FFCP PHASE1:Hg19::chr15:39876615..39876625,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:39876615..39876625,- | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_at_chr15:39876615..39876625,- | |||
|id=chr15:39876615..39876625,- | |||
|ontology_enrichment_celltype=CL:0000057!4.31e-19!75;CL:0000055!7.73e-16!180;CL:0002371!2.55e-14!591;CL:0000144!2.97e-12!625;CL:0000548!2.95e-11!679;CL:0000004!2.95e-11!679;CL:0000255!2.95e-11!679;CL:0000012!5.71e-11!682;CL:0000222!4.29e-10!119;CL:0002334!7.52e-10!12;CL:0002139!5.77e-08!24;CL:0000003!6.11e-08!722;CL:0000115!9.52e-08!35;CL:0002620!1.53e-07!23;CL:0002078!5.28e-07!44;CL:0000220!6.16e-07!246;CL:0000723!7.67e-07!436;CL:0002321!9.88e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002580;1.23e-13;3!CL:0002334;1.90e-12;12!CL:0000197;7.49e-12;6!CL:0000098;7.49e-12;6!CL:0002167;7.49e-12;6!CL:0002620;1.88e-10;23!CL:0002617;1.57e-09;2!CL:0002595;6.60e-08;5!CL:0000057;6.13e-07;73!CL:0002579;7.09e-07;3!CL:0000346;9.05e-07;3!CL:1000428;9.05e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.79e-17,76;CL:0002580,7.21e-14,3;CL:0002334,1.84e-12,12;CL:0000197,4.41e-12,6;CL:0000098,4.41e-12,6;CL:0002167,4.41e-12,6;CL:0002620,2.46e-10,23;CL:0002617,1.27e-09,2;CL:0002595,6.70e-08,5;CL:0002579,6.91e-07,3;CL:0000346,9.20e-07,3;CL:1000428,9.20e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;3.93e-14;5!DOID:450;3.93e-14;5!DOID:66;3.93e-14;5!DOID:423;3.93e-14;5!DOID:0080000;3.93e-14;5!DOID:11722;3.93e-14;5!DOID:1192;9.58e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.01e-14,5;DOID:450,5.01e-14,5;DOID:66,5.01e-14,5;DOID:423,5.01e-14,5;DOID:0080000,5.01e-14,5;DOID:11722,5.01e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0000055!1.40e-13!69;UBERON:0002049!1.71e-12!79;UBERON:0007798!1.71e-12!79;UBERON:0001981!5.42e-12!60;UBERON:0007500!5.42e-12!60;UBERON:0004537!5.42e-12!60;UBERON:0006965!5.42e-12!60;UBERON:0001637!2.09e-11!42;UBERON:0003509!2.09e-11!42;UBERON:0004572!2.09e-11!42;UBERON:0004872!5.33e-10!84;UBERON:0004573!6.90e-09!33;UBERON:0004571!6.90e-09!33;UBERON:0004535!8.69e-09!110;UBERON:0001009!3.25e-08!113;UBERON:0003102!6.53e-08!95;UBERON:0002097!7.02e-08!40;UBERON:0002199!7.06e-08!45;UBERON:0002416!7.06e-08!45;UBERON:0000914!2.88e-07!83;UBERON:0002329!2.88e-07!83;UBERON:0003077!2.88e-07!83;UBERON:0003059!2.88e-07!83;UBERON:0007282!2.88e-07!83;UBERON:0009618!2.88e-07!83;UBERON:0007285!2.88e-07!83;UBERON:0000486!6.75e-07!82;UBERON:0000947!8.15e-07!21;UBERON:0010191!8.15e-07!21;UBERON:0000490!9.61e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;1.40e-10;10!UBERON:0001443;1.37e-09;11!UBERON:0003834;6.60e-08;5!UBERON:0001533;6.60e-08;5!UBERON:0002097;8.07e-08;41!UBERON:0002199;3.26e-07;46!UBERON:0002416;3.26e-07;46!UBERON:0000412;9.05e-07;3!UBERON:0001992;9.05e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,9.82e-11,10;UBERON:0002097,4.17e-10,41;UBERON:0001443,9.93e-10,11;UBERON:0002199,8.93e-09,46;UBERON:0002416,8.93e-09,46;UBERON:0003834,6.70e-08,5;UBERON:0001533,6.70e-08,5;UBERON:0000412,9.20e-07,3;UBERON:0001992,9.20e-07,3 | |||
|phase1_expression=2.36181893051724,1.71280419112787,0.986680828671798,0,0.893922188854576,2.61701557230111,0,0,0,0,0,0,0.527533956456907,0,0.331397375727916,1.34465029290355,0.602694528023977,1.46062018077475,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0.697287110717054,0,0,0.28769239232215,0,0,0.689491361473237,0,0,0.376484679085209,0.545812300115692,0,0,0,0,0,0,0,0.870627715885752,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.694281003215189,2.26123176769604,0,1.6507082516404,0.417989933073621,0.258416759169329,0,0,0.805658634218294,0,0.732186172644509,0.367663080345869,4.86085168729056,0.357198913136319,0,0.337834441449967,0,0,0.366403487860815,0,0,0,4.96971951695318,0.12663051166458,0.132409180813219,0.573673241497627,0,0,0,2.4666754841716,0.311211035399766,0.269421344139376,0.326923806226917,0,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0.122834317311768,0.206651562351531,0,2.22540236350701,0,0.718618141816238,0,0,0.277064115484183,0,1.83892677479412,1.65261864797256,0.680593098960126,3.58779271377724,1.06778694409284