FFCP PHASE1:Hg19::chr15:75940372..75940444,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=257364 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28468 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WV41 | |||
|association_with_transcript=125bp_to_ENST00000308527_5end | |||
|cluster_id=chr15:75940372..75940444,+ | |||
|description=CAGE_peak_4_at_SNX33_5end | |||
|id=chr15:75940372..75940444,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.33e-20!180;CL:0002321!1.58e-12!248;CL:0000220!3.59e-12!246;CL:0000057!1.90e-11!75;CL:0000222!4.67e-08!119;CL:0000192!2.19e-07!42;CL:0000514!2.19e-07!42;CL:0000183!2.72e-07!59;CL:0000680!5.72e-07!57;CL:0000056!5.72e-07!57;CL:0000355!5.72e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.19e-09;32!CL:0000192;6.28e-09;43!CL:0002595;7.39e-07;5!CL:0000077;8.90e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.90e-11,43;CL:0000514,3.90e-11,43;CL:0000359,2.78e-09,32;CL:0000393,3.28e-09,61;CL:0000211,3.28e-09,61;CL:0000680,6.67e-09,58;CL:0000056,6.67e-09,58;CL:0000355,6.67e-09,58;CL:0000187,1.58e-08,55;CL:0000057,3.34e-08,76;CL:0000222,8.64e-08,121;CL:0002595,2.87e-07,5;CL:0000077,4.80e-07,19;CL:0002321,6.18e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;6.28e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.11e-12!365;UBERON:0003102!4.80e-10!95;UBERON:0000914!6.89e-10!83;UBERON:0002329!6.89e-10!83;UBERON:0003077!6.89e-10!83;UBERON:0003059!6.89e-10!83;UBERON:0007282!6.89e-10!83;UBERON:0009618!6.89e-10!83;UBERON:0007285!6.89e-10!83;UBERON:0000486!2.12e-09!82;UBERON:0002100!2.45e-09!216;UBERON:0000481!5.89e-09!347;UBERON:0005256!1.06e-08!143;UBERON:0000468!1.30e-08!659;UBERON:0004290!2.77e-08!70;UBERON:0002385!2.15e-07!63;UBERON:0001015!2.15e-07!63;UBERON:0000383!2.15e-07!63;UBERON:0003104!2.56e-07!238;UBERON:0009142!2.56e-07!238;UBERON:0001134!2.74e-07!61;UBERON:0002036!2.74e-07!61;UBERON:0003082!2.74e-07!61;UBERON:0001637!4.09e-07!42;UBERON:0003509!4.09e-07!42;UBERON:0004572!4.09e-07!42;UBERON:0000119!4.43e-07!312;UBERON:0004573!8.98e-07!33;UBERON:0004571!8.98e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;7.39e-07;5!UBERON:0001533;7.39e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,2.40e-09,71;UBERON:0003059,2.40e-09,71;UBERON:0007282,2.40e-09,71;UBERON:0004290,2.40e-09,71;UBERON:0009618,2.40e-09,71;UBERON:0000486,4.30e-09,83;UBERON:0003077,4.44e-09,72;UBERON:0007285,4.44e-09,72;UBERON:0002385,7.36e-09,64;UBERON:0001015,7.36e-09,64;UBERON:0000383,7.36e-09,64;UBERON:0007524,8.07e-09,73;UBERON:0001134,1.18e-08,62;UBERON:0002036,1.18e-08,62;UBERON:0003082,1.18e-08,62;UBERON:0007503,1.21e-07,78;UBERON:0003834,2.87e-07,5;UBERON:0001533,2.87e-07,5;UBERON:0004573,4.55e-07,33;UBERON:0004571,4.55e-07,33 | |||
|phase1_expression=1.81678379270557,0.428201047781966,1.69145284915165,1.0007329835313,0.893922188854576,1.74467704820074,0,0.631719873426831,1.30592814099919,1.22866968250754,0.697801167972428,0.873765488520689,0.263766978228454,0.74259811776028,0.994192127183747,1.34465029290355,0.602694528023977,2.92124036154949,0,1.10808952269109,1.83600622119828,1.88072832886853,0.85870796139317,0.410623275218653,0.87879847716362,0,0,0,0,0,0,0.919421224478927,2.71085326900425,1.47901604066715,0,0,0,0,0,0,0.223915474239924,0.647787332037959,0.257575567634187,0,0,0,0,0,0,0.28769239232215,0,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0.434377689410233,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,0,2.50668955317945,1.59331170856906,0.795285947051099,1.45990461090791,0.378139268656271,0.665188192387692,0.702678285545008,0.196468613246569,1.82147644146271,1.48313777113772,0,0.522389211897802,0.132957960518865,0,0,0,0.79504962946682,0.860234595106124,0,0.56530794192401,0.419499436209906,0.275118041940067,0.626984899610432,0.516833518338658,0.35576626268671,0.33472061276467,0,0.760272105718513,1.22031028774085,0.735326160691737,0,0.267899184852239,0.22452937262617,0.337834441449967,0,0,0.549605231791222,0,0,0.872188104285069,1.49091585508596,0.633152558322899,1.98613771219828,1.43418310374407,1.06400514659507,1.12135520028461,0,1.97334038733728,0.622422070799533,0.67355336034844,0.653847612453835,1.21085942115945,1.15235184896,0.234321431833797,0.312160076830321,1.71141546463335,1.34503812496621,0.587172493218824,0.485618833104395,0.98315564691574,1.22492502752936,0.61417158655884,0.516628905878827,2.37600571456411,0.741800787835671,0,2.15585442544872,0.505008341862199,0.625592599359821,0.277064115484183,1.31693286264251,0.919463387397059,1.35214253015937,0.453728732640084,0.717558542755448,0.427114777637135,1.27159140695737,2.40072876867522,1.03052529238439,0.772921620136887,0.744467425326359,1.5189869901714,0.194