST00000556690_5end |
EntrezGene: | LTBP2 |
HGNC: | 6715 |
UniProt: | G3V3X5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.42e-13 | 76 |
preadipocyte | 3.24e-10 | 12 |
endothelial cell | 2.73e-09 | 36 |
mesodermal cell | 8.36e-09 | 121 |
extracellular matrix secreting cell | 4.52e-08 | 15 |
lining cell | 2.58e-07 | 58 |
barrier cell | 2.58e-07 | 58 |
meso-epithelial cell | 3.54e-07 | 45 |
endothelial cell of vascular tree | 5.87e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
vasculature | 1.77e-16 | 78 |
vascular system | 1.77e-16 | 78 |
vessel | 4.54e-13 | 68 |
epithelial tube open at both ends | 6.30e-13 | 59 |
blood vessel | 6.30e-13 | 59 |
blood vasculature | 6.30e-13 | 59 |
vascular cord | 6.30e-13 | 59 |
splanchnic layer of lateral plate mesoderm | 5.52e-12 | 83 |
cardiovascular system | 6.78e-12 | 109 |
circulatory system | 3.05e-11 | 112 |
artery | 8.49e-11 | 42 |
arterial blood vessel | 8.49e-11 | 42 |
arterial system | 8.49e-11 | 42 |
epithelial tube | 6.61e-09 | 117 |
female gonad | 6.65e-09 | 13 |
right ovary | 7.79e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.30e-12 | 14 |