,1.48352330811693,3.00091096084402,0.206105058476878,1.28820270022815,0.744467425326359,1.0126579934476,0.194874010322397,0.504867548488229,1.19664868234989,0.161646056818812,1.77504796258307,0,0.847802961552438,0.386521706326594,0.545492241181669,0.860413786167011,0,0,0,0,0,0,0,5.78916844373597,1.38134921352481,0.464367928031979,0,0.118306800039844,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0.171567810298526,0.658501712451753,0,0.402115889646523,0,0,0,0,0,0,1.15493158208859,0.925971025153221,0.951270761172991,0.790204397959275,0,0,0,0,0,0.671928512795438,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0.531876233169741,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,2.70362119990049,2.49800584316026,2.52323864054295,1.99140405487612,0.601892199455438,0,0,0,0,0.434418072340414,0,0,0,0,0,0.303127571446259,0,0.907170879989041,1.48864684691266,2.91577749247319,2.52594084989766,0.384417447767103,2.55853624533352,2.41280881715411,0,0.616838775210622,0.355123450626254,0.0821271560138091,1.03850885836724,0.348631135379878,0,0.40101294060657,0,0.114814448164607,0,0,0,0,0,0,0,2.27466768141793,0.510281115829547,0.863663664408557,4.62681758070868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0.15350367472613,0.275673144969061,0.107420244868274,0.145016693914229,0.0852266274161009,0.178064071293475,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0.94443704049192,0,0.308033580176089,0,0,0.9266210955196,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0.243713489631284,1.05650146756755,0,0.282810863907425,0,0,1.99031692572366,1.31535265576129,0.578775534266688,0.655894752046633,0.608731130888112,0.6196469961995,0.563391205064483,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0.670302275535787,0,0.0941438007767792,0,0,0.886860307073351,0.459446800413919,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0.111308705022906,0,0,0,0,0,0.20453736500431,0,1.24415835064723,0.269605053441981,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.174118413160805,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0.262887354279314,0.279282401272254,0,0,0,0,0,0.0671834724867263,2.52209918479682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0.851940108927109,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0.378806010550178,0,0,0,0,0,0,0,0,0,0,0,1.5652351854352,0,0.380805212168795,0,0.363697318405119,0,0.464033759878494,0.398095888698616,0.800055529326307,0.343395705182793,0.336749488765919,0,0,0.214441591374926,0,0.906823702049089,0.231522474323834,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,1.27201740261367,0,0,0.352675943690684,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0.381382095467167,0,0,0,0,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48798007266701,0.924351257262837,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:39876615..39876625,- | |||
}} |
Latest revision as of 01:15, 25 July 2015
Short description: | p@chr15:39876615..39876625, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39876615..39876625, - |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.79e-17 | 76 |
preadipocyte of the breast | 7.21e-14 | 3 |
preadipocyte | 1.84e-12 | 12 |
receptor cell | 4.41e-12 | 6 |
sensory epithelial cell | 4.41e-12 | 6 |
olfactory epithelial cell | 4.41e-12 | 6 |
skin fibroblast | 2.46e-10 | 23 |
adipocyte of breast | 1.27e-09 | 2 |
smooth muscle cell of the subclavian artery | 6.70e-08 | 5 |
omentum preadipocyte | 6.91e-07 | 3 |
hair follicle dermal papilla cell | 9.20e-07 | 3 |
stem cell of epidermis | 9.20e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
breast | 9.82e-11 | 10 |
skin of body | 4.17e-10 | 41 |
chest | 9.93e-10 | 11 |
integument | 8.93e-09 | 46 |
integumental system | 8.93e-09 | 46 |
thoracic segment blood vessel | 6.70e-08 | 5 |
subclavian artery | 6.70e-08 | 5 |
dermal papilla | 9.20e-07 | 3 |
papillary layer of dermis | 9.20e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.01e-14 | 5 |
myotonic disease | 5.01e-14 | 5 |
muscle tissue disease | 5.01e-14 | 5 |
myopathy | 5.01e-14 | 5 |
muscular disease | 5.01e-14 | 5 |
myotonic dystrophy | 5.01e-14 | 5 |