874010322397,1.51460264546469,1.01254888506529,0.484938170456436,0,1.30977727695932,0.847802961552438,1.15956511897978,0.818238361772504,0.860413786167011,0.853815942907168,1.06023814657188,1.2781333715647,0.932949495138334,0.252320850875628,1.45990943630332,0,2.57296375277154,1.38134921352481,0.928735856063958,2.88751792667834,0.591534000199219,0.674338760312407,0,0.330881918197182,0.653638332277218,0.237270619111097,0.269662616320329,0,0.38474715694639,0.738155454624648,1.40241773803446,2.4694440679884,1.47008711385542,0,0,0.590789906681404,0,0.245976877086227,1.3725424823882,1.86575485194663,1.1240175325762,0.703702806881416,0.370353780634118,2.6064664424826,0,1.44331342025273,0.811512834825538,0.587043471179108,0.288732895522148,0,0.380508304469197,0.790204397959275,1.71697232418975,0,0,0.148631162288728,0.93733833986777,1.34385702559088,0.708875486211932,1.16426079513703,0.581267877027924,0.766765358330422,0.985326475791887,0,0.414656231081544,0,0.25248486685276,0.63497894292169,0.763976851116555,2.34434894420094,0,0.616964956219941,0,0.571652865261156,0.897048674762886,0.87192013766656,1.39342743059805,0.517086863031111,0,1.690605505112,1.32969058292435,0,1.02882949704857,4.25547396069835,1.3321108950805,1.57275793023962,1.62786481617433,0.823240336780769,0.977208552881205,0.355391948742546,0,1.50719688529793,1.74306691720059,1.29964888536674,0,0,0,0.718874566474748,1.14861935834114,0,1.01346914667305,1.02738161275192,0.537182889719687,0,0,0,0.128343036279748,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0.981531933753119,0.500170521059677,0.813795071099207,0.415941723061614,0.535286966391485,1.26161932027148,0.702848489956279,0.902838299183157,0,0,1.99267679560631,1.65932251687533,1.04260337361699,1.56640925970192,2.74514739048685,0,0,0,1.21251028578504,1.66435439510497,1.20956117331872,1.73675465473144,2.455391572609,0.841980283299221,2.43464383585832,0.511707249066704,1.76939313257968,2.96836132889982,1.54209693802656,0.532685175939381,0.821271560138091,0,0.929683027679674,0.483437798366489,3.00759705454927,0.460404944679482,1.26295892981067,0.910455840033585,1.70461739447251,0.451199612907412,0.462092022626489,0.784349769176855,0,0.211103257785751,0,0.510281115829547,0.863663664408557,0,0.541892875087706,0.501689773854853,0.254876273045038,0,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0.976135183992909,0,0.0915694648183434,0.41254749960294,1.14853107599234,0,0,1.06337790121334,0.462145851343933,0.767518373630648,0.275673144969061,0.751941714077915,0.435050081742686,0.426133137080504,2.1367688555217,1.32227932288782,2.69066094311149,1.91419068741876,0.910420027699949,0,1.88887408098384,0,1.54016790088044,0.532306030317022,0.869932992075073,1.48259375283136,0.858749320451947,0.372158369359667,0,1.14378116354295,0,2.1396949401696,2.54562598340749,2.35484592059769,0.719489830333259,1.92175920815238,1.17812402345686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| |||
|short_description=p4@SNX33 | |||
}} |
Latest revision as of 04:12, 19 September 2015
Short description: | p4@SNX33 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SNX33_5end |
Coexpression cluster: | NA |
Association with transcript: | 125bp_to_ENST00000308527_5end |
EntrezGene: | SNX33 |
HGNC: | 28468 |
UniProt: | Q8WV41 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.90e-11 | 43 |
smooth muscle myoblast | 3.90e-11 | 43 |
vascular associated smooth muscle cell | 2.78e-09 | 32 |
electrically responsive cell | 3.28e-09 | 61 |
electrically active cell | 3.28e-09 | 61 |
muscle precursor cell | 6.67e-09 | 58 |
myoblast | 6.67e-09 | 58 |
multi-potent skeletal muscle stem cell | 6.67e-09 | 58 |
muscle cell | 1.58e-08 | 55 |
fibroblast | 3.34e-08 | 76 |
mesodermal cell | 8.64e-08 | 121 |
smooth muscle cell of the subclavian artery | 2.87e-07 | 5 |
mesothelial cell | 4.80e-07 | 19 |
embryonic cell | 6.18e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
somite | 2.40e-09 | 71 |
presomitic mesoderm | 2.40e-09 | 71 |
presumptive segmental plate | 2.40e-09 | 71 |
dermomyotome | 2.40e-09 | 71 |
trunk paraxial mesoderm | 2.40e-09 | 71 |
multilaminar epithelium | 4.30e-09 | 83 |
paraxial mesoderm | 4.44e-09 | 72 |
presumptive paraxial mesoderm | 4.44e-09 | 72 |
muscle tissue | 7.36e-09 | 64 |
musculature | 7.36e-09 | 64 |
musculature of body | 7.36e-09 | 64 |
dense mesenchyme tissue | 8.07e-09 | 73 |
skeletal muscle tissue | 1.18e-08 | 62 |
striated muscle tissue | 1.18e-08 | 62 |
myotome | 1.18e-08 | 62 |
epithelial vesicle | 1.21e-07 | 78 |
thoracic segment blood vessel | 2.87e-07 | 5 |
subclavian artery | 2.87e-07 | 5 |
systemic artery | 4.55e-07 | 33 |
systemic arterial system | 4.55e-07 | 33